RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 SRRM2Q9UQ35 2752 aaKnown RBP-0.21□□□□□ -2.44
COPS3-211ENST00000495640 DDX60LQ5H9U9 1706 aaKnown RBP-0.21□□□□□ -2.44
COPS3-211ENST00000495640 CUBNO60494 3623 aa-0.21□□□□□ -2.44
COPS3-211ENST00000495640 PLXNC1O60486 1568 aa-0.21□□□□□ -2.44
COPS3-211ENST00000495640 NDUFA4O00483 81 aa-0.22□□□□□ -2.44
COPS3-211ENST00000495640 PDZD2O15018 2839 aa-0.22□□□□□ -2.44
COPS3-211ENST00000495640 LRRIQ1Q96JM4 1722 aa-0.22□□□□□ -2.44
COPS3-211ENST00000495640 CREBBPQ92793 2442 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 SETD2Q9BYW2 2564 aaPredicted RBP-0.23□□□□□ -2.45
COPS3-211ENST00000495640 TJP1Q07157 1748 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 A0A087WXM4 84 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 H0YAA0 97 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 C3orf79P0CE67 100 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 PRO3102Q9H379 93 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 ANKARQ7Z5J8 1434 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 AKAP9Q99996 3911 aa-0.23□□□□□ -2.45
COPS3-211ENST00000495640 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
COPS3-211ENST00000495640 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.24□□□□□ -2.45
COPS3-211ENST00000495640 HTTP42858 3142 aa-0.25□□□□□ -2.45
COPS3-211ENST00000495640 LINC00158P58513 81 aa-0.25□□□□□ -2.45
COPS3-211ENST00000495640 KRTAP6-2Q3LI66 62 aa-0.25□□□□□ -2.45
COPS3-211ENST00000495640 VPS13BQ7Z7G8 4022 aa-0.25□□□□□ -2.45
COPS3-211ENST00000495640 PARP4Q9UKK3 1724 aaKnown RBP-0.25□□□□□ -2.45
COPS3-211ENST00000495640 DEPDC5O75140 1603 aa-0.26□□□□□ -2.45
COPS3-211ENST00000495640 ANKRD50Q9ULJ7 1429 aa-0.26□□□□□ -2.45
COPS3-211ENST00000495640 SPTBN4Q9H254 2564 aa-0.26□□□□□ -2.45
COPS3-211ENST00000495640 MYO5CQ9NQX4 1742 aa-0.27□□□□□ -2.45
COPS3-211ENST00000495640 ITSN1Q15811 1721 aa-0.27□□□□□ -2.45
COPS3-211ENST00000495640 RNF17Q9BXT8 1623 aaKnown RBP-0.27□□□□□ -2.45
COPS3-211ENST00000495640 MACF1Q9UPN3 7388 aaKnown RBP-0.28□□□□□ -2.45
COPS3-211ENST00000495640 SONP18583 2426 aaKnown RBP-0.28□□□□□ -2.45
COPS3-211ENST00000495640 SPRR2AP35326 72 aa-0.28□□□□□ -2.45
COPS3-211ENST00000495640 KRTAP6-1Q3LI64 71 aa-0.28□□□□□ -2.45
COPS3-211ENST00000495640 DMXL1Q9Y485 3027 aa-0.28□□□□□ -2.45
COPS3-211ENST00000495640 IQGAP3Q86VI3 1631 aa-0.28□□□□□ -2.45
COPS3-211ENST00000495640 SPG11Q96JI7 2443 aa-0.28□□□□□ -2.45
COPS3-211ENST00000495640 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
COPS3-211ENST00000495640 DNAH9Q9NYC9 4486 aa-0.29□□□□□ -2.46
COPS3-211ENST00000495640 LYNX1G3V0Z9 82 aa-0.29□□□□□ -2.46
COPS3-211ENST00000495640 FAT3Q8TDW7 4589 aa-0.3□□□□□ -2.46
COPS3-211ENST00000495640 LMTK2Q8IWU2 1503 aa-0.31□□□□□ -2.46
COPS3-211ENST00000495640 DEFA5Q01523 94 aa-0.31□□□□□ -2.46
COPS3-211ENST00000495640 ZC3H13Q5T200 1668 aaKnown RBP-0.31□□□□□ -2.46
COPS3-211ENST00000495640 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
COPS3-211ENST00000495640 NRAPQ86VF7 1730 aa-0.32□□□□□ -2.46
COPS3-211ENST00000495640 DEFB131BA0A096LNP1 70 aa-0.32□□□□□ -2.46
COPS3-211ENST00000495640 KCNQ1DNQ9H478 68 aa-0.32□□□□□ -2.46
COPS3-211ENST00000495640 EPG5Q9HCE0 2579 aa-0.33□□□□□ -2.46
COPS3-211ENST00000495640 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
COPS3-211ENST00000495640 H0YGG7 62 aa-0.33□□□□□ -2.46
COPS3-211ENST00000495640 DIP2AQ14689 1571 aa-0.33□□□□□ -2.46
COPS3-211ENST00000495640 MXRA5Q9NR99 2828 aa-0.33□□□□□ -2.46
COPS3-211ENST00000495640 KALRNO60229 2985 aa-0.33□□□□□ -2.46
COPS3-211ENST00000495640 CEP290O15078 2479 aa-0.34□□□□□ -2.46
COPS3-211ENST00000495640 CDC42BPGQ6DT37 1551 aa-0.34□□□□□ -2.46
COPS3-211ENST00000495640 VPS13DQ5THJ4 4388 aa-0.34□□□□□ -2.46
COPS3-211ENST00000495640 UGGT2Q9NYU1 1516 aa-0.34□□□□□ -2.46
COPS3-211ENST00000495640 TACC2O95359 2948 aa-0.35□□□□□ -2.47
COPS3-211ENST00000495640 DEFB130BP0DP73 79 aa-0.35□□□□□ -2.47
COPS3-211ENST00000495640 DEFB130AP0DP74 79 aa-0.35□□□□□ -2.47
COPS3-211ENST00000495640 SPRR2EP22531 72 aa-0.35□□□□□ -2.47
COPS3-211ENST00000495640 NHSQ6T4R5 1651 aa-0.35□□□□□ -2.47
COPS3-211ENST00000495640 RALGAPBQ86X10 1494 aa-0.35□□□□□ -2.47
COPS3-211ENST00000495640 THOC2Q8NI27 1593 aaKnown RBP-0.36□□□□□ -2.47
COPS3-211ENST00000495640 KRTAP19-7Q3SYF9 63 aa-0.36□□□□□ -2.47
COPS3-211ENST00000495640 ENHOQ6UWT2 76 aa-0.36□□□□□ -2.47
COPS3-211ENST00000495640 HIVEP1P15822 2718 aa-0.36□□□□□ -2.47
COPS3-211ENST00000495640 GCN1Q92616 2671 aaKnown RBP-0.36□□□□□ -2.47
COPS3-211ENST00000495640 HFM1A2PYH4 1435 aa-0.37□□□□□ -2.47
COPS3-211ENST00000495640 PKHD1L1Q86WI1 4243 aa-0.37□□□□□ -2.47
COPS3-211ENST00000495640 H3BVH4 76 aa-0.37□□□□□ -2.47
COPS3-211ENST00000495640 IAPPP10997 89 aa-0.37□□□□□ -2.47
COPS3-211ENST00000495640 CRIP1P50238 77 aa-0.37□□□□□ -2.47
COPS3-211ENST00000495640 PKD1L2Q7Z442 2459 aa-0.37□□□□□ -2.47
COPS3-211ENST00000495640 FASNP49327 2511 aaKnown RBP-0.37□□□□□ -2.47
COPS3-211ENST00000495640 ANK3Q12955 4377 aaKnown RBP-0.38□□□□□ -2.47
COPS3-211ENST00000495640 UBL5Q9BZL1 73 aa-0.38□□□□□ -2.47
COPS3-211ENST00000495640 ANKRD11Q6UB99 2663 aaPredicted RBP-0.38□□□□□ -2.47
COPS3-211ENST00000495640 ABCA9Q8IUA7 1624 aa-0.38□□□□□ -2.47
COPS3-211ENST00000495640 APOBP04114 4563 aaKnown RBP-0.38□□□□□ -2.47
COPS3-211ENST00000495640 INO80Q9ULG1 1556 aaPredicted RBP-0.39□□□□□ -2.47
COPS3-211ENST00000495640 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
COPS3-211ENST00000495640 SMCO4Q9NRQ5 59 aa-0.39□□□□□ -2.47
COPS3-211ENST00000495640 SPENQ96T58 3664 aaKnown RBP-0.4□□□□□ -2.47
COPS3-211ENST00000495640 KMT2CQ8NEZ4 4911 aaKnown RBP-0.4□□□□□ -2.47
COPS3-211ENST00000495640 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
COPS3-211ENST00000495640 MRPL33O75394 65 aaKnown RBP-0.4□□□□□ -2.47
COPS3-211ENST00000495640 LRRK2Q5S007 2527 aa-0.41□□□□□ -2.47
COPS3-211ENST00000495640 ASXL1Q8IXJ9 1541 aa-0.41□□□□□ -2.48
COPS3-211ENST00000495640 DUOX2Q9NRD8 1548 aa-0.41□□□□□ -2.48
COPS3-211ENST00000495640 PRLHP81277 87 aa-0.41□□□□□ -2.48
COPS3-211ENST00000495640 HILPDAQ9Y5L2 63 aa-0.41□□□□□ -2.48
COPS3-211ENST00000495640 ITSN2Q9NZM3 1697 aa-0.42□□□□□ -2.48
COPS3-211ENST00000495640 NBEAQ8NFP9 2946 aa-0.42□□□□□ -2.48
COPS3-211ENST00000495640 MTORP42345 2549 aa-0.42□□□□□ -2.48
COPS3-211ENST00000495640 DSTQ03001 7570 aaKnown RBP-0.42□□□□□ -2.48
COPS3-211ENST00000495640 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.42□□□□□ -2.48
COPS3-211ENST00000495640 SACSQ9NZJ4 4579 aa-0.43□□□□□ -2.48
COPS3-211ENST00000495640 PDCD5O14737 125 aa-0.43□□□□□ -2.48
COPS3-211ENST00000495640 MT1AP04731 61 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms