RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 C14orf144Q96I85 54 aa8.61□□□□□ -1.03
COL4A2-209ENST00000494852 PAM16Q9Y3D7 125 aa8.61□□□□□ -1.03
COL4A2-209ENST00000494852 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
COL4A2-209ENST00000494852 C12orf57Q99622 126 aa8.59□□□□□ -1.03
COL4A2-209ENST00000494852 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
COL4A2-209ENST00000494852 LINC00575Q6W349 94 aa8.58□□□□□ -1.04
COL4A2-209ENST00000494852 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
COL4A2-209ENST00000494852 PRO1933Q9H354 126 aa8.58□□□□□ -1.04
COL4A2-209ENST00000494852 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
COL4A2-209ENST00000494852 M0R2T5 61 aa8.56□□□□□ -1.04
COL4A2-209ENST00000494852 CD164Q04900 197 aa8.56□□□□□ -1.04
COL4A2-209ENST00000494852 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
COL4A2-209ENST00000494852 hADV29S1A0JD25 119 aa8.55□□□□□ -1.04
COL4A2-209ENST00000494852 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
COL4A2-209ENST00000494852 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
COL4A2-209ENST00000494852 FLGP20930 4061 aaPredicted RBP8.53□□□□□ -1.04
COL4A2-209ENST00000494852 CFC1P0CG37 223 aa8.53□□□□□ -1.04
COL4A2-209ENST00000494852 BVES-AS1Q5T3Y7 98 aa8.53□□□□□ -1.04
COL4A2-209ENST00000494852 H7C2G1 150 aa8.52□□□□□ -1.05
COL4A2-209ENST00000494852 Q6ZQY7 126 aa8.52□□□□□ -1.05
COL4A2-209ENST00000494852 A0A0B4J2C4 111 aa8.5□□□□□ -1.05
COL4A2-209ENST00000494852 A0A0G2JQZ4 141 aa8.5□□□□□ -1.05
COL4A2-209ENST00000494852 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
COL4A2-209ENST00000494852 KRTAP9-7A8MTY7 169 aa8.49□□□□□ -1.05
COL4A2-209ENST00000494852 PYY3Q5JQD4 70 aa8.49□□□□□ -1.05
COL4A2-209ENST00000494852 Q5XG85 94 aa8.49□□□□□ -1.05
COL4A2-209ENST00000494852 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
COL4A2-209ENST00000494852 CEND1Q8N111 149 aa8.48□□□□□ -1.05
COL4A2-209ENST00000494852 F8WEM9 126 aa8.47□□□□□ -1.05
COL4A2-209ENST00000494852 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
COL4A2-209ENST00000494852 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.06
COL4A2-209ENST00000494852 PPDPFLQ8WWR9 84 aa8.45□□□□□ -1.06
COL4A2-209ENST00000494852 TMA7Q9Y2S6 64 aaKnown RBP8.45□□□□□ -1.06
COL4A2-209ENST00000494852 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
COL4A2-209ENST00000494852 A6NJY4 79 aa8.44□□□□□ -1.06
COL4A2-209ENST00000494852 H0YGX0 51 aa8.44□□□□□ -1.06
COL4A2-209ENST00000494852 FXYD2P54710 66 aa8.43□□□□□ -1.06
COL4A2-209ENST00000494852 OCIAD2Q56VL3 154 aa8.43□□□□□ -1.06
COL4A2-209ENST00000494852 Q6JHZ5 121 aa8.43□□□□□ -1.06
COL4A2-209ENST00000494852 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
COL4A2-209ENST00000494852 RPL37P61927 97 aaKnown RBP8.42□□□□□ -1.06
COL4A2-209ENST00000494852 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
COL4A2-209ENST00000494852 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
COL4A2-209ENST00000494852 FAM218AQ96MZ4 157 aa8.41□□□□□ -1.06
COL4A2-209ENST00000494852 SNCGO76070 127 aa8.4□□□□□ -1.06
COL4A2-209ENST00000494852 CLEC2BQ92478 149 aa8.4□□□□□ -1.06
COL4A2-209ENST00000494852 SNHG12Q9BXW3 62 aa8.4□□□□□ -1.06
COL4A2-209ENST00000494852 TCL1BO95988 128 aa8.39□□□□□ -1.07
COL4A2-209ENST00000494852 HSD52Q0P140 79 aa8.39□□□□□ -1.07
COL4A2-209ENST00000494852 TRBV7-7A0A0K0K1E9 115 aa8.37□□□□□ -1.07
COL4A2-209ENST00000494852 A0A1B0GX51 115 aa8.36□□□□□ -1.07
COL4A2-209ENST00000494852 H3BUT2 72 aa8.35□□□□□ -1.07
COL4A2-209ENST00000494852 TRIAP1O43715 76 aa8.35□□□□□ -1.07
COL4A2-209ENST00000494852 UQCR10Q9UDW1 63 aa8.35□□□□□ -1.07
COL4A2-209ENST00000494852 SSPOA2VEC9 5147 aa8.35□□□□□ -1.07
COL4A2-209ENST00000494852 NDUFV3P56181 108 aaKnown RBP8.33□□□□□ -1.08
COL4A2-209ENST00000494852 USH2AO75445 5202 aa8.33□□□□□ -1.08
COL4A2-209ENST00000494852 K7ERJ3 54 aa8.32□□□□□ -1.08
COL4A2-209ENST00000494852 GHRHP01286 108 aa8.32□□□□□ -1.08
COL4A2-209ENST00000494852 PSMB2P49721 201 aa8.29□□□□□ -1.08
COL4A2-209ENST00000494852 Q6Q795 121 aa8.29□□□□□ -1.08
COL4A2-209ENST00000494852 FABP2P12104 132 aa8.28□□□□□ -1.08
COL4A2-209ENST00000494852 H3BMG7 143 aa8.27□□□□□ -1.09
COL4A2-209ENST00000494852 COX6CP09669 75 aa8.26□□□□□ -1.09
COL4A2-209ENST00000494852 TEN1Q86WV5 123 aa8.26□□□□□ -1.09
COL4A2-209ENST00000494852 LST1O00453 97 aa8.25□□□□□ -1.09
COL4A2-209ENST00000494852 LCE2BO14633 110 aa8.25□□□□□ -1.09
COL4A2-209ENST00000494852 DNAL4O96015 105 aa8.25□□□□□ -1.09
COL4A2-209ENST00000494852 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
COL4A2-209ENST00000494852 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
COL4A2-209ENST00000494852 SS18L2Q9UHA2 77 aa8.24□□□□□ -1.09
COL4A2-209ENST00000494852 H3BQ85 93 aa8.23□□□□□ -1.09
COL4A2-209ENST00000494852 FCGBPQ9Y6R7 5405 aaPredicted RBP8.2□□□□□ -1.1
COL4A2-209ENST00000494852 A0A087WSZ3 146 aa8.2□□□□□ -1.1
COL4A2-209ENST00000494852 TMEM256-PLSCR3K7ERE1 68 aa8.2□□□□□ -1.1
COL4A2-209ENST00000494852 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
COL4A2-209ENST00000494852 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
COL4A2-209ENST00000494852 TRACP01848 142 aa8.18□□□□□ -1.1
COL4A2-209ENST00000494852 SCGB1C2P0DMR2 95 aa8.17□□□□□ -1.1
COL4A2-209ENST00000494852 Q75L30 129 aa8.17□□□□□ -1.1
COL4A2-209ENST00000494852 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
COL4A2-209ENST00000494852 OBSCN-AS1Q96MR7 158 aa8.17□□□□□ -1.1
COL4A2-209ENST00000494852 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
COL4A2-209ENST00000494852 Q96NJ1 140 aa8.16□□□□□ -1.1
COL4A2-209ENST00000494852 A0A1B0GV72 72 aa8.15□□□□□ -1.1
COL4A2-209ENST00000494852 UBE2V1Q13404 147 aa8.15□□□□□ -1.1
COL4A2-209ENST00000494852 TRBV7-4A0A0J9YYF1 115 aa8.14□□□□□ -1.11
COL4A2-209ENST00000494852 M0R143 59 aa8.13□□□□□ -1.11
COL4A2-209ENST00000494852 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
COL4A2-209ENST00000494852 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
COL4A2-209ENST00000494852 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
COL4A2-209ENST00000494852 CCKP06307 115 aa8.09□□□□□ -1.11
COL4A2-209ENST00000494852 BAALC-AS2P0C853 105 aa8.07□□□□□ -1.12
COL4A2-209ENST00000494852 RBM3P98179 157 aaKnown RBP8.07□□□□□ -1.12
COL4A2-209ENST00000494852 MT2AP02795 61 aa8.06□□□□□ -1.12
COL4A2-209ENST00000494852 C20orf166-AS1Q96NR2 134 aa8.06□□□□□ -1.12
COL4A2-209ENST00000494852 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
COL4A2-209ENST00000494852 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
COL4A2-209ENST00000494852 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
COL4A2-209ENST00000494852 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms