RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HSD52Q0P140 79 aa9.04□□□□□ -0.96
LIME1-209ENST00000494776 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
LIME1-209ENST00000494776 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
LIME1-209ENST00000494776 CDIP1Q9H305 208 aa9.03□□□□□ -0.96
LIME1-209ENST00000494776 H0YGX0 51 aa9.02□□□□□ -0.97
LIME1-209ENST00000494776 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
LIME1-209ENST00000494776 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
LIME1-209ENST00000494776 CD164Q04900 197 aa9□□□□□ -0.97
LIME1-209ENST00000494776 SNHG12Q9BXW3 62 aa8.98□□□□□ -0.97
LIME1-209ENST00000494776 A0A0G2JQZ4 141 aa8.96□□□□□ -0.98
LIME1-209ENST00000494776 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.98
LIME1-209ENST00000494776 PSMB2P49721 201 aa8.95□□□□□ -0.98
LIME1-209ENST00000494776 OCIAD2Q56VL3 154 aa8.95□□□□□ -0.98
LIME1-209ENST00000494776 K7ERJ3 54 aa8.94□□□□□ -0.98
LIME1-209ENST00000494776 TRIAP1O43715 76 aa8.94□□□□□ -0.98
LIME1-209ENST00000494776 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
LIME1-209ENST00000494776 Q6JHZ5 121 aa8.93□□□□□ -0.98
LIME1-209ENST00000494776 A0A1B0GX51 115 aa8.92□□□□□ -0.98
LIME1-209ENST00000494776 COX6CP09669 75 aa8.92□□□□□ -0.98
LIME1-209ENST00000494776 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
LIME1-209ENST00000494776 GHRHP01286 108 aa8.91□□□□□ -0.98
LIME1-209ENST00000494776 SMIM6P0DI80 62 aa8.91□□□□□ -0.98
LIME1-209ENST00000494776 IGLV8-61A0A075B6I0 122 aa8.9□□□□□ -0.98
LIME1-209ENST00000494776 IGFL1Q6UW32 110 aa8.89□□□□□ -0.99
LIME1-209ENST00000494776 CLEC2BQ92478 149 aa8.89□□□□□ -0.99
LIME1-209ENST00000494776 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 TCL1BO95988 128 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 DNAL4O96015 105 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 Q5XG85 94 aa8.88□□□□□ -0.99
LIME1-209ENST00000494776 H3BUT2 72 aa8.87□□□□□ -0.99
LIME1-209ENST00000494776 FABP2P12104 132 aa8.87□□□□□ -0.99
LIME1-209ENST00000494776 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
LIME1-209ENST00000494776 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
LIME1-209ENST00000494776 M0R143 59 aa8.84□□□□□ -0.99
LIME1-209ENST00000494776 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
LIME1-209ENST00000494776 C1orf195Q5TG92 126 aa8.83□□□□□ -1
LIME1-209ENST00000494776 ORMDL1Q9P0S3 153 aa8.83□□□□□ -1
LIME1-209ENST00000494776 H3BMG7 143 aa8.82□□□□□ -1
LIME1-209ENST00000494776 MUC2Q02817 5179 aa8.82□□□□□ -1
LIME1-209ENST00000494776 TSTD3H0UI37 97 aa8.81□□□□□ -1
LIME1-209ENST00000494776 H3BQ85 93 aa8.81□□□□□ -1
LIME1-209ENST00000494776 C9orf92A6NGG3 77 aa8.8□□□□□ -1
LIME1-209ENST00000494776 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
LIME1-209ENST00000494776 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
LIME1-209ENST00000494776 SEC61BP60468 96 aaKnown RBP8.78□□□□□ -1
LIME1-209ENST00000494776 XP32Q5T750 250 aa8.77□□□□□ -1.01
LIME1-209ENST00000494776 TRACP01848 142 aa8.76□□□□□ -1.01
LIME1-209ENST00000494776 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
LIME1-209ENST00000494776 TEN1Q86WV5 123 aa8.76□□□□□ -1.01
LIME1-209ENST00000494776 A0A1B0GV72 72 aa8.75□□□□□ -1.01
LIME1-209ENST00000494776 LST1O00453 97 aa8.74□□□□□ -1.01
LIME1-209ENST00000494776 Q6Q795 121 aa8.74□□□□□ -1.01
LIME1-209ENST00000494776 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
LIME1-209ENST00000494776 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
LIME1-209ENST00000494776 BATFQ16520 125 aa8.72□□□□□ -1.01
LIME1-209ENST00000494776 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
LIME1-209ENST00000494776 A0A087WSZ3 146 aa8.7□□□□□ -1.02
LIME1-209ENST00000494776 UBE2V1Q13404 147 aa8.7□□□□□ -1.02
LIME1-209ENST00000494776 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
LIME1-209ENST00000494776 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
LIME1-209ENST00000494776 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
LIME1-209ENST00000494776 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
LIME1-209ENST00000494776 LYRM7Q5U5X0 104 aa8.66□□□□□ -1.02
LIME1-209ENST00000494776 TRBV7-4A0A0J9YYF1 115 aa8.64□□□□□ -1.03
LIME1-209ENST00000494776 CCKP06307 115 aa8.64□□□□□ -1.03
LIME1-209ENST00000494776 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
LIME1-209ENST00000494776 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
LIME1-209ENST00000494776 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
LIME1-209ENST00000494776 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
LIME1-209ENST00000494776 VPS25Q9BRG1 176 aa8.62□□□□□ -1.03
LIME1-209ENST00000494776 OBSCN-AS1Q96MR7 158 aa8.6□□□□□ -1.03
LIME1-209ENST00000494776 TRBV20-1A0A075B6N2 111 aa8.59□□□□□ -1.03
LIME1-209ENST00000494776 RPL37P61927 97 aaKnown RBP8.59□□□□□ -1.03
LIME1-209ENST00000494776 KRTAP4-1Q9BYQ7 146 aa8.59□□□□□ -1.03
LIME1-209ENST00000494776 Q96NJ1 140 aa8.58□□□□□ -1.04
LIME1-209ENST00000494776 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
LIME1-209ENST00000494776 C9JAW5 83 aa8.57□□□□□ -1.04
LIME1-209ENST00000494776 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
LIME1-209ENST00000494776 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
LIME1-209ENST00000494776 IGKV4-1P06312 121 aa8.55□□□□□ -1.04
LIME1-209ENST00000494776 TAX1BP3O14907 124 aa8.54□□□□□ -1.04
LIME1-209ENST00000494776 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
LIME1-209ENST00000494776 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
LIME1-209ENST00000494776 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
LIME1-209ENST00000494776 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
LIME1-209ENST00000494776 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
LIME1-209ENST00000494776 Q75L30 129 aa8.5□□□□□ -1.05
LIME1-209ENST00000494776 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
LIME1-209ENST00000494776 DSCR10P59022 87 aa8.49□□□□□ -1.05
LIME1-209ENST00000494776 PDE6GP18545 87 aa8.48□□□□□ -1.05
LIME1-209ENST00000494776 Q6ZQT0 140 aa8.48□□□□□ -1.05
LIME1-209ENST00000494776 LOC110117498A0A087WWA1 95 aa8.47□□□□□ -1.05
LIME1-209ENST00000494776 LINC00313P59037 77 aa8.47□□□□□ -1.05
LIME1-209ENST00000494776 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
LIME1-209ENST00000494776 H3BT86 120 aa8.45□□□□□ -1.06
LIME1-209ENST00000494776 IGHV6-1A0A0B4J1U7 121 aa8.44□□□□□ -1.06
LIME1-209ENST00000494776 COL5A1-AS1Q5SY13 56 aa8.44□□□□□ -1.06
LIME1-209ENST00000494776 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
LIME1-209ENST00000494776 A0A1B0GW54 56 aa8.43□□□□□ -1.06
LIME1-209ENST00000494776 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms