RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HSD52Q0P140 79 aa9.04□□□□□ -0.96
LIME1-209ENST00000494776 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
LIME1-209ENST00000494776 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
LIME1-209ENST00000494776 CDIP1Q9H305 208 aa9.03□□□□□ -0.96
LIME1-209ENST00000494776 H0YGX0 51 aa9.02□□□□□ -0.97
LIME1-209ENST00000494776 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
LIME1-209ENST00000494776 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
LIME1-209ENST00000494776 CD164Q04900 197 aa9□□□□□ -0.97
LIME1-209ENST00000494776 SNHG12Q9BXW3 62 aa8.98□□□□□ -0.97
LIME1-209ENST00000494776 A0A0G2JQZ4 141 aa8.96□□□□□ -0.98
LIME1-209ENST00000494776 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.98
LIME1-209ENST00000494776 PSMB2P49721 201 aa8.95□□□□□ -0.98
LIME1-209ENST00000494776 OCIAD2Q56VL3 154 aa8.95□□□□□ -0.98
LIME1-209ENST00000494776 K7ERJ3 54 aa8.94□□□□□ -0.98
LIME1-209ENST00000494776 TRIAP1O43715 76 aa8.94□□□□□ -0.98
LIME1-209ENST00000494776 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
LIME1-209ENST00000494776 Q6JHZ5 121 aa8.93□□□□□ -0.98
LIME1-209ENST00000494776 A0A1B0GX51 115 aa8.92□□□□□ -0.98
LIME1-209ENST00000494776 COX6CP09669 75 aa8.92□□□□□ -0.98
LIME1-209ENST00000494776 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
LIME1-209ENST00000494776 GHRHP01286 108 aa8.91□□□□□ -0.98
LIME1-209ENST00000494776 SMIM6P0DI80 62 aa8.91□□□□□ -0.98
LIME1-209ENST00000494776 IGLV8-61A0A075B6I0 122 aa8.9□□□□□ -0.98
LIME1-209ENST00000494776 IGFL1Q6UW32 110 aa8.89□□□□□ -0.99
LIME1-209ENST00000494776 CLEC2BQ92478 149 aa8.89□□□□□ -0.99
LIME1-209ENST00000494776 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 TCL1BO95988 128 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 DNAL4O96015 105 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 Q5XG85 94 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 H3BUT2 72 aa8.87□□□□□ -0.99
LIME1-209ENST00000494776 FABP2P12104 132 aa8.87□□□□□ -0.99
LIME1-209ENST00000494776 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
LIME1-209ENST00000494776 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
LIME1-209ENST00000494776 M0R143 59 aa8.84□□□□□ -0.99
LIME1-209ENST00000494776 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
LIME1-209ENST00000494776 C1orf195Q5TG92 126 aa8.83□□□□□ -1
LIME1-209ENST00000494776 ORMDL1Q9P0S3 153 aa8.83□□□□□ -1
LIME1-209ENST00000494776 H3BMG7 143 aa8.82□□□□□ -1
LIME1-209ENST00000494776 MUC2Q02817 5179 aa8.82□□□□□ -1
LIME1-209ENST00000494776 TSTD3H0UI37 97 aa8.81□□□□□ -1
LIME1-209ENST00000494776 H3BQ85 93 aa8.81□□□□□ -1
LIME1-209ENST00000494776 C9orf92A6NGG3 77 aa8.8□□□□□ -1
LIME1-209ENST00000494776 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
LIME1-209ENST00000494776 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
LIME1-209ENST00000494776 SEC61BP60468 96 aaKnown RBP8.78□□□□□ -1
LIME1-209ENST00000494776 XP32Q5T750 250 aa8.77□□□□□ -1.01
LIME1-209ENST00000494776 TRACP01848 142 aa8.76□□□□□ -1.01
LIME1-209ENST00000494776 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
LIME1-209ENST00000494776 TEN1Q86WV5 123 aa8.76□□□□□ -1.01
LIME1-209ENST00000494776 A0A1B0GV72 72 aa8.75□□□□□ -1.01
LIME1-209ENST00000494776 LST1O00453 97 aa8.74□□□□□ -1.01
LIME1-209ENST00000494776 Q6Q795 121 aa8.74□□□□□ -1.01
LIME1-209ENST00000494776 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
LIME1-209ENST00000494776 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
LIME1-209ENST00000494776 BATFQ16520 125 aa8.72□□□□□ -1.01
LIME1-209ENST00000494776 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
LIME1-209ENST00000494776 A0A087WSZ3 146 aa8.7□□□□□ -1.02
LIME1-209ENST00000494776 UBE2V1Q13404 147 aa8.7□□□□□ -1.02
LIME1-209ENST00000494776 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
LIME1-209ENST00000494776 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
LIME1-209ENST00000494776 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
LIME1-209ENST00000494776 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
LIME1-209ENST00000494776 LYRM7Q5U5X0 104 aa8.66□□□□□ -1.02
LIME1-209ENST00000494776 TRBV7-4A0A0J9YYF1 115 aa8.64□□□□□ -1.03
LIME1-209ENST00000494776 CCKP06307 115 aa8.64□□□□□ -1.03
LIME1-209ENST00000494776 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
LIME1-209ENST00000494776 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
LIME1-209ENST00000494776 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
LIME1-209ENST00000494776 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
LIME1-209ENST00000494776 VPS25Q9BRG1 176 aa8.62□□□□□ -1.03
LIME1-209ENST00000494776 OBSCN-AS1Q96MR7 158 aa8.6□□□□□ -1.03
LIME1-209ENST00000494776 TRBV20-1A0A075B6N2 111 aa8.59□□□□□ -1.03
LIME1-209ENST00000494776 RPL37P61927 97 aaKnown RBP8.59□□□□□ -1.03
LIME1-209ENST00000494776 KRTAP4-1Q9BYQ7 146 aa8.59□□□□□ -1.03
LIME1-209ENST00000494776 Q96NJ1 140 aa8.58□□□□□ -1.04
LIME1-209ENST00000494776 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
LIME1-209ENST00000494776 C9JAW5 83 aa8.57□□□□□ -1.04
LIME1-209ENST00000494776 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
LIME1-209ENST00000494776 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
LIME1-209ENST00000494776 IGKV4-1P06312 121 aa8.55□□□□□ -1.04
LIME1-209ENST00000494776 TAX1BP3O14907 124 aa8.54□□□□□ -1.04
LIME1-209ENST00000494776 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
LIME1-209ENST00000494776 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
LIME1-209ENST00000494776 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
LIME1-209ENST00000494776 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
LIME1-209ENST00000494776 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
LIME1-209ENST00000494776 Q75L30 129 aa8.5□□□□□ -1.05
LIME1-209ENST00000494776 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
LIME1-209ENST00000494776 DSCR10P59022 87 aa8.49□□□□□ -1.05
LIME1-209ENST00000494776 PDE6GP18545 87 aa8.48□□□□□ -1.05
LIME1-209ENST00000494776 Q6ZQT0 140 aa8.48□□□□□ -1.05
LIME1-209ENST00000494776 LOC110117498A0A087WWA1 95 aa8.47□□□□□ -1.05
LIME1-209ENST00000494776 LINC00313P59037 77 aa8.47□□□□□ -1.05
LIME1-209ENST00000494776 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
LIME1-209ENST00000494776 H3BT86 120 aa8.45□□□□□ -1.06
LIME1-209ENST00000494776 IGHV6-1A0A0B4J1U7 121 aa8.44□□□□□ -1.06
LIME1-209ENST00000494776 COL5A1-AS1Q5SY13 56 aa8.44□□□□□ -1.06
LIME1-209ENST00000494776 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
LIME1-209ENST00000494776 A0A1B0GW54 56 aa8.43□□□□□ -1.06
LIME1-209ENST00000494776 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 683.8 ms