RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
CXCL12-208ENST00000496375 LINC00304Q8N9R0 145 aa8.36□□□□□ -1.07
CXCL12-208ENST00000496375 VPS25Q9BRG1 176 aa8.36□□□□□ -1.07
CXCL12-208ENST00000496375 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
CXCL12-208ENST00000496375 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
CXCL12-208ENST00000496375 RETNLBQ9BQ08 111 aa8.35□□□□□ -1.07
CXCL12-208ENST00000496375 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
CXCL12-208ENST00000496375 ELOF1P60002 83 aaKnown RBP8.34□□□□□ -1.07
CXCL12-208ENST00000496375 LINC00483Q53H64 154 aa8.34□□□□□ -1.07
CXCL12-208ENST00000496375 C9JAW5 83 aa8.33□□□□□ -1.08
CXCL12-208ENST00000496375 SLC25A20O43772 301 aa8.33□□□□□ -1.08
CXCL12-208ENST00000496375 ERC2-IT1O76042 136 aa8.33□□□□□ -1.08
CXCL12-208ENST00000496375 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
CXCL12-208ENST00000496375 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
CXCL12-208ENST00000496375 PPDPFLQ8WWR9 84 aa8.32□□□□□ -1.08
CXCL12-208ENST00000496375 LST1O00453 97 aa8.31□□□□□ -1.08
CXCL12-208ENST00000496375 MTURNQ8N3F0 131 aa8.31□□□□□ -1.08
CXCL12-208ENST00000496375 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
CXCL12-208ENST00000496375 DHRS4-AS1Q9P1J3 65 aa8.31□□□□□ -1.08
CXCL12-208ENST00000496375 H3BT86 120 aa8.3□□□□□ -1.08
CXCL12-208ENST00000496375 COX7BP24311 80 aa8.3□□□□□ -1.08
CXCL12-208ENST00000496375 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
CXCL12-208ENST00000496375 SMIM11BQ8TCY0 68 aa8.29□□□□□ -1.08
CXCL12-208ENST00000496375 H0YGX0 51 aa8.27□□□□□ -1.09
CXCL12-208ENST00000496375 TRACP01848 142 aa8.27□□□□□ -1.09
CXCL12-208ENST00000496375 SPRR1BP22528 89 aa8.27□□□□□ -1.09
CXCL12-208ENST00000496375 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
CXCL12-208ENST00000496375 CDIP1Q9H305 208 aa8.27□□□□□ -1.09
CXCL12-208ENST00000496375 IGLV7-46A0A075B6I9 117 aa8.26□□□□□ -1.09
CXCL12-208ENST00000496375 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
CXCL12-208ENST00000496375 GAGE2AQ6NT46 116 aa8.24□□□□□ -1.09
CXCL12-208ENST00000496375 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
CXCL12-208ENST00000496375 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
CXCL12-208ENST00000496375 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
CXCL12-208ENST00000496375 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.1
CXCL12-208ENST00000496375 SIGMAR1Q99720 223 aa8.21□□□□□ -1.1
CXCL12-208ENST00000496375 A0A1B0GX51 115 aa8.19□□□□□ -1.1
CXCL12-208ENST00000496375 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
CXCL12-208ENST00000496375 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
CXCL12-208ENST00000496375 LINC00575Q6W349 94 aa8.19□□□□□ -1.1
CXCL12-208ENST00000496375 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
CXCL12-208ENST00000496375 BAALC-AS2P0C853 105 aa8.18□□□□□ -1.1
CXCL12-208ENST00000496375 SSBP3-AS1Q7Z2R9 100 aa8.18□□□□□ -1.1
CXCL12-208ENST00000496375 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
CXCL12-208ENST00000496375 SNCGO76070 127 aa8.17□□□□□ -1.1
CXCL12-208ENST00000496375 DNAL4O96015 105 aa8.17□□□□□ -1.1
CXCL12-208ENST00000496375 Q8NBF4 154 aa8.17□□□□□ -1.1
CXCL12-208ENST00000496375 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
CXCL12-208ENST00000496375 SCGB1A1P11684 91 aa8.15□□□□□ -1.1
CXCL12-208ENST00000496375 PCP4P48539 62 aa8.15□□□□□ -1.1
CXCL12-208ENST00000496375 MOBPQ13875 183 aa8.15□□□□□ -1.1
CXCL12-208ENST00000496375 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.1
CXCL12-208ENST00000496375 IGLV9-49A0A0B4J1Y8 123 aa8.14□□□□□ -1.11
CXCL12-208ENST00000496375 hADV29S1A0JD25 119 aa8.14□□□□□ -1.11
CXCL12-208ENST00000496375 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
CXCL12-208ENST00000496375 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
CXCL12-208ENST00000496375 Q8N377 158 aa8.13□□□□□ -1.11
CXCL12-208ENST00000496375 LAMTOR3Q9UHA4 124 aa8.13□□□□□ -1.11
CXCL12-208ENST00000496375 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
CXCL12-208ENST00000496375 SPINK1P00995 79 aa8.12□□□□□ -1.11
CXCL12-208ENST00000496375 ACYP1P07311 99 aa8.12□□□□□ -1.11
CXCL12-208ENST00000496375 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.12□□□□□ -1.11
CXCL12-208ENST00000496375 KRTAP13-3Q3SY46 172 aa8.11□□□□□ -1.11
CXCL12-208ENST00000496375 Q6ZQY7 126 aa8.11□□□□□ -1.11
CXCL12-208ENST00000496375 DEFB105AQ8NG35 78 aa8.1□□□□□ -1.11
CXCL12-208ENST00000496375 H3BQ85 93 aa8.09□□□□□ -1.11
CXCL12-208ENST00000496375 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
CXCL12-208ENST00000496375 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.11
CXCL12-208ENST00000496375 TMEM256-PLSCR3K7ERE1 68 aa8.06□□□□□ -1.12
CXCL12-208ENST00000496375 CD164Q04900 197 aa8.06□□□□□ -1.12
CXCL12-208ENST00000496375 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
CXCL12-208ENST00000496375 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
CXCL12-208ENST00000496375 GHRHP01286 108 aa8.05□□□□□ -1.12
CXCL12-208ENST00000496375 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
CXCL12-208ENST00000496375 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
CXCL12-208ENST00000496375 MT-ATP8P03928 68 aa8.02□□□□□ -1.13
CXCL12-208ENST00000496375 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
CXCL12-208ENST00000496375 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
CXCL12-208ENST00000496375 F8WEM9 126 aa8□□□□□ -1.13
CXCL12-208ENST00000496375 Q5XG85 94 aa8□□□□□ -1.13
CXCL12-208ENST00000496375 Q6JHZ5 121 aa7.99□□□□□ -1.13
CXCL12-208ENST00000496375 Q6Q795 121 aa7.99□□□□□ -1.13
CXCL12-208ENST00000496375 LIMD2Q9BT23 127 aa7.98□□□□□ -1.13
CXCL12-208ENST00000496375 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
CXCL12-208ENST00000496375 LINC00643Q86TS7 51 aa7.97□□□□□ -1.13
CXCL12-208ENST00000496375 C21orf62-AS1Q17RA5 79 aa7.95□□□□□ -1.14
CXCL12-208ENST00000496375 XP32Q5T750 250 aa7.95□□□□□ -1.14
CXCL12-208ENST00000496375 IGFL1Q6UW32 110 aa7.95□□□□□ -1.14
CXCL12-208ENST00000496375 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
CXCL12-208ENST00000496375 C14orf132Q9NPU4 83 aa7.95□□□□□ -1.14
CXCL12-208ENST00000496375 CCKP06307 115 aa7.94□□□□□ -1.14
CXCL12-208ENST00000496375 PDE6GP18545 87 aa7.94□□□□□ -1.14
CXCL12-208ENST00000496375 NDUFV3P56181 108 aaKnown RBP7.94□□□□□ -1.14
CXCL12-208ENST00000496375 A0A0G2JQZ4 141 aa7.93□□□□□ -1.14
CXCL12-208ENST00000496375 TRBV7-7A0A0K0K1E9 115 aa7.92□□□□□ -1.14
CXCL12-208ENST00000496375 RBM3P98179 157 aaKnown RBP7.92□□□□□ -1.14
CXCL12-208ENST00000496375 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
CXCL12-208ENST00000496375 LOC110117498A0A087WWA1 95 aa7.9□□□□□ -1.14
CXCL12-208ENST00000496375 FSIP2Q5CZC0 6907 aa7.9□□□□□ -1.15
CXCL12-208ENST00000496375 A0A1B0GV72 72 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms