RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.73
ITGA3-204ENST00000505306 GCN1Q92616 2671 aaKnown RBP10.45□□□□□ -0.74
ITGA3-204ENST00000505306 Q1T7F1 81 aa10.45□□□□□ -0.74
ITGA3-204ENST00000505306 FP248Q71RG6 208 aaPredicted RBP10.44□□□□□ -0.74
ITGA3-204ENST00000505306 IGLV5-48A0A075B6I7 105 aa10.42□□□□□ -0.74
ITGA3-204ENST00000505306 SPANXA2-OT1Q8N9U9 137 aa10.42□□□□□ -0.74
ITGA3-204ENST00000505306 Q6ZSA8 131 aa10.41□□□□□ -0.74
ITGA3-204ENST00000505306 FAM229BQ4G0N7 80 aa10.4□□□□□ -0.74
ITGA3-204ENST00000505306 OXTP01178 125 aa10.4□□□□□ -0.74
ITGA3-204ENST00000505306 LCA10Q71F78 164 aa10.4□□□□□ -0.74
ITGA3-204ENST00000505306 LAMA2P24043 3122 aaKnown RBP10.39□□□□□ -0.75
ITGA3-204ENST00000505306 NBEAL1Q6ZS30 2694 aa10.38□□□□□ -0.75
ITGA3-204ENST00000505306 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
ITGA3-204ENST00000505306 CDC42SE1Q9NRR8 79 aa10.36□□□□□ -0.75
ITGA3-204ENST00000505306 TRIOO75962 3097 aa10.34□□□□□ -0.75
ITGA3-204ENST00000505306 UBR5O95071 2799 aaPredicted RBP10.33□□□□□ -0.75
ITGA3-204ENST00000505306 Q5VSD8 79 aa10.33□□□□□ -0.76
ITGA3-204ENST00000505306 KRTAP1-5Q9BYS1 174 aa10.32□□□□□ -0.76
ITGA3-204ENST00000505306 M0R2T5 61 aa10.31□□□□□ -0.76
ITGA3-204ENST00000505306 MAP1AP78559 2803 aaPredicted RBP10.31□□□□□ -0.76
ITGA3-204ENST00000505306 A0A0D9SG42 100 aa10.3□□□□□ -0.76
ITGA3-204ENST00000505306 Q8NDZ9 215 aa10.3□□□□□ -0.76
ITGA3-204ENST00000505306 LINC01554Q52M75 96 aa10.27□□□□□ -0.77
ITGA3-204ENST00000505306 Q8N1X5 172 aa10.27□□□□□ -0.77
ITGA3-204ENST00000505306 XIRP2A4UGR9 3374 aa10.25□□□□□ -0.77
ITGA3-204ENST00000505306 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
ITGA3-204ENST00000505306 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
ITGA3-204ENST00000505306 UNC80Q8N2C7 3258 aa10.21□□□□□ -0.78
ITGA3-204ENST00000505306 Q75L30 129 aa10.2□□□□□ -0.78
ITGA3-204ENST00000505306 Q8N9P0 234 aaPredicted RBP10.19□□□□□ -0.78
ITGA3-204ENST00000505306 ITPR2Q14571 2701 aa10.16□□□□□ -0.78
ITGA3-204ENST00000505306 NSD1Q96L73 2696 aaPredicted RBP10.16□□□□□ -0.78
ITGA3-204ENST00000505306 FRYQ5TBA9 3013 aa10.15□□□□□ -0.78
ITGA3-204ENST00000505306 LUZP6Q538Z0 58 aa10.13□□□□□ -0.79
ITGA3-204ENST00000505306 Q5VV11 94 aa10.13□□□□□ -0.79
ITGA3-204ENST00000505306 STAB2Q8WWQ8 2551 aa10.13□□□□□ -0.79
ITGA3-204ENST00000505306 SPRR1AP35321 89 aa10.1□□□□□ -0.79
ITGA3-204ENST00000505306 REV3LO60673 3130 aa10.1□□□□□ -0.79
ITGA3-204ENST00000505306 FLNCQ14315 2725 aa10.1□□□□□ -0.79
ITGA3-204ENST00000505306 SEC61BP60468 96 aaKnown RBP10.08□□□□□ -0.8
ITGA3-204ENST00000505306 Q6ZR54 194 aa10.08□□□□□ -0.8
ITGA3-204ENST00000505306 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
ITGA3-204ENST00000505306 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
ITGA3-204ENST00000505306 KRTAP21-3Q3LHN1 58 aa10.07□□□□□ -0.8
ITGA3-204ENST00000505306 VPS13AQ96RL7 3174 aa10.07□□□□□ -0.8
ITGA3-204ENST00000505306 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
ITGA3-204ENST00000505306 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
ITGA3-204ENST00000505306 NBEAL2Q6ZNJ1 2754 aa10.05□□□□□ -0.8
ITGA3-204ENST00000505306 MMP24-AS1A0A0U1RRL7 71 aa10.03□□□□□ -0.8
ITGA3-204ENST00000505306 A0A1B0GU33 70 aa10.02□□□□□ -0.81
ITGA3-204ENST00000505306 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
ITGA3-204ENST00000505306 PRAC1Q96KF2 57 aa10.01□□□□□ -0.81
ITGA3-204ENST00000505306 TACC2O95359 2948 aa10.01□□□□□ -0.81
ITGA3-204ENST00000505306 HRES1P13985 223 aa10.01□□□□□ -0.81
ITGA3-204ENST00000505306 SPRR1BP22528 89 aa9.99□□□□□ -0.81
ITGA3-204ENST00000505306 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
ITGA3-204ENST00000505306 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
ITGA3-204ENST00000505306 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
ITGA3-204ENST00000505306 SPINK7P58062 85 aa9.96□□□□□ -0.81
ITGA3-204ENST00000505306 CAMK2N1Q7Z7J9 78 aa9.95□□□□□ -0.82
ITGA3-204ENST00000505306 TENM4Q6N022 2769 aa9.95□□□□□ -0.82
ITGA3-204ENST00000505306 PANO1I0J062 215 aa9.95□□□□□ -0.82
ITGA3-204ENST00000505306 FRYLO94915 3013 aa9.95□□□□□ -0.82
ITGA3-204ENST00000505306 ATMQ13315 3056 aa9.94□□□□□ -0.82
ITGA3-204ENST00000505306 COL12A1Q99715 3063 aa9.94□□□□□ -0.82
ITGA3-204ENST00000505306 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
ITGA3-204ENST00000505306 FREM2Q5SZK8 3169 aa9.93□□□□□ -0.82
ITGA3-204ENST00000505306 LINC00472Q9H8W2 130 aa9.93□□□□□ -0.82
ITGA3-204ENST00000505306 NBEAQ8NFP9 2946 aa9.91□□□□□ -0.82
ITGA3-204ENST00000505306 SZT2Q5T011 3432 aa9.88□□□□□ -0.83
ITGA3-204ENST00000505306 H3BS24 57 aa9.87□□□□□ -0.83
ITGA3-204ENST00000505306 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
ITGA3-204ENST00000505306 S4R3F8 94 aa9.86□□□□□ -0.83
ITGA3-204ENST00000505306 CELSR3Q9NYQ7 3312 aa9.86□□□□□ -0.83
ITGA3-204ENST00000505306 DNAH14Q0VDD8 3507 aa9.86□□□□□ -0.83
ITGA3-204ENST00000505306 KMT2BQ9UMN6 2715 aaPredicted RBP9.81□□□□□ -0.84
ITGA3-204ENST00000505306 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
ITGA3-204ENST00000505306 Q5W150 140 aa9.79□□□□□ -0.84
ITGA3-204ENST00000505306 DMXL2Q8TDJ6 3036 aa9.78□□□□□ -0.84
ITGA3-204ENST00000505306 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
ITGA3-204ENST00000505306 LAMA1P25391 3075 aa9.78□□□□□ -0.84
ITGA3-204ENST00000505306 A0A087X002 238 aa9.77□□□□□ -0.84
ITGA3-204ENST00000505306 UTP20O75691 2785 aaKnown RBP9.77□□□□□ -0.85
ITGA3-204ENST00000505306 VCANP13611 3396 aa9.76□□□□□ -0.85
ITGA3-204ENST00000505306 COL6A3P12111 3177 aa9.76□□□□□ -0.85
ITGA3-204ENST00000505306 KRTAP29-1A8MX34 341 aaPredicted RBP9.75□□□□□ -0.85
ITGA3-204ENST00000505306 CRYBG3Q68DQ2 2970 aa9.75□□□□□ -0.85
ITGA3-204ENST00000505306 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
ITGA3-204ENST00000505306 KALRNO60229 2985 aa9.74□□□□□ -0.85
ITGA3-204ENST00000505306 A0A0A0MQY5 61 aa9.71□□□□□ -0.85
ITGA3-204ENST00000505306 R4GN34 69 aa9.7□□□□□ -0.86
ITGA3-204ENST00000505306 APCP25054 2843 aa9.7□□□□□ -0.86
ITGA3-204ENST00000505306 BOD1L1Q8NFC6 3051 aa9.67□□□□□ -0.86
ITGA3-204ENST00000505306 TNRC18O15417 2968 aaPredicted RBP9.67□□□□□ -0.86
ITGA3-204ENST00000505306 EYSQ5T1H1 3165 aa9.67□□□□□ -0.86
ITGA3-204ENST00000505306 ADGRG4Q8IZF6 3080 aa9.62□□□□□ -0.87
ITGA3-204ENST00000505306 LRBAP50851 2863 aa9.62□□□□□ -0.87
ITGA3-204ENST00000505306 A6NN06 94 aa9.62□□□□□ -0.87
ITGA3-204ENST00000505306 NIPBLQ6KC79 2804 aaeCLIP9.6□□□□□ -0.87
ITGA3-204ENST00000505306 KRTAP11-1Q8IUC1 163 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms