RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CIRBPQ14011 172 aaKnown RBP2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 SERP2Q8N6R1 65 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 DSCR8Q96T75 97 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 ABCA13Q86UQ4 5058 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 SNRPGP15A8MWD9 76 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 UMAD1C9J7I0 102 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 FAUP35544 74 aaKnown RBP2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 ETDBQ3ZM63 59 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 NMSQ5H8A3 153 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 GDF5OSQ5U4N7 250 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 PATE2Q6UY27 113 aa2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 MRPL35Q9NZE8 188 aaKnown RBP2.01□□□□□ -2.09
HMGB1P3-201ENST00000502802 FAT1Q14517 4588 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SRRM2Q9UQ35 2752 aaKnown RBP2□□□□□ -2.09
HMGB1P3-201ENST00000502802 DEFB131BA0A096LNP1 70 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 CRYM-AS1A6NIL9 109 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 CEBPZOSA8MTT3 80 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 H3BUT2 72 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 M0R2N4 97 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SPANXN1Q5VSR9 72 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2□□□□□ -2.09
HMGB1P3-201ENST00000502802 Q8N8P6 123 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 TMEM254Q8TBM7 123 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 SMIM4Q8WVI0 70 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 VPS13BQ7Z7G8 4022 aa2□□□□□ -2.09
HMGB1P3-201ENST00000502802 HERC1Q15751 4861 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGHV1-24A0A0C4DH33 117 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 A6NN06 94 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 A8MTW9 85 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 F2Z2F3 143 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 CCKP06307 115 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 SPART-AS1P0CW21 52 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 SMIM13P0DJ93 91 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 ROMO1P60602 79 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 WFDC2Q14508 124 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 CFAP126Q5VTH2 177 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 UNQ6190/PRO20217Q6UXQ8 127 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 LINC00643Q86TS7 51 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 FAM213BQ8TBF2 198 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 CLEC2BQ92478 149 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 RETNLBQ9BQ08 111 aa1.99□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 hADV29S1A0JD25 119 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 NUPR1O60356 82 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 IAPPP10997 89 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 HTN3P15516 51 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 C1orf137Q5JT78 98 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 TMEM170BQ5T4T1 132 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 CHCHD1Q96BP2 118 aaKnown RBP1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 SMIM7Q9BQ49 75 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 CYP4F30PQ9H0H9 118 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 V9GYH0 126 aa1.98□□□□□ -2.09
HMGB1P3-201ENST00000502802 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 DNAH8Q96JB1 4490 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 PRB4P10163 310 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 UBE2G1P62253 170 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 RHOHQ15669 191 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 SPINK13Q1W4C9 94 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 UBE2DNLQ8IWF7 75 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 TMEM141Q96I45 108 aa1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 NXT2Q9NPJ8 142 aaKnown RBP1.97□□□□□ -2.09
HMGB1P3-201ENST00000502802 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRAV13-2A0A0B4J235 113 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 NBDYA0A0U1RRE5 68 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 DEFB130BP0DP73 79 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 DEFB130AP0DP74 79 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 C1orf134Q5TEV5 83 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 RPL7L1Q6DKI1 246 aaKnown RBP1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 CYP2G1PQ6ZSU1 146 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 HIGD1BQ9P298 99 aa1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 FLG2Q5D862 2391 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P3-201ENST00000502802 DMBT1Q9UGM3 2413 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 COX8AP10176 69 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 HTN1P15515 57 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 TOMM5Q8N4H5 51 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 ODF3Q96PU9 254 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 NOP10Q9NPE3 64 aaKnown RBP1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 PSENENQ9NZ42 101 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 TIMM8BQ9Y5J9 83 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 SNURFQ9Y675 71 aa1.95□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRBV7-3A0A075B6L6 115 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 A0A0J9YY99 117 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 CCL18P55774 89 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 RBM3P98179 157 aaKnown RBP1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 LINC00269Q8N2A0 174 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 TMEM263Q8WUH6 116 aaKnown RBP1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 FAM167A-AS1Q96KT0 104 aa1.94□□□□□ -2.1
HMGB1P3-201ENST00000502802 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 A0A087WSZ3 146 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 IGKV2-40A0A087WW87 121 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 A0A096LPF7 62 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 IGKV2D-26A0A0A0MRZ7 120 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRAV12-3A0A0B4J271 114 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms