RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SMIM20Q8N5G0 67 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 CLEC2BQ92478 149 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 A0A1W2PPM0 123 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 SEC61GP60059 68 aa5.3□□□□□ -1.56
U2AF1-212ENST00000496462 RBM3P98179 157 aaKnown RBP5.3□□□□□ -1.56
U2AF1-212ENST00000496462 NAA38Q9BRA0 125 aaKnown RBP5.3□□□□□ -1.56
U2AF1-212ENST00000496462 LINC00304Q8N9R0 145 aa5.29□□□□□ -1.56
U2AF1-212ENST00000496462 PKD1P98161 4303 aa5.29□□□□□ -1.56
U2AF1-212ENST00000496462 H3BT86 120 aa5.29□□□□□ -1.56
U2AF1-212ENST00000496462 LST1O00453 97 aa5.29□□□□□ -1.56
U2AF1-212ENST00000496462 NDUFV3P56181 108 aaKnown RBP5.29□□□□□ -1.56
U2AF1-212ENST00000496462 MOBPQ13875 183 aa5.29□□□□□ -1.56
U2AF1-212ENST00000496462 RYR1P21817 5038 aa5.29□□□□□ -1.56
U2AF1-212ENST00000496462 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
U2AF1-212ENST00000496462 C5orf47Q569G3 176 aa5.26□□□□□ -1.57
U2AF1-212ENST00000496462 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
U2AF1-212ENST00000496462 NDUFB1O75438 58 aa5.24□□□□□ -1.57
U2AF1-212ENST00000496462 SPINK1P00995 79 aa5.24□□□□□ -1.57
U2AF1-212ENST00000496462 PRR26Q8N8Z3 221 aa5.24□□□□□ -1.57
U2AF1-212ENST00000496462 K7EP34 96 aa5.24□□□□□ -1.57
U2AF1-212ENST00000496462 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
U2AF1-212ENST00000496462 Q8NDZ9 215 aa5.24□□□□□ -1.57
U2AF1-212ENST00000496462 APOBP04114 4563 aaKnown RBP5.23□□□□□ -1.57
U2AF1-212ENST00000496462 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
U2AF1-212ENST00000496462 F8W1H4 67 aa5.23□□□□□ -1.57
U2AF1-212ENST00000496462 KRTAP7-1Q8IUC3 87 aa5.23□□□□□ -1.57
U2AF1-212ENST00000496462 HRCT1Q6UXD1 115 aa5.22□□□□□ -1.57
U2AF1-212ENST00000496462 HSPG2P98160 4391 aa5.22□□□□□ -1.57
U2AF1-212ENST00000496462 SPRR1BP22528 89 aa5.22□□□□□ -1.57
U2AF1-212ENST00000496462 FAT1Q14517 4588 aa5.22□□□□□ -1.57
U2AF1-212ENST00000496462 CD164Q04900 197 aa5.21□□□□□ -1.58
U2AF1-212ENST00000496462 TEN1Q86WV5 123 aa5.21□□□□□ -1.58
U2AF1-212ENST00000496462 CCKP06307 115 aa5.21□□□□□ -1.58
U2AF1-212ENST00000496462 LINC01600Q96MT4 127 aa5.21□□□□□ -1.58
U2AF1-212ENST00000496462 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
U2AF1-212ENST00000496462 PRR4Q16378 134 aa5.2□□□□□ -1.58
U2AF1-212ENST00000496462 UBL5Q9BZL1 73 aa5.2□□□□□ -1.58
U2AF1-212ENST00000496462 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
U2AF1-212ENST00000496462 A0A1B0GW54 56 aa5.2□□□□□ -1.58
U2AF1-212ENST00000496462 KRTAP4-16G5E9R7 235 aaPredicted RBP5.2□□□□□ -1.58
U2AF1-212ENST00000496462 K7ERU9 68 aa5.2□□□□□ -1.58
U2AF1-212ENST00000496462 NREPQ16612 68 aa5.2□□□□□ -1.58
U2AF1-212ENST00000496462 LINC00483Q53H64 154 aa5.19□□□□□ -1.58
U2AF1-212ENST00000496462 SIGMAR1Q99720 223 aa5.19□□□□□ -1.58
U2AF1-212ENST00000496462 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
U2AF1-212ENST00000496462 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
U2AF1-212ENST00000496462 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
U2AF1-212ENST00000496462 Q8N377 158 aa5.18□□□□□ -1.58
U2AF1-212ENST00000496462 KRTAP11-1Q8IUC1 163 aa5.17□□□□□ -1.58
U2AF1-212ENST00000496462 J3KT08 172 aa5.16□□□□□ -1.58
U2AF1-212ENST00000496462 FAM218AQ96MZ4 157 aa5.16□□□□□ -1.58
U2AF1-212ENST00000496462 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
U2AF1-212ENST00000496462 ACYP1P07311 99 aa5.14□□□□□ -1.59
U2AF1-212ENST00000496462 C14orf132Q9NPU4 83 aa5.14□□□□□ -1.59
U2AF1-212ENST00000496462 A0A087WSZ3 146 aa5.14□□□□□ -1.59
U2AF1-212ENST00000496462 TRBV7-4A0A0J9YYF1 115 aa5.13□□□□□ -1.59
U2AF1-212ENST00000496462 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
U2AF1-212ENST00000496462 MTURNQ8N3F0 131 aa5.13□□□□□ -1.59
U2AF1-212ENST00000496462 TRBV7-7A0A0K0K1E9 115 aa5.12□□□□□ -1.59
U2AF1-212ENST00000496462 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
U2AF1-212ENST00000496462 IGFL1Q6UW32 110 aa5.12□□□□□ -1.59
U2AF1-212ENST00000496462 CDIP1Q9H305 208 aa5.12□□□□□ -1.59
U2AF1-212ENST00000496462 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
U2AF1-212ENST00000496462 MYCBP2O75592 4640 aa5.11□□□□□ -1.59
U2AF1-212ENST00000496462 IGLV8-61A0A075B6I0 122 aa5.1□□□□□ -1.59
U2AF1-212ENST00000496462 IGLV7-46A0A075B6I9 117 aa5.1□□□□□ -1.59
U2AF1-212ENST00000496462 SCGB1A1P11684 91 aa5.1□□□□□ -1.59
U2AF1-212ENST00000496462 BPY2O14599 106 aa5.1□□□□□ -1.59
U2AF1-212ENST00000496462 V9GYY9 64 aa5.1□□□□□ -1.59
U2AF1-212ENST00000496462 LOC110117498A0A087WWA1 95 aa5.09□□□□□ -1.59
U2AF1-212ENST00000496462 A0A087X002 238 aa5.09□□□□□ -1.59
U2AF1-212ENST00000496462 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
U2AF1-212ENST00000496462 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
U2AF1-212ENST00000496462 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
U2AF1-212ENST00000496462 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
U2AF1-212ENST00000496462 Q6Q795 121 aa5.07□□□□□ -1.6
U2AF1-212ENST00000496462 SMCPP49901 116 aaPredicted RBP5.06□□□□□ -1.6
U2AF1-212ENST00000496462 SMIM29Q86T20 159 aa5.06□□□□□ -1.6
U2AF1-212ENST00000496462 HERC1Q15751 4861 aa5.05□□□□□ -1.6
U2AF1-212ENST00000496462 KRTAP10-8P60410 259 aa5.05□□□□□ -1.6
U2AF1-212ENST00000496462 KRTAP13-2Q52LG2 175 aa5.05□□□□□ -1.6
U2AF1-212ENST00000496462 C8orf87E5RJ46 101 aa5.05□□□□□ -1.6
U2AF1-212ENST00000496462 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
U2AF1-212ENST00000496462 NDUFS5O43920 106 aa5.04□□□□□ -1.6
U2AF1-212ENST00000496462 Q6ZQT0 140 aa5.04□□□□□ -1.6
U2AF1-212ENST00000496462 VPS13BQ7Z7G8 4022 aa5.04□□□□□ -1.6
U2AF1-212ENST00000496462 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
U2AF1-212ENST00000496462 ATP5EP2Q5VTU8 51 aa5.03□□□□□ -1.6
U2AF1-212ENST00000496462 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
U2AF1-212ENST00000496462 Q5XG85 94 aa5.01□□□□□ -1.61
U2AF1-212ENST00000496462 LINC00313P59037 77 aa5.01□□□□□ -1.61
U2AF1-212ENST00000496462 HIST1H4AP62805 103 aaKnown RBP5.01□□□□□ -1.61
U2AF1-212ENST00000496462 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
U2AF1-212ENST00000496462 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
U2AF1-212ENST00000496462 LRP1Q07954 4544 aaKnown RBP5□□□□□ -1.61
U2AF1-212ENST00000496462 CCDC179H3BU77 68 aa5□□□□□ -1.61
U2AF1-212ENST00000496462 A0A1W2PNM2 257 aa5□□□□□ -1.61
U2AF1-212ENST00000496462 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
U2AF1-212ENST00000496462 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
U2AF1-212ENST00000496462 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms