RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 TNXBP22105 4242 aa5.69□□□□□ -1.5
PRPF3-207ENST00000496202 TEX49A0A1B0GTD5 131 aa5.69□□□□□ -1.5
PRPF3-207ENST00000496202 TSPAN13O95857 204 aa5.69□□□□□ -1.5
PRPF3-207ENST00000496202 COX6CP09669 75 aa5.69□□□□□ -1.5
PRPF3-207ENST00000496202 MOBPQ13875 183 aa5.69□□□□□ -1.5
PRPF3-207ENST00000496202 LAMTOR3Q9UHA4 124 aa5.69□□□□□ -1.5
PRPF3-207ENST00000496202 SPRR1BP22528 89 aa5.68□□□□□ -1.5
PRPF3-207ENST00000496202 BATFQ16520 125 aa5.68□□□□□ -1.5
PRPF3-207ENST00000496202 Q6ZQY7 126 aa5.68□□□□□ -1.5
PRPF3-207ENST00000496202 LINC00304Q8N9R0 145 aa5.68□□□□□ -1.5
PRPF3-207ENST00000496202 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
PRPF3-207ENST00000496202 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.67□□□□□ -1.5
PRPF3-207ENST00000496202 Q8NBF4 154 aa5.67□□□□□ -1.5
PRPF3-207ENST00000496202 F8WEM9 126 aa5.66□□□□□ -1.5
PRPF3-207ENST00000496202 A0A1B0GX51 115 aa5.65□□□□□ -1.5
PRPF3-207ENST00000496202 DNAL4O96015 105 aa5.65□□□□□ -1.5
PRPF3-207ENST00000496202 SCGB1C2P0DMR2 95 aa5.65□□□□□ -1.5
PRPF3-207ENST00000496202 UBE2V1Q13404 147 aa5.65□□□□□ -1.5
PRPF3-207ENST00000496202 SSBP3-AS1Q7Z2R9 100 aa5.65□□□□□ -1.5
PRPF3-207ENST00000496202 CLEC2BQ92478 149 aa5.65□□□□□ -1.5
PRPF3-207ENST00000496202 LINC01547P58512 204 aaPredicted RBP5.64□□□□□ -1.51
PRPF3-207ENST00000496202 OCIAD2Q56VL3 154 aa5.64□□□□□ -1.51
PRPF3-207ENST00000496202 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
PRPF3-207ENST00000496202 Q8N377 158 aa5.64□□□□□ -1.51
PRPF3-207ENST00000496202 PPDPFLQ8WWR9 84 aa5.64□□□□□ -1.51
PRPF3-207ENST00000496202 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
PRPF3-207ENST00000496202 SNHG12Q9BXW3 62 aa5.63□□□□□ -1.51
PRPF3-207ENST00000496202 LYRM7Q5U5X0 104 aa5.62□□□□□ -1.51
PRPF3-207ENST00000496202 HERC1Q15751 4861 aa5.62□□□□□ -1.51
PRPF3-207ENST00000496202 SMIM29Q86T20 159 aa5.61□□□□□ -1.51
PRPF3-207ENST00000496202 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
PRPF3-207ENST00000496202 SPINK1P00995 79 aa5.6□□□□□ -1.51
PRPF3-207ENST00000496202 FABP2P12104 132 aa5.6□□□□□ -1.51
PRPF3-207ENST00000496202 ORMDL1Q9P0S3 153 aa5.6□□□□□ -1.51
PRPF3-207ENST00000496202 PCP4L1A6NKN8 68 aa5.59□□□□□ -1.51
PRPF3-207ENST00000496202 H3BQ85 93 aa5.59□□□□□ -1.51
PRPF3-207ENST00000496202 LST1O00453 97 aa5.58□□□□□ -1.52
PRPF3-207ENST00000496202 TRACP01848 142 aa5.58□□□□□ -1.52
PRPF3-207ENST00000496202 Q6JHZ5 121 aa5.58□□□□□ -1.52
PRPF3-207ENST00000496202 H3BUT2 72 aa5.57□□□□□ -1.52
PRPF3-207ENST00000496202 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
PRPF3-207ENST00000496202 ATXN8Q156A1 80 aa5.57□□□□□ -1.52
PRPF3-207ENST00000496202 PRR4Q16378 134 aa5.57□□□□□ -1.52
PRPF3-207ENST00000496202 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
PRPF3-207ENST00000496202 TMEM256-PLSCR3K7ERE1 68 aa5.56□□□□□ -1.52
PRPF3-207ENST00000496202 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
PRPF3-207ENST00000496202 COL5A1-AS1Q5SY13 56 aa5.56□□□□□ -1.52
PRPF3-207ENST00000496202 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
PRPF3-207ENST00000496202 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
PRPF3-207ENST00000496202 TAX1BP3O14907 124 aa5.55□□□□□ -1.52
PRPF3-207ENST00000496202 TCL1BO95988 128 aa5.55□□□□□ -1.52
PRPF3-207ENST00000496202 CD164Q04900 197 aa5.55□□□□□ -1.52
PRPF3-207ENST00000496202 RETNLBQ9BQ08 111 aa5.55□□□□□ -1.52
PRPF3-207ENST00000496202 TRBV20-1A0A075B6N2 111 aa5.54□□□□□ -1.52
PRPF3-207ENST00000496202 A0A0G2JQZ4 141 aa5.54□□□□□ -1.52
PRPF3-207ENST00000496202 H3BMG7 143 aa5.54□□□□□ -1.52
PRPF3-207ENST00000496202 A0A1W2PPM0 123 aa5.53□□□□□ -1.52
PRPF3-207ENST00000496202 IGFL1Q6UW32 110 aa5.53□□□□□ -1.52
PRPF3-207ENST00000496202 Q75L30 129 aa5.53□□□□□ -1.52
PRPF3-207ENST00000496202 A0A1B0GV72 72 aa5.52□□□□□ -1.53
PRPF3-207ENST00000496202 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
PRPF3-207ENST00000496202 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
PRPF3-207ENST00000496202 C9JAW5 83 aa5.5□□□□□ -1.53
PRPF3-207ENST00000496202 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
PRPF3-207ENST00000496202 ANKRD29Q8N6D5 301 aa5.5□□□□□ -1.53
PRPF3-207ENST00000496202 TRBV7-7A0A0K0K1E9 115 aa5.48□□□□□ -1.53
PRPF3-207ENST00000496202 SPCS1Q9Y6A9 102 aa5.48□□□□□ -1.53
PRPF3-207ENST00000496202 RBM3P98179 157 aaKnown RBP5.47□□□□□ -1.53
PRPF3-207ENST00000496202 Q5XG85 94 aa5.47□□□□□ -1.53
PRPF3-207ENST00000496202 TEN1Q86WV5 123 aa5.47□□□□□ -1.53
PRPF3-207ENST00000496202 DSCR8Q96T75 97 aa5.47□□□□□ -1.53
PRPF3-207ENST00000496202 SEC61BP60468 96 aaKnown RBP5.46□□□□□ -1.54
PRPF3-207ENST00000496202 Q6Q795 121 aa5.46□□□□□ -1.54
PRPF3-207ENST00000496202 SS18L2Q9UHA2 77 aa5.46□□□□□ -1.54
PRPF3-207ENST00000496202 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
PRPF3-207ENST00000496202 VPS25Q9BRG1 176 aa5.45□□□□□ -1.54
PRPF3-207ENST00000496202 JMJD7-PLA2G4BH0Y9G9 81 aa5.44□□□□□ -1.54
PRPF3-207ENST00000496202 H3BT86 120 aa5.44□□□□□ -1.54
PRPF3-207ENST00000496202 CCKP06307 115 aa5.44□□□□□ -1.54
PRPF3-207ENST00000496202 MTURNQ8N3F0 131 aa5.44□□□□□ -1.54
PRPF3-207ENST00000496202 A0A087WSZ3 146 aa5.43□□□□□ -1.54
PRPF3-207ENST00000496202 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
PRPF3-207ENST00000496202 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
PRPF3-207ENST00000496202 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
PRPF3-207ENST00000496202 C1orf195Q5TG92 126 aa5.43□□□□□ -1.54
PRPF3-207ENST00000496202 K7EP34 96 aa5.42□□□□□ -1.54
PRPF3-207ENST00000496202 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
PRPF3-207ENST00000496202 GTF2H5Q6ZYL4 71 aa5.42□□□□□ -1.54
PRPF3-207ENST00000496202 PDE6GP18545 87 aa5.41□□□□□ -1.54
PRPF3-207ENST00000496202 C14orf132Q9NPU4 83 aa5.4□□□□□ -1.54
PRPF3-207ENST00000496202 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
PRPF3-207ENST00000496202 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
PRPF3-207ENST00000496202 Q6ZQT0 140 aa5.38□□□□□ -1.55
PRPF3-207ENST00000496202 LRP2P98164 4655 aa5.38□□□□□ -1.55
PRPF3-207ENST00000496202 OBSCN-AS1Q96MR7 158 aa5.37□□□□□ -1.55
PRPF3-207ENST00000496202 SIGMAR1Q99720 223 aa5.37□□□□□ -1.55
PRPF3-207ENST00000496202 C9orf92A6NGG3 77 aa5.36□□□□□ -1.55
PRPF3-207ENST00000496202 A0A1B0GW54 56 aa5.34□□□□□ -1.55
PRPF3-207ENST00000496202 PRO0461Q9UI25 63 aa5.34□□□□□ -1.55
PRPF3-207ENST00000496202 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms