RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 LINC01556Q5JQF7 62 aa-0.97□□□□□ -2.56
SMC4-227ENST00000497984 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.97□□□□□ -2.56
SMC4-227ENST00000497984 LINC00470Q9BZP3 86 aa-0.97□□□□□ -2.56
SMC4-227ENST00000497984 LINC00474Q9P2X8 69 aa-0.97□□□□□ -2.56
SMC4-227ENST00000497984 PATJQ8NI35 1801 aa-0.97□□□□□ -2.56
SMC4-227ENST00000497984 NRKQ7Z2Y5 1582 aa-0.97□□□□□ -2.56
SMC4-227ENST00000497984 KIF14Q15058 1648 aa-0.97□□□□□ -2.57
SMC4-227ENST00000497984 ANKRD26Q9UPS8 1709 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 KDM5DQ9BY66 1539 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 DIP2AQ14689 1571 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 DEFB131BA0A096LNP1 70 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 SELENOWP63302 87 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 TDRG1Q3Y452 100 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 MRPL54Q6P161 138 aaKnown RBP-0.98□□□□□ -2.57
SMC4-227ENST00000497984 DEFB124Q8NES8 71 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 TMEM263Q8WUH6 116 aaKnown RBP-0.98□□□□□ -2.57
SMC4-227ENST00000497984 ARL11Q969Q4 196 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 PPP3R2Q96LZ3 170 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 PAIP2BQ9ULR5 123 aaKnown RBP-0.98□□□□□ -2.57
SMC4-227ENST00000497984 MYH8P13535 1937 aa-0.98□□□□□ -2.57
SMC4-227ENST00000497984 RRBP1Q9P2E9 1410 aaKnown RBP-0.98□□□□□ -2.57
SMC4-227ENST00000497984 MAPKBP1O60336 1514 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 EFCAB6Q5THR3 1501 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 CC2D2AQ9P2K1 1620 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 KIF1AQ12756 1690 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 LOC285095A0A1B0GVY8 99 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 FAM25AB3EWG3 89 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 FAM25CB3EWG5 89 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 FAM25GB3EWG6 89 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 HTN1P15515 57 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 Q56UQ5 140 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 C10orf113Q5VZT2 155 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 ROCK2O75116 1388 aaKnown RBP-0.99□□□□□ -2.57
SMC4-227ENST00000497984 ATP7BP35670 1465 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 ERICH3Q5RHP9 1530 aa-0.99□□□□□ -2.57
SMC4-227ENST00000497984 PREX1Q8TCU6 1659 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 ITSN2Q9NZM3 1697 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 FAM208AQ9UK61 1670 aaKnown RBP-1□□□□□ -2.57
SMC4-227ENST00000497984 RICTORQ6R327 1708 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 UBE2L5PA0A1B0GUS4 154 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 LOC100130705A0A1B0GUX0 176 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 CHKB-CPT1BH3BT56 60 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 STATHP02808 62 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 MGPP08493 103 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 IGLC1P0CG04 106 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 DEFB130BP0DP73 79 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 DEFB130AP0DP74 79 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 CATR1Q13166 79 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 COMMD6Q7Z4G1 85 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 DEFB106AQ8N104 65 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 MYOZ3Q8TDC0 251 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 PLIN4Q96Q06 1357 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 LRRC9Q6ZRR7 1453 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 NLRP1Q9C000 1473 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 ABCC3O15438 1527 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 LMTK2Q8IWU2 1503 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 UGGT1Q9NYU2 1555 aa-1□□□□□ -2.57
SMC4-227ENST00000497984 DDX60Q8IY21 1712 aaKnown RBP-1.01□□□□□ -2.57
SMC4-227ENST00000497984 H3BSH0 61 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 NDUFC1O43677 76 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 SFTA3P0C7M3 94 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 BTG2P78543 158 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 NXT2Q9NPJ8 142 aaKnown RBP-1.01□□□□□ -2.57
SMC4-227ENST00000497984 CDC42SE2Q9NRR3 84 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.01□□□□□ -2.57
SMC4-227ENST00000497984 ABCC6O95255 1503 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 DIP2BQ9P265 1576 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 MYO3AQ8NEV4 1616 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 NHSQ6T4R5 1651 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 CFAP43Q8NDM7 1665 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 MYH4Q9Y623 1939 aa-1.01□□□□□ -2.57
SMC4-227ENST00000497984 A0A096LNI7 61 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 M0QY20 66 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 NDUFA2O43678 99 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 NWD1Q149M9 1564 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 CCDC141Q6ZP82 1450 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 RALGAPBQ86X10 1494 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 C8orf59Q8N0T1 100 aaPredicted RBP-1.02□□□□□ -2.57
SMC4-227ENST00000497984 FAIMQ9NVQ4 179 aa-1.02□□□□□ -2.57
SMC4-227ENST00000497984 FOCADQ5VW36 1801 aa-1.03□□□□□ -2.57
SMC4-227ENST00000497984 C5P01031 1676 aa-1.03□□□□□ -2.57
SMC4-227ENST00000497984 ABCA8O94911 1581 aa-1.03□□□□□ -2.57
SMC4-227ENST00000497984 A2ML1A8K2U0 1454 aa-1.03□□□□□ -2.57
SMC4-227ENST00000497984 APOC2P02655 101 aa-1.03□□□□□ -2.57
SMC4-227ENST00000497984 RPS27P42677 84 aaKnown RBP-1.03□□□□□ -2.57
SMC4-227ENST00000497984 LTN1O94822 1766 aa-1.03□□□□□ -2.58
SMC4-227ENST00000497984 INO80Q9ULG1 1556 aaPredicted RBP-1.04□□□□□ -2.58
SMC4-227ENST00000497984 I3L3M4 83 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 HTN3P15516 51 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 WHAMMP3Q1A5X7 153 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 WFDC10BQ8IUB3 73 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 RHPN1-AS1Q9BWJ2 59 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 PRO1933Q9H354 126 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 NOP10Q9NPE3 64 aaKnown RBP-1.04□□□□□ -2.58
SMC4-227ENST00000497984 CDKN2A-AS1Q9UH64 79 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 ARL2-SNX15V9GYD0 113 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 SCN11AQ9UI33 1791 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 UNC13AQ9UPW8 1703 aa-1.04□□□□□ -2.58
SMC4-227ENST00000497984 TARBP1Q13395 1621 aaKnown RBP-1.04□□□□□ -2.58
SMC4-227ENST00000497984 EPRSP07814 1512 aaKnown RBP-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms