RNA–Protein interactions for RNA: ENST00000503498.1

EFCAB12-202, Transcript of EF-hand calcium binding domain 12, humanhuman

TSL 2

Gene EFCAB12, Length 5,607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12-202ENST00000503498 F8P00451 2351 aa6.57□□□□□ -1.36
EFCAB12-202ENST00000503498 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
EFCAB12-202ENST00000503498 FN1P02751 2386 aaKnown RBP6.56□□□□□ -1.36
EFCAB12-202ENST00000503498 ZFYVE26Q68DK2 2539 aa6.55□□□□□ -1.36
EFCAB12-202ENST00000503498 KRTAP24-1Q3LI83 254 aa6.55□□□□□ -1.36
EFCAB12-202ENST00000503498 LRRK2Q5S007 2527 aa6.54□□□□□ -1.36
EFCAB12-202ENST00000503498 HTTP42858 3142 aa6.54□□□□□ -1.36
EFCAB12-202ENST00000503498 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
EFCAB12-202ENST00000503498 A0A0C4DFX4 3053 aa6.54□□□□□ -1.36
EFCAB12-202ENST00000503498 CHD7Q9P2D1 2997 aa6.54□□□□□ -1.36
EFCAB12-202ENST00000503498 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
EFCAB12-202ENST00000503498 K7EIL1 84 aa6.53□□□□□ -1.36
EFCAB12-202ENST00000503498 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
EFCAB12-202ENST00000503498 JMJD1CQ15652 2540 aa6.52□□□□□ -1.37
EFCAB12-202ENST00000503498 KRTAP10-11P60412 298 aa6.52□□□□□ -1.37
EFCAB12-202ENST00000503498 MTORP42345 2549 aa6.52□□□□□ -1.37
EFCAB12-202ENST00000503498 BPTFQ12830 3046 aa6.49□□□□□ -1.37
EFCAB12-202ENST00000503498 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
EFCAB12-202ENST00000503498 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
EFCAB12-202ENST00000503498 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
EFCAB12-202ENST00000503498 POLQO75417 2590 aa6.45□□□□□ -1.38
EFCAB12-202ENST00000503498 MKI67P46013 3256 aaKnown RBP6.44□□□□□ -1.38
EFCAB12-202ENST00000503498 LCE6AA0A183 80 aa6.43□□□□□ -1.38
EFCAB12-202ENST00000503498 TNP1P09430 55 aa6.43□□□□□ -1.38
EFCAB12-202ENST00000503498 PCSK5Q92824 1860 aa6.43□□□□□ -1.38
EFCAB12-202ENST00000503498 CHD9Q3L8U1 2897 aa6.42□□□□□ -1.38
EFCAB12-202ENST00000503498 LAMA3Q16787 3333 aa6.41□□□□□ -1.38
EFCAB12-202ENST00000503498 C5orf42Q9H799 3197 aa6.41□□□□□ -1.38
EFCAB12-202ENST00000503498 BRCA2P51587 3418 aa6.39□□□□□ -1.39
EFCAB12-202ENST00000503498 COL4A2P08572 1712 aa6.38□□□□□ -1.39
EFCAB12-202ENST00000503498 ACANP16112 2415 aa6.36□□□□□ -1.39
EFCAB12-202ENST00000503498 P0C880 135 aa6.34□□□□□ -1.39
EFCAB12-202ENST00000503498 TRANK1O15050 2925 aa6.32□□□□□ -1.4
EFCAB12-202ENST00000503498 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
EFCAB12-202ENST00000503498 TRIOO75962 3097 aa6.31□□□□□ -1.4
EFCAB12-202ENST00000503498 KRTAP10-3P60369 221 aa6.31□□□□□ -1.4
EFCAB12-202ENST00000503498 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
EFCAB12-202ENST00000503498 FASNP49327 2511 aaKnown RBP6.3□□□□□ -1.4
EFCAB12-202ENST00000503498 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
EFCAB12-202ENST00000503498 UNC80Q8N2C7 3258 aa6.29□□□□□ -1.4
EFCAB12-202ENST00000503498 CFAP54Q96N23 3096 aa6.28□□□□□ -1.4
EFCAB12-202ENST00000503498 ANKRD17O75179 2603 aaKnown RBP6.28□□□□□ -1.4
EFCAB12-202ENST00000503498 PRUNE2Q8WUY3 3088 aa6.28□□□□□ -1.4
EFCAB12-202ENST00000503498 CENPEQ02224 2701 aa6.22□□□□□ -1.41
EFCAB12-202ENST00000503498 WDFY4Q6ZS81 3184 aa6.16□□□□□ -1.42
EFCAB12-202ENST00000503498 XIRP2A4UGR9 3374 aa6.15□□□□□ -1.42
EFCAB12-202ENST00000503498 VPS13AQ96RL7 3174 aa6.14□□□□□ -1.43
EFCAB12-202ENST00000503498 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
EFCAB12-202ENST00000503498 USP24Q9UPU5 2620 aa6.12□□□□□ -1.43
EFCAB12-202ENST00000503498 Q5VSD8 79 aa6.12□□□□□ -1.43
EFCAB12-202ENST00000503498 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
EFCAB12-202ENST00000503498 MGAQ8IWI9 3026 aa6.12□□□□□ -1.43
EFCAB12-202ENST00000503498 ZNF292O60281 2723 aa6.09□□□□□ -1.43
EFCAB12-202ENST00000503498 FLNBO75369 2602 aaKnown RBP6.09□□□□□ -1.44
EFCAB12-202ENST00000503498 MAP1AP78559 2803 aaPredicted RBP6.08□□□□□ -1.44
EFCAB12-202ENST00000503498 CDH23Q9H251 3354 aa6.08□□□□□ -1.44
EFCAB12-202ENST00000503498 H0YAA0 97 aa6.07□□□□□ -1.44
EFCAB12-202ENST00000503498 USP34Q70CQ2 3546 aa6.07□□□□□ -1.44
EFCAB12-202ENST00000503498 DSPP15924 2871 aaKnown RBP6.06□□□□□ -1.44
EFCAB12-202ENST00000503498 NBEAQ8NFP9 2946 aa6.05□□□□□ -1.44
EFCAB12-202ENST00000503498 AKAP13Q12802 2813 aa6.05□□□□□ -1.44
EFCAB12-202ENST00000503498 LAMA1P25391 3075 aa6.02□□□□□ -1.45
EFCAB12-202ENST00000503498 KRTAP10-1P60331 282 aa6.01□□□□□ -1.45
EFCAB12-202ENST00000503498 FLNAP21333 2647 aaKnown RBP6.01□□□□□ -1.45
EFCAB12-202ENST00000503498 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
EFCAB12-202ENST00000503498 HECTD1Q9ULT8 2610 aa6□□□□□ -1.45
EFCAB12-202ENST00000503498 ATRQ13535 2644 aa5.99□□□□□ -1.45
EFCAB12-202ENST00000503498 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
EFCAB12-202ENST00000503498 FRYQ5TBA9 3013 aa5.98□□□□□ -1.45
EFCAB12-202ENST00000503498 VCANP13611 3396 aa5.97□□□□□ -1.45
EFCAB12-202ENST00000503498 CHD6Q8TD26 2715 aa5.97□□□□□ -1.45
EFCAB12-202ENST00000503498 ITPR3Q14573 2671 aa5.96□□□□□ -1.45
EFCAB12-202ENST00000503498 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
EFCAB12-202ENST00000503498 SZT2Q5T011 3432 aa5.96□□□□□ -1.46
EFCAB12-202ENST00000503498 CFAP46Q8IYW2 2715 aa5.93□□□□□ -1.46
EFCAB12-202ENST00000503498 MAST4O15021 2626 aa5.93□□□□□ -1.46
EFCAB12-202ENST00000503498 Q6ZRN7 208 aaPredicted RBP5.93□□□□□ -1.46
EFCAB12-202ENST00000503498 KRTAP10-2P60368 255 aa5.93□□□□□ -1.46
EFCAB12-202ENST00000503498 FREM2Q5SZK8 3169 aa5.89□□□□□ -1.47
EFCAB12-202ENST00000503498 CELSR3Q9NYQ7 3312 aa5.89□□□□□ -1.47
EFCAB12-202ENST00000503498 FRYLO94915 3013 aa5.87□□□□□ -1.47
EFCAB12-202ENST00000503498 DNAH14Q0VDD8 3507 aa5.86□□□□□ -1.47
EFCAB12-202ENST00000503498 GCN1Q92616 2671 aaKnown RBP5.86□□□□□ -1.47
EFCAB12-202ENST00000503498 INE1O15225 51 aa5.85□□□□□ -1.47
EFCAB12-202ENST00000503498 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
EFCAB12-202ENST00000503498 HELZ2Q9BYK8 2649 aaKnown RBP5.84□□□□□ -1.47
EFCAB12-202ENST00000503498 KRTAP1-3Q8IUG1 177 aa5.84□□□□□ -1.47
EFCAB12-202ENST00000503498 UNC79Q9P2D8 2635 aa5.83□□□□□ -1.48
EFCAB12-202ENST00000503498 KRTAP13-2Q52LG2 175 aa5.83□□□□□ -1.48
EFCAB12-202ENST00000503498 SPEGQ15772 3267 aa5.83□□□□□ -1.48
EFCAB12-202ENST00000503498 ADGRG4Q8IZF6 3080 aa5.82□□□□□ -1.48
EFCAB12-202ENST00000503498 KALRNO60229 2985 aa5.82□□□□□ -1.48
EFCAB12-202ENST00000503498 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
EFCAB12-202ENST00000503498 FLNCQ14315 2725 aa5.81□□□□□ -1.48
EFCAB12-202ENST00000503498 BOD1L1Q8NFC6 3051 aa5.8□□□□□ -1.48
EFCAB12-202ENST00000503498 NBEAL2Q6ZNJ1 2754 aa5.78□□□□□ -1.48
EFCAB12-202ENST00000503498 KRTAP7-1Q8IUC3 87 aa5.77□□□□□ -1.49
EFCAB12-202ENST00000503498 NOTCH1P46531 2555 aa5.77□□□□□ -1.49
EFCAB12-202ENST00000503498 TEX15Q9BXT5 2789 aa5.75□□□□□ -1.49
EFCAB12-202ENST00000503498 UBR5O95071 2799 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms