RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 C4orf3Q8WVX3 66 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 C20orf166-AS1Q96NR2 134 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 XAGE1AQ9HD64 81 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 C6orf48Q9UBA6 75 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 ZNF706Q9Y5V0 76 aaPredicted RBP1.1□□□□□ -2.23
ATXN3-208ENST00000504047 SPENQ96T58 3664 aaKnown RBP1.1□□□□□ -2.23
ATXN3-208ENST00000504047 CEP250Q9BV73 2442 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 CACNA1BQ00975 2339 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 TECTAO75443 2155 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 SDK1Q7Z5N4 2213 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 DMDP11532 3685 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 CELSR3Q9NYQ7 3312 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 A8MWP4 228 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 ANGP03950 147 aaKnown RBP1.09□□□□□ -2.23
ATXN3-208ENST00000504047 CSAG1Q6PB30 78 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 C10orf99Q6UWK7 81 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 Q6ZRX8 168 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 DEFB105AQ8NG35 78 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 PRO0255Q9UI72 69 aa1.09□□□□□ -2.23
ATXN3-208ENST00000504047 DMXL2Q8TDJ6 3036 aa1.09□□□□□ -2.24
ATXN3-208ENST00000504047 MAP1BP46821 2468 aaKnown RBP1.09□□□□□ -2.24
ATXN3-208ENST00000504047 WNK1Q9H4A3 2382 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 CSMD1Q96PZ7 3565 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 ALMS1Q8TCU4 4167 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 CR1P17927 2039 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 SMG1Q96Q15 3661 aaKnown RBP1.08□□□□□ -2.24
ATXN3-208ENST00000504047 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 ROS1P08922 2347 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 MMP24-AS1A0A0U1RRL7 71 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 SPRR1AP35321 89 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 ROMO1P60602 79 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 KRTAP21-3Q3LHN1 58 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 PCOTHQ58A44 107 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 LELP1Q5T871 98 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 C1orf134Q5TEV5 83 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 PRO3102Q9H379 93 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 SORL1Q92673 2214 aa1.08□□□□□ -2.24
ATXN3-208ENST00000504047 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
ATXN3-208ENST00000504047 DSPP15924 2871 aaKnown RBP1.07□□□□□ -2.24
ATXN3-208ENST00000504047 A0A087WSZ3 146 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 A0A096LPF7 62 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 A0A1B0GU69 56 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 UQCR11O14957 56 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 MSMBP08118 114 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 DEFB130BP0DP73 79 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 DEFB130AP0DP74 79 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 RPL37AP61513 92 aaKnown RBP1.07□□□□□ -2.24
ATXN3-208ENST00000504047 MIR22HGQ0VDD5 57 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 DEFB136Q30KP8 78 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 LINC00472Q9H8W2 130 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 PCNX1Q96RV3 2341 aa1.07□□□□□ -2.24
ATXN3-208ENST00000504047 CNOT1A5YKK6 2376 aaKnown RBP1.07□□□□□ -2.24
ATXN3-208ENST00000504047 RP1L1Q8IWN7 2480 aaPredicted RBP1.07□□□□□ -2.24
ATXN3-208ENST00000504047 EP300Q09472 2414 aaPredicted RBP1.06□□□□□ -2.24
ATXN3-208ENST00000504047 ANKHD1Q8IWZ3 2542 aaKnown RBP1.06□□□□□ -2.24
ATXN3-208ENST00000504047 ACYP2P14621 99 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 KRTAP26-1Q6PEX3 210 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 DEFB124Q8NES8 71 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 DMAC1Q96GE9 116 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 BSNQ9UPA5 3926 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 ABCA2Q9BZC7 2435 aa1.06□□□□□ -2.24
ATXN3-208ENST00000504047 ADGRG4Q8IZF6 3080 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 BOD1L1Q8NFC6 3051 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 APC2O95996 2303 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 PTPRZ1P23471 2315 aaPredicted RBP1.05□□□□□ -2.24
ATXN3-208ENST00000504047 EYSQ5T1H1 3165 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 LOC400499M0QZD8 3231 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 A0A1B0GU33 70 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 SPRR1BP22528 89 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 PIEZO2Q9H5I5 2752 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 MUC6Q6W4X9 2439 aa1.05□□□□□ -2.24
ATXN3-208ENST00000504047 DNAH1Q9P2D7 4330 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 AKAP9Q99996 3911 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.04□□□□□ -2.24
ATXN3-208ENST00000504047 CACNA1HO95180 2353 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 NCOR1O75376 2440 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 A0A0G2JQZ4 141 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 H3BNG1 76 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 Q96NJ1 140 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 CCL19Q99731 98 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 MRPL34Q9BQ48 92 aaKnown RBP1.04□□□□□ -2.24
ATXN3-208ENST00000504047 TACC2O95359 2948 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 AKAP6Q13023 2319 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 OTOGLQ3ZCN5 2332 aa1.04□□□□□ -2.24
ATXN3-208ENST00000504047 C2CD3Q4AC94 2353 aa1.03□□□□□ -2.24
ATXN3-208ENST00000504047 LINC01556Q5JQF7 62 aa1.03□□□□□ -2.24
ATXN3-208ENST00000504047 KRTAP4-1Q9BYQ7 146 aa1.03□□□□□ -2.24
ATXN3-208ENST00000504047 AKAP13Q12802 2813 aa1.03□□□□□ -2.24
ATXN3-208ENST00000504047 DCHS2Q6V1P9 2916 aa1.03□□□□□ -2.24
ATXN3-208ENST00000504047 ASPMQ8IZT6 3477 aa1.03□□□□□ -2.24
ATXN3-208ENST00000504047 ZDBF2Q9HCK1 2354 aa1.03□□□□□ -2.25
ATXN3-208ENST00000504047 CEP290O15078 2479 aa1.03□□□□□ -2.25
ATXN3-208ENST00000504047 BAHCC1Q9P281 2608 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 HRNRQ86YZ3 2850 aaPredicted RBP1.02□□□□□ -2.25
ATXN3-208ENST00000504047 PRRC2CQ9Y520 2896 aaKnown RBP1.02□□□□□ -2.25
ATXN3-208ENST00000504047 DMXL1Q9Y485 3027 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 NUPR2A6NF83 97 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 LY6G6CO95867 125 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms