RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 KRTAP1-1Q07627 177 aa3.18□□□□□ -1.9
MATR3-211ENST00000505625 NAV2Q8IVL1 2488 aa3.17□□□□□ -1.9
MATR3-211ENST00000505625 CHD9Q3L8U1 2897 aa3.17□□□□□ -1.9
MATR3-211ENST00000505625 KLK9Q2XQG4 91 aa3.16□□□□□ -1.9
MATR3-211ENST00000505625 H7BZZ5 65 aa3.16□□□□□ -1.9
MATR3-211ENST00000505625 URB1-AS1Q96HZ7 61 aa3.15□□□□□ -1.9
MATR3-211ENST00000505625 CFAP47Q6ZTR5 3102 aa3.15□□□□□ -1.91
MATR3-211ENST00000505625 ABCA12Q86UK0 2595 aa3.15□□□□□ -1.91
MATR3-211ENST00000505625 A0A1B0GW54 56 aa3.15□□□□□ -1.91
MATR3-211ENST00000505625 FLG2Q5D862 2391 aaPredicted RBP3.14□□□□□ -1.91
MATR3-211ENST00000505625 DMAC1Q96GE9 116 aa3.14□□□□□ -1.91
MATR3-211ENST00000505625 FAM229BQ4G0N7 80 aa3.14□□□□□ -1.91
MATR3-211ENST00000505625 ZFHX3Q15911 3703 aa3.14□□□□□ -1.91
MATR3-211ENST00000505625 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
MATR3-211ENST00000505625 A0A096LNT2 108 aa3.13□□□□□ -1.91
MATR3-211ENST00000505625 MYO18BQ8IUG5 2567 aa3.13□□□□□ -1.91
MATR3-211ENST00000505625 LINC01546A6NGU7 62 aa3.13□□□□□ -1.91
MATR3-211ENST00000505625 FP248Q71RG6 208 aaPredicted RBP3.13□□□□□ -1.91
MATR3-211ENST00000505625 CACNA1AO00555 2505 aa3.13□□□□□ -1.91
MATR3-211ENST00000505625 SPRR1BP22528 89 aa3.12□□□□□ -1.91
MATR3-211ENST00000505625 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
MATR3-211ENST00000505625 SPTBN4Q9H254 2564 aa3.12□□□□□ -1.91
MATR3-211ENST00000505625 A8MUU9 505 aa3.1□□□□□ -1.91
MATR3-211ENST00000505625 A0A096LNJ9 63 aa3.1□□□□□ -1.91
MATR3-211ENST00000505625 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
MATR3-211ENST00000505625 TRANK1O15050 2925 aa3.1□□□□□ -1.91
MATR3-211ENST00000505625 CSMD1Q96PZ7 3565 aa3.09□□□□□ -1.91
MATR3-211ENST00000505625 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
MATR3-211ENST00000505625 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
MATR3-211ENST00000505625 H3BS24 57 aa3.09□□□□□ -1.91
MATR3-211ENST00000505625 BSNQ9UPA5 3926 aa3.09□□□□□ -1.91
MATR3-211ENST00000505625 Q8N9P0 234 aaPredicted RBP3.09□□□□□ -1.92
MATR3-211ENST00000505625 MUC3AQ02505 3323 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 POLQO75417 2590 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 FRYLO94915 3013 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 RELNP78509 3460 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 COX8CQ7Z4L0 72 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 SMG1Q96Q15 3661 aaKnown RBP3.08□□□□□ -1.92
MATR3-211ENST00000505625 DMXL1Q9Y485 3027 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 ROMO1P60602 79 aa3.08□□□□□ -1.92
MATR3-211ENST00000505625 MGAQ8IWI9 3026 aa3.07□□□□□ -1.92
MATR3-211ENST00000505625 BOD1L1Q8NFC6 3051 aa3.07□□□□□ -1.92
MATR3-211ENST00000505625 Q8NDZ9 215 aa3.07□□□□□ -1.92
MATR3-211ENST00000505625 AKAP13Q12802 2813 aa3.07□□□□□ -1.92
MATR3-211ENST00000505625 CRYBG3Q68DQ2 2970 aa3.07□□□□□ -1.92
MATR3-211ENST00000505625 CYP4F30PQ9H0H9 118 aa3.07□□□□□ -1.92
MATR3-211ENST00000505625 FASNP49327 2511 aaKnown RBP3.06□□□□□ -1.92
MATR3-211ENST00000505625 Q5W150 140 aa3.06□□□□□ -1.92
MATR3-211ENST00000505625 FRYQ5TBA9 3013 aa3.06□□□□□ -1.92
MATR3-211ENST00000505625 KRTAP1-5Q9BYS1 174 aa3.06□□□□□ -1.92
MATR3-211ENST00000505625 LOC400499M0QZD8 3231 aa3.05□□□□□ -1.92
MATR3-211ENST00000505625 CHD8Q9HCK8 2581 aa3.05□□□□□ -1.92
MATR3-211ENST00000505625 LINC00310P59036 64 aa3.05□□□□□ -1.92
MATR3-211ENST00000505625 VPS13CQ709C8 3753 aa3.04□□□□□ -1.92
MATR3-211ENST00000505625 MTORP42345 2549 aa3.04□□□□□ -1.92
MATR3-211ENST00000505625 C10orf95Q9H7T3 257 aa3.04□□□□□ -1.92
MATR3-211ENST00000505625 ANKRD11Q6UB99 2663 aaPredicted RBP3.04□□□□□ -1.92
MATR3-211ENST00000505625 A0A087X002 238 aa3.03□□□□□ -1.92
MATR3-211ENST00000505625 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
MATR3-211ENST00000505625 EIF4EBP3O60516 100 aaPredicted RBP3.02□□□□□ -1.93
MATR3-211ENST00000505625 USP24Q9UPU5 2620 aa3.01□□□□□ -1.93
MATR3-211ENST00000505625 RPL37P61927 97 aaKnown RBP3.01□□□□□ -1.93
MATR3-211ENST00000505625 SVEP1Q4LDE5 3571 aa3.01□□□□□ -1.93
MATR3-211ENST00000505625 Q6ZR54 194 aa3□□□□□ -1.93
MATR3-211ENST00000505625 ATMQ13315 3056 aa3□□□□□ -1.93
MATR3-211ENST00000505625 COL12A1Q99715 3063 aa3□□□□□ -1.93
MATR3-211ENST00000505625 LRBAP50851 2863 aa3□□□□□ -1.93
MATR3-211ENST00000505625 CSMD2Q7Z408 3487 aa3□□□□□ -1.93
MATR3-211ENST00000505625 CFAP46Q8IYW2 2715 aa3□□□□□ -1.93
MATR3-211ENST00000505625 SMCPP49901 116 aaPredicted RBP3□□□□□ -1.93
MATR3-211ENST00000505625 PANO1I0J062 215 aa2.99□□□□□ -1.93
MATR3-211ENST00000505625 TNP1P09430 55 aa2.99□□□□□ -1.93
MATR3-211ENST00000505625 DMXL2Q8TDJ6 3036 aa2.98□□□□□ -1.93
MATR3-211ENST00000505625 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
MATR3-211ENST00000505625 PRRC2CQ9Y520 2896 aaKnown RBP2.98□□□□□ -1.93
MATR3-211ENST00000505625 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
MATR3-211ENST00000505625 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
MATR3-211ENST00000505625 SPANXA2-OT1Q8N9U9 137 aa2.95□□□□□ -1.94
MATR3-211ENST00000505625 EPG5Q9HCE0 2579 aa2.94□□□□□ -1.94
MATR3-211ENST00000505625 SETD2Q9BYW2 2564 aaPredicted RBP2.93□□□□□ -1.94
MATR3-211ENST00000505625 CEP295Q9C0D2 2601 aa2.93□□□□□ -1.94
MATR3-211ENST00000505625 HECTD1Q9ULT8 2610 aa2.93□□□□□ -1.94
MATR3-211ENST00000505625 ADGRG4Q8IZF6 3080 aa2.93□□□□□ -1.94
MATR3-211ENST00000505625 A8MU10 97 aa2.92□□□□□ -1.94
MATR3-211ENST00000505625 AKAP9Q99996 3911 aa2.91□□□□□ -1.94
MATR3-211ENST00000505625 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
MATR3-211ENST00000505625 Q75L30 129 aa2.91□□□□□ -1.94
MATR3-211ENST00000505625 KRTAP26-1Q6PEX3 210 aa2.91□□□□□ -1.94
MATR3-211ENST00000505625 CUBNO60494 3623 aa2.9□□□□□ -1.94
MATR3-211ENST00000505625 BAHCC1Q9P281 2608 aa2.9□□□□□ -1.95
MATR3-211ENST00000505625 DSPP15924 2871 aaKnown RBP2.9□□□□□ -1.95
MATR3-211ENST00000505625 KRTAP21-3Q3LHN1 58 aa2.89□□□□□ -1.95
MATR3-211ENST00000505625 USP9YO00507 2555 aaPredicted RBP2.88□□□□□ -1.95
MATR3-211ENST00000505625 PRO0461Q9UI25 63 aa2.87□□□□□ -1.95
MATR3-211ENST00000505625 KRTAP4-16G5E9R7 235 aaPredicted RBP2.87□□□□□ -1.95
MATR3-211ENST00000505625 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
MATR3-211ENST00000505625 ITPR3Q14573 2671 aa2.86□□□□□ -1.95
MATR3-211ENST00000505625 MGAM2Q2M2H8 2515 aa2.86□□□□□ -1.95
MATR3-211ENST00000505625 UTP20O75691 2785 aaKnown RBP2.85□□□□□ -1.95
MATR3-211ENST00000505625 NOTCH2NLQ7Z3S9 236 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms