RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 C20orf202A1L168 122 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 A4D1N5 150 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 F8WEM9 126 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 PET117Q6UWS5 81 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 SCGB1D4Q6XE38 83 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 TTTY13Q9BZ97 58 aa6.32□□□□□ -1.4
NEDD9-209ENST00000504634 USH2AO75445 5202 aa6.31□□□□□ -1.4
NEDD9-209ENST00000504634 OBSCN-AS1Q96MR7 158 aa6.3□□□□□ -1.4
NEDD9-209ENST00000504634 CFC1P0CG37 223 aa6.29□□□□□ -1.4
NEDD9-209ENST00000504634 LINC01545Q5VT33 79 aa6.29□□□□□ -1.4
NEDD9-209ENST00000504634 C3orf79P0CE67 100 aa6.28□□□□□ -1.4
NEDD9-209ENST00000504634 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-209ENST00000504634 IFITM1P13164 125 aa6.27□□□□□ -1.41
NEDD9-209ENST00000504634 Q75L30 129 aa6.27□□□□□ -1.41
NEDD9-209ENST00000504634 KRTDAPP60985 99 aa6.26□□□□□ -1.41
NEDD9-209ENST00000504634 PYY3Q5JQD4 70 aa6.26□□□□□ -1.41
NEDD9-209ENST00000504634 Q6JHZ5 121 aa6.26□□□□□ -1.41
NEDD9-209ENST00000504634 TRAV13-2A0A0B4J235 113 aa6.25□□□□□ -1.41
NEDD9-209ENST00000504634 TRBV7-7A0A0K0K1E9 115 aa6.25□□□□□ -1.41
NEDD9-209ENST00000504634 VAMP3Q15836 100 aa6.25□□□□□ -1.41
NEDD9-209ENST00000504634 Q6ZVH6 145 aa6.25□□□□□ -1.41
NEDD9-209ENST00000504634 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
NEDD9-209ENST00000504634 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
NEDD9-209ENST00000504634 SCGB1D1O95968 90 aa6.24□□□□□ -1.41
NEDD9-209ENST00000504634 CLEC2BQ92478 149 aa6.24□□□□□ -1.41
NEDD9-209ENST00000504634 HSBP1L1C9JCN9 74 aa6.23□□□□□ -1.41
NEDD9-209ENST00000504634 Q96NJ1 140 aa6.23□□□□□ -1.41
NEDD9-209ENST00000504634 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
NEDD9-209ENST00000504634 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
NEDD9-209ENST00000504634 C12orf57Q99622 126 aa6.22□□□□□ -1.41
NEDD9-209ENST00000504634 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
NEDD9-209ENST00000504634 OCIAD2Q56VL3 154 aa6.21□□□□□ -1.42
NEDD9-209ENST00000504634 Q6ZQY7 126 aa6.21□□□□□ -1.42
NEDD9-209ENST00000504634 hADV29S1A0JD25 119 aa6.2□□□□□ -1.42
NEDD9-209ENST00000504634 LST1O00453 97 aa6.2□□□□□ -1.42
NEDD9-209ENST00000504634 ANKRD39Q53RE8 183 aa6.2□□□□□ -1.42
NEDD9-209ENST00000504634 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
NEDD9-209ENST00000504634 VAMP8Q9BV40 100 aa6.2□□□□□ -1.42
NEDD9-209ENST00000504634 TSTD3H0UI37 97 aa6.18□□□□□ -1.42
NEDD9-209ENST00000504634 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
NEDD9-209ENST00000504634 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
NEDD9-209ENST00000504634 ATOH7Q8N100 152 aa6.17□□□□□ -1.42
NEDD9-209ENST00000504634 DLEU1O43261 78 aa6.16□□□□□ -1.42
NEDD9-209ENST00000504634 SNHG12Q9BXW3 62 aa6.16□□□□□ -1.42
NEDD9-209ENST00000504634 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.42
NEDD9-209ENST00000504634 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
NEDD9-209ENST00000504634 H3BUT2 72 aa6.14□□□□□ -1.43
NEDD9-209ENST00000504634 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
NEDD9-209ENST00000504634 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
NEDD9-209ENST00000504634 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-209ENST00000504634 SS18L2Q9UHA2 77 aa6.14□□□□□ -1.43
NEDD9-209ENST00000504634 A8MUU9 505 aa6.13□□□□□ -1.43
NEDD9-209ENST00000504634 PPDPFLQ8WWR9 84 aa6.13□□□□□ -1.43
NEDD9-209ENST00000504634 UQCR10Q9UDW1 63 aa6.13□□□□□ -1.43
NEDD9-209ENST00000504634 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
NEDD9-209ENST00000504634 MT2AP02795 61 aa6.12□□□□□ -1.43
NEDD9-209ENST00000504634 COX8AP10176 69 aa6.12□□□□□ -1.43
NEDD9-209ENST00000504634 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
NEDD9-209ENST00000504634 BVES-AS1Q5T3Y7 98 aa6.09□□□□□ -1.43
NEDD9-209ENST00000504634 HIGD1BQ9P298 99 aa6.09□□□□□ -1.43
NEDD9-209ENST00000504634 DSCR10P59022 87 aa6.08□□□□□ -1.44
NEDD9-209ENST00000504634 A0A087WSZ3 146 aa6.07□□□□□ -1.44
NEDD9-209ENST00000504634 MT1FP04733 61 aa6.07□□□□□ -1.44
NEDD9-209ENST00000504634 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
NEDD9-209ENST00000504634 TEN1Q86WV5 123 aa6.07□□□□□ -1.44
NEDD9-209ENST00000504634 LCE2BO14633 110 aa6.06□□□□□ -1.44
NEDD9-209ENST00000504634 SNCGO76070 127 aa6.06□□□□□ -1.44
NEDD9-209ENST00000504634 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
NEDD9-209ENST00000504634 C14orf144Q96I85 54 aa6.05□□□□□ -1.44
NEDD9-209ENST00000504634 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
NEDD9-209ENST00000504634 M0R143 59 aa6.03□□□□□ -1.44
NEDD9-209ENST00000504634 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
NEDD9-209ENST00000504634 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.45
NEDD9-209ENST00000504634 NDUFV3P56181 108 aaKnown RBP6.02□□□□□ -1.45
NEDD9-209ENST00000504634 LINC00313P59037 77 aa6.02□□□□□ -1.45
NEDD9-209ENST00000504634 HSD52Q0P140 79 aa6.02□□□□□ -1.45
NEDD9-209ENST00000504634 LINC00846Q9NV44 126 aa6.02□□□□□ -1.45
NEDD9-209ENST00000504634 HIST1H4GQ99525 98 aa6.01□□□□□ -1.45
NEDD9-209ENST00000504634 H3BMG7 143 aa6□□□□□ -1.45
NEDD9-209ENST00000504634 C2orf91Q6ZV80 131 aa6□□□□□ -1.45
NEDD9-209ENST00000504634 TMEM238LA0A1B0GVL6 79 aa5.99□□□□□ -1.45
NEDD9-209ENST00000504634 A6NJY4 79 aa5.99□□□□□ -1.45
NEDD9-209ENST00000504634 HRES1P13985 223 aa5.99□□□□□ -1.45
NEDD9-209ENST00000504634 PCP4L1A6NKN8 68 aa5.98□□□□□ -1.45
NEDD9-209ENST00000504634 GHRHP01286 108 aa5.98□□□□□ -1.45
NEDD9-209ENST00000504634 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
NEDD9-209ENST00000504634 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
NEDD9-209ENST00000504634 H0YGX0 51 aa5.97□□□□□ -1.45
NEDD9-209ENST00000504634 FABP2P12104 132 aa5.97□□□□□ -1.45
NEDD9-209ENST00000504634 MTURNQ8N3F0 131 aa5.97□□□□□ -1.45
NEDD9-209ENST00000504634 RAB37Q96AX2 223 aa5.97□□□□□ -1.45
NEDD9-209ENST00000504634 CEND1Q8N111 149 aa5.96□□□□□ -1.46
NEDD9-209ENST00000504634 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
NEDD9-209ENST00000504634 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
NEDD9-209ENST00000504634 NOTCH2NLQ7Z3S9 236 aa5.94□□□□□ -1.46
NEDD9-209ENST00000504634 COL5A1-AS1Q5SY13 56 aa5.93□□□□□ -1.46
NEDD9-209ENST00000504634 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
NEDD9-209ENST00000504634 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
NEDD9-209ENST00000504634 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms