RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 PSMB2P49721 201 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 PRR4Q16378 134 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 Q1RN00 199 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 SPAG11AQ6PDA7 123 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 GTF2H5Q6ZYL4 71 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 DEFB105AQ8NG35 78 aa4.23□□□□□ -1.73
USP46-203ENST00000502443 SLC25A20O43772 301 aa4.22□□□□□ -1.73
USP46-203ENST00000502443 SPRR1BP22528 89 aa4.22□□□□□ -1.73
USP46-203ENST00000502443 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
USP46-203ENST00000502443 SSBP3-AS1Q7Z2R9 100 aa4.22□□□□□ -1.73
USP46-203ENST00000502443 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
USP46-203ENST00000502443 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
USP46-203ENST00000502443 H3BMG7 143 aa4.21□□□□□ -1.74
USP46-203ENST00000502443 LYRM7Q5U5X0 104 aa4.21□□□□□ -1.74
USP46-203ENST00000502443 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
USP46-203ENST00000502443 LAMTOR3Q9UHA4 124 aa4.21□□□□□ -1.74
USP46-203ENST00000502443 PRO0461Q9UI25 63 aa4.21□□□□□ -1.74
USP46-203ENST00000502443 TRBV20-1A0A075B6N2 111 aa4.2□□□□□ -1.74
USP46-203ENST00000502443 SPINK1P00995 79 aa4.2□□□□□ -1.74
USP46-203ENST00000502443 COX6CP09669 75 aa4.2□□□□□ -1.74
USP46-203ENST00000502443 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
USP46-203ENST00000502443 CLEC2BQ92478 149 aa4.2□□□□□ -1.74
USP46-203ENST00000502443 IGLV5-48A0A075B6I7 105 aa4.19□□□□□ -1.74
USP46-203ENST00000502443 hADV29S1A0JD25 119 aa4.19□□□□□ -1.74
USP46-203ENST00000502443 LST1O00453 97 aa4.19□□□□□ -1.74
USP46-203ENST00000502443 FAM218AQ96MZ4 157 aa4.19□□□□□ -1.74
USP46-203ENST00000502443 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
USP46-203ENST00000502443 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
USP46-203ENST00000502443 Q6ZQY7 126 aa4.18□□□□□ -1.74
USP46-203ENST00000502443 F8W1H4 67 aa4.17□□□□□ -1.74
USP46-203ENST00000502443 H0YGX0 51 aa4.17□□□□□ -1.74
USP46-203ENST00000502443 HRCT1Q6UXD1 115 aa4.17□□□□□ -1.74
USP46-203ENST00000502443 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
USP46-203ENST00000502443 Q8N377 158 aa4.17□□□□□ -1.74
USP46-203ENST00000502443 MTURNQ8N3F0 131 aa4.17□□□□□ -1.74
USP46-203ENST00000502443 C9JAW5 83 aa4.16□□□□□ -1.74
USP46-203ENST00000502443 SNCGO76070 127 aa4.16□□□□□ -1.74
USP46-203ENST00000502443 TRACP01848 142 aa4.16□□□□□ -1.74
USP46-203ENST00000502443 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
USP46-203ENST00000502443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.16□□□□□ -1.74
USP46-203ENST00000502443 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
USP46-203ENST00000502443 F8WEM9 126 aa4.15□□□□□ -1.75
USP46-203ENST00000502443 LRP2P98164 4655 aa4.14□□□□□ -1.75
USP46-203ENST00000502443 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
USP46-203ENST00000502443 LPAP08519 4548 aa4.13□□□□□ -1.75
USP46-203ENST00000502443 A0A1B0GX51 115 aa4.13□□□□□ -1.75
USP46-203ENST00000502443 CD164Q04900 197 aa4.13□□□□□ -1.75
USP46-203ENST00000502443 ETDBQ3ZM63 59 aa4.13□□□□□ -1.75
USP46-203ENST00000502443 FP248Q71RG6 208 aaPredicted RBP4.13□□□□□ -1.75
USP46-203ENST00000502443 ANKRD29Q8N6D5 301 aa4.13□□□□□ -1.75
USP46-203ENST00000502443 PPDPFLQ8WWR9 84 aa4.13□□□□□ -1.75
USP46-203ENST00000502443 H3BT86 120 aa4.12□□□□□ -1.75
USP46-203ENST00000502443 BAALC-AS2P0C853 105 aa4.12□□□□□ -1.75
USP46-203ENST00000502443 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
USP46-203ENST00000502443 OCIAD2Q56VL3 154 aa4.12□□□□□ -1.75
USP46-203ENST00000502443 LIMD2Q9BT23 127 aa4.12□□□□□ -1.75
USP46-203ENST00000502443 CDIP1Q9H305 208 aa4.12□□□□□ -1.75
USP46-203ENST00000502443 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
USP46-203ENST00000502443 TEN1Q86WV5 123 aa4.11□□□□□ -1.75
USP46-203ENST00000502443 IGLV8-61A0A075B6I0 122 aa4.1□□□□□ -1.75
USP46-203ENST00000502443 GHRHP01286 108 aa4.1□□□□□ -1.75
USP46-203ENST00000502443 Q6JHZ5 121 aa4.1□□□□□ -1.75
USP46-203ENST00000502443 DNAL4O96015 105 aa4.09□□□□□ -1.75
USP46-203ENST00000502443 NDUFV3P56181 108 aaKnown RBP4.09□□□□□ -1.75
USP46-203ENST00000502443 IGFL1Q6UW32 110 aa4.09□□□□□ -1.75
USP46-203ENST00000502443 KRTAP13-3Q3SY46 172 aa4.08□□□□□ -1.76
USP46-203ENST00000502443 Q5XG85 94 aa4.08□□□□□ -1.76
USP46-203ENST00000502443 ORMDL1Q9P0S3 153 aa4.08□□□□□ -1.76
USP46-203ENST00000502443 OBSCN-AS1Q96MR7 158 aa4.07□□□□□ -1.76
USP46-203ENST00000502443 TRBV7-7A0A0K0K1E9 115 aa4.06□□□□□ -1.76
USP46-203ENST00000502443 K7ERU9 68 aa4.06□□□□□ -1.76
USP46-203ENST00000502443 H3BQ85 93 aa4.05□□□□□ -1.76
USP46-203ENST00000502443 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
USP46-203ENST00000502443 C1orf195Q5TG92 126 aa4.05□□□□□ -1.76
USP46-203ENST00000502443 A0A1B0GV72 72 aa4.04□□□□□ -1.76
USP46-203ENST00000502443 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
USP46-203ENST00000502443 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
USP46-203ENST00000502443 J3QR89 54 aa4.03□□□□□ -1.76
USP46-203ENST00000502443 Q6Q795 121 aa4.03□□□□□ -1.76
USP46-203ENST00000502443 ASB16-AS1Q495Z4 193 aa4.02□□□□□ -1.77
USP46-203ENST00000502443 C14orf132Q9NPU4 83 aa4.02□□□□□ -1.77
USP46-203ENST00000502443 JMJD7-PLA2G4BH0Y9G9 81 aa4.01□□□□□ -1.77
USP46-203ENST00000502443 XP32Q5T750 250 aa4.01□□□□□ -1.77
USP46-203ENST00000502443 SS18L2Q9UHA2 77 aa4.01□□□□□ -1.77
USP46-203ENST00000502443 A0A087WSZ3 146 aa4□□□□□ -1.77
USP46-203ENST00000502443 A0A1W2PNM2 257 aa4□□□□□ -1.77
USP46-203ENST00000502443 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
USP46-203ENST00000502443 LOC110117498A0A087WWA1 95 aa3.99□□□□□ -1.77
USP46-203ENST00000502443 TRBV7-4A0A0J9YYF1 115 aa3.99□□□□□ -1.77
USP46-203ENST00000502443 FAM240AA0A1B0GVK7 77 aa3.99□□□□□ -1.77
USP46-203ENST00000502443 CCKP06307 115 aa3.99□□□□□ -1.77
USP46-203ENST00000502443 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
USP46-203ENST00000502443 Q6ZQT0 140 aa3.99□□□□□ -1.77
USP46-203ENST00000502443 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
USP46-203ENST00000502443 ACYP1P07311 99 aa3.97□□□□□ -1.77
USP46-203ENST00000502443 VPS25Q9BRG1 176 aa3.97□□□□□ -1.77
USP46-203ENST00000502443 A0A0U1RQV1 116 aa3.96□□□□□ -1.78
USP46-203ENST00000502443 PDE6GP18545 87 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms