RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 PRO1854Q9UHT4 67 aa14.3□□□□□ -0.12
PVT1-201ENST00000504719 Q6ZQY7 126 aa14.28□□□□□ -0.12
PVT1-201ENST00000504719 A0A0U1RQV1 116 aa14.26□□□□□ -0.13
PVT1-201ENST00000504719 KRTAP13-3Q3SY46 172 aa14.26□□□□□ -0.13
PVT1-201ENST00000504719 PRO1933Q9H354 126 aa14.23□□□□□ -0.13
PVT1-201ENST00000504719 H0YGX0 51 aa14.22□□□□□ -0.13
PVT1-201ENST00000504719 SMIM6P0DI80 62 aa14.22□□□□□ -0.13
PVT1-201ENST00000504719 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.22□□□□□ -0.13
PVT1-201ENST00000504719 K7ERJ3 54 aa14.21□□□□□ -0.13
PVT1-201ENST00000504719 HRCT1Q6UXD1 115 aa14.21□□□□□ -0.13
PVT1-201ENST00000504719 FAM218AQ96MZ4 157 aa14.18□□□□□ -0.14
PVT1-201ENST00000504719 TRIAP1O43715 76 aa14.16□□□□□ -0.14
PVT1-201ENST00000504719 SNCGO76070 127 aa14.16□□□□□ -0.14
PVT1-201ENST00000504719 F8WEM9 126 aa14.15□□□□□ -0.14
PVT1-201ENST00000504719 A0A0G2JQZ4 141 aa14.14□□□□□ -0.15
PVT1-201ENST00000504719 CD164Q04900 197 aa14.13□□□□□ -0.15
PVT1-201ENST00000504719 LOC105371267A0A1B0GV96 52 aa14.12□□□□□ -0.15
PVT1-201ENST00000504719 PPDPFLQ8WWR9 84 aa14.12□□□□□ -0.15
PVT1-201ENST00000504719 PSMB2P49721 201 aa14.11□□□□□ -0.15
PVT1-201ENST00000504719 LIMD2Q9BT23 127 aa14.11□□□□□ -0.15
PVT1-201ENST00000504719 SNHG12Q9BXW3 62 aa14.09□□□□□ -0.15
PVT1-201ENST00000504719 FAT4Q6V0I7 4981 aa14.09□□□□□ -0.15
PVT1-201ENST00000504719 A0A1B0GX51 115 aa14.08□□□□□ -0.16
PVT1-201ENST00000504719 ASB16-AS1Q495Z4 193 aa14.08□□□□□ -0.16
PVT1-201ENST00000504719 OCIAD2Q56VL3 154 aa14.08□□□□□ -0.16
PVT1-201ENST00000504719 CLEC2BQ92478 149 aa14.07□□□□□ -0.16
PVT1-201ENST00000504719 IGLV8-61A0A075B6I0 122 aa14.05□□□□□ -0.16
PVT1-201ENST00000504719 COX6CP09669 75 aa14.03□□□□□ -0.16
PVT1-201ENST00000504719 Q6JHZ5 121 aa14.03□□□□□ -0.16
PVT1-201ENST00000504719 LCE2AQ5TA79 106 aaPredicted RBP14.02□□□□□ -0.17
PVT1-201ENST00000504719 IGFL1Q6UW32 110 aa14.01□□□□□ -0.17
PVT1-201ENST00000504719 M0R143 59 aa14□□□□□ -0.17
PVT1-201ENST00000504719 SEC61BP60468 96 aaKnown RBP14□□□□□ -0.17
PVT1-201ENST00000504719 TSTD3H0UI37 97 aa13.99□□□□□ -0.17
PVT1-201ENST00000504719 XP32Q5T750 250 aa13.99□□□□□ -0.17
PVT1-201ENST00000504719 H3BUT2 72 aa13.98□□□□□ -0.17
PVT1-201ENST00000504719 GHRHP01286 108 aa13.98□□□□□ -0.17
PVT1-201ENST00000504719 Q5XG85 94 aa13.98□□□□□ -0.17
PVT1-201ENST00000504719 DNAL4O96015 105 aa13.97□□□□□ -0.17
PVT1-201ENST00000504719 NDUFV3P56181 108 aaKnown RBP13.97□□□□□ -0.17
PVT1-201ENST00000504719 FABP2P12104 132 aa13.96□□□□□ -0.17
PVT1-201ENST00000504719 SCGB1C2P0DMR2 95 aa13.94□□□□□ -0.18
PVT1-201ENST00000504719 KRTAP4-1Q9BYQ7 146 aa13.93□□□□□ -0.18
PVT1-201ENST00000504719 ORMDL1Q9P0S3 153 aa13.92□□□□□ -0.18
PVT1-201ENST00000504719 TCL1BO95988 128 aa13.9□□□□□ -0.18
PVT1-201ENST00000504719 TRBV7-7A0A0K0K1E9 115 aa13.89□□□□□ -0.19
PVT1-201ENST00000504719 H3BMG7 143 aa13.89□□□□□ -0.19
PVT1-201ENST00000504719 C1orf195Q5TG92 126 aa13.89□□□□□ -0.19
PVT1-201ENST00000504719 H3BQ85 93 aa13.86□□□□□ -0.19
PVT1-201ENST00000504719 LST1O00453 97 aa13.86□□□□□ -0.19
PVT1-201ENST00000504719 TRACP01848 142 aa13.85□□□□□ -0.19
PVT1-201ENST00000504719 C9orf92A6NGG3 77 aa13.84□□□□□ -0.19
PVT1-201ENST00000504719 NAA38Q9BRA0 125 aaKnown RBP13.84□□□□□ -0.19
PVT1-201ENST00000504719 TMEM256-PLSCR3K7ERE1 68 aa13.83□□□□□ -0.2
PVT1-201ENST00000504719 BATFQ16520 125 aa13.83□□□□□ -0.2
PVT1-201ENST00000504719 Q6Q795 121 aa13.8□□□□□ -0.2
PVT1-201ENST00000504719 A0A1B0GV72 72 aa13.79□□□□□ -0.2
PVT1-201ENST00000504719 TEN1Q86WV5 123 aa13.79□□□□□ -0.2
PVT1-201ENST00000504719 UBE2V1Q13404 147 aa13.75□□□□□ -0.21
PVT1-201ENST00000504719 ANKRD29Q8N6D5 301 aa13.73□□□□□ -0.21
PVT1-201ENST00000504719 ATXN8Q156A1 80 aa13.72□□□□□ -0.21
PVT1-201ENST00000504719 PCOTHQ58A44 107 aa13.72□□□□□ -0.21
PVT1-201ENST00000504719 A0A1W2PNM2 257 aa13.71□□□□□ -0.21
PVT1-201ENST00000504719 SS18L2Q9UHA2 77 aa13.71□□□□□ -0.21
PVT1-201ENST00000504719 A0A087WSZ3 146 aa13.7□□□□□ -0.22
PVT1-201ENST00000504719 BAALC-AS2P0C853 105 aa13.7□□□□□ -0.22
PVT1-201ENST00000504719 KRTAP9-2Q9BYQ4 174 aa13.67□□□□□ -0.22
PVT1-201ENST00000504719 LYRM7Q5U5X0 104 aa13.66□□□□□ -0.22
PVT1-201ENST00000504719 TRBV7-4A0A0J9YYF1 115 aa13.63□□□□□ -0.23
PVT1-201ENST00000504719 RBM3P98179 157 aaKnown RBP13.62□□□□□ -0.23
PVT1-201ENST00000504719 C9orf118A6NHY6 69 aa13.61□□□□□ -0.23
PVT1-201ENST00000504719 TAX1BP3O14907 124 aa13.61□□□□□ -0.23
PVT1-201ENST00000504719 CCKP06307 115 aa13.61□□□□□ -0.23
PVT1-201ENST00000504719 TRBV20-1A0A075B6N2 111 aa13.6□□□□□ -0.23
PVT1-201ENST00000504719 RPL37P61927 97 aaKnown RBP13.59□□□□□ -0.23
PVT1-201ENST00000504719 DSCR8Q96T75 97 aa13.58□□□□□ -0.24
PVT1-201ENST00000504719 LCE2CQ5TA81 110 aa13.57□□□□□ -0.24
PVT1-201ENST00000504719 KRTAP19-2Q3LHN2 52 aa13.56□□□□□ -0.24
PVT1-201ENST00000504719 Q96NJ1 140 aa13.56□□□□□ -0.24
PVT1-201ENST00000504719 VPS25Q9BRG1 176 aa13.55□□□□□ -0.24
PVT1-201ENST00000504719 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
PVT1-201ENST00000504719 C9JAW5 83 aa13.53□□□□□ -0.24
PVT1-201ENST00000504719 OBSCN-AS1Q96MR7 158 aa13.5□□□□□ -0.25
PVT1-201ENST00000504719 JMJD7-PLA2G4BH0Y9G9 81 aa13.49□□□□□ -0.25
PVT1-201ENST00000504719 SIGMAR1Q99720 223 aa13.45□□□□□ -0.26
PVT1-201ENST00000504719 IGKV4-1P06312 121 aa13.43□□□□□ -0.26
PVT1-201ENST00000504719 DEFB116Q30KQ4 102 aa13.42□□□□□ -0.26
PVT1-201ENST00000504719 COL5A1-AS1Q5SY13 56 aa13.42□□□□□ -0.26
PVT1-201ENST00000504719 Q6ZQT0 140 aa13.42□□□□□ -0.26
PVT1-201ENST00000504719 LINC00472Q9H8W2 130 aa13.42□□□□□ -0.26
PVT1-201ENST00000504719 LOC110117498A0A087WWA1 95 aa13.41□□□□□ -0.26
PVT1-201ENST00000504719 MT1HP80294 61 aa13.4□□□□□ -0.26
PVT1-201ENST00000504719 MTURNQ8N3F0 131 aa13.4□□□□□ -0.26
PVT1-201ENST00000504719 C14orf132Q9NPU4 83 aa13.4□□□□□ -0.26
PVT1-201ENST00000504719 H3BT86 120 aa13.38□□□□□ -0.27
PVT1-201ENST00000504719 SPCS1Q9Y6A9 102 aa13.38□□□□□ -0.27
PVT1-201ENST00000504719 PCP4L1A6NKN8 68 aa13.37□□□□□ -0.27
PVT1-201ENST00000504719 PDE6GP18545 87 aa13.37□□□□□ -0.27
PVT1-201ENST00000504719 C21orf62-AS1Q17RA5 79 aa13.37□□□□□ -0.27
PVT1-201ENST00000504719 Q75L30 129 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms