RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 Q8N377 158 aa8.57□□□□□ -1.04
BRCA1-223ENST00000494123 H3BUT2 72 aa8.56□□□□□ -1.04
BRCA1-223ENST00000494123 MOBPQ13875 183 aa8.56□□□□□ -1.04
BRCA1-223ENST00000494123 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
BRCA1-223ENST00000494123 GHRHP01286 108 aa8.55□□□□□ -1.04
BRCA1-223ENST00000494123 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
BRCA1-223ENST00000494123 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
BRCA1-223ENST00000494123 PPDPFLQ8WWR9 84 aa8.54□□□□□ -1.04
BRCA1-223ENST00000494123 F8WEM9 126 aa8.54□□□□□ -1.04
BRCA1-223ENST00000494123 LST1O00453 97 aa8.54□□□□□ -1.04
BRCA1-223ENST00000494123 Q8NBF4 154 aa8.54□□□□□ -1.04
BRCA1-223ENST00000494123 TRACP01848 142 aa8.53□□□□□ -1.04
BRCA1-223ENST00000494123 SMIM29Q86T20 159 aa8.53□□□□□ -1.04
BRCA1-223ENST00000494123 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
BRCA1-223ENST00000494123 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
BRCA1-223ENST00000494123 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
BRCA1-223ENST00000494123 ORMDL1Q9P0S3 153 aa8.52□□□□□ -1.05
BRCA1-223ENST00000494123 TCL1BO95988 128 aa8.51□□□□□ -1.05
BRCA1-223ENST00000494123 FABP2P12104 132 aa8.51□□□□□ -1.05
BRCA1-223ENST00000494123 TNXBP22105 4242 aa8.5□□□□□ -1.05
BRCA1-223ENST00000494123 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
BRCA1-223ENST00000494123 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
BRCA1-223ENST00000494123 A0A1W2PPM0 123 aa8.49□□□□□ -1.05
BRCA1-223ENST00000494123 H3BQ85 93 aa8.49□□□□□ -1.05
BRCA1-223ENST00000494123 TMEM256-PLSCR3K7ERE1 68 aa8.47□□□□□ -1.05
BRCA1-223ENST00000494123 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
BRCA1-223ENST00000494123 NDUFV3P56181 108 aaKnown RBP8.46□□□□□ -1.06
BRCA1-223ENST00000494123 SPINK1P00995 79 aa8.43□□□□□ -1.06
BRCA1-223ENST00000494123 BAALC-AS2P0C853 105 aa8.43□□□□□ -1.06
BRCA1-223ENST00000494123 Q6JHZ5 121 aa8.43□□□□□ -1.06
BRCA1-223ENST00000494123 IGLV8-61A0A075B6I0 122 aa8.42□□□□□ -1.06
BRCA1-223ENST00000494123 H3BMG7 143 aa8.42□□□□□ -1.06
BRCA1-223ENST00000494123 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
BRCA1-223ENST00000494123 C9JAW5 83 aa8.41□□□□□ -1.06
BRCA1-223ENST00000494123 UBE2V1Q13404 147 aa8.41□□□□□ -1.06
BRCA1-223ENST00000494123 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
BRCA1-223ENST00000494123 A0A0G2JQZ4 141 aa8.4□□□□□ -1.07
BRCA1-223ENST00000494123 A0A1B0GV72 72 aa8.4□□□□□ -1.07
BRCA1-223ENST00000494123 IGFL1Q6UW32 110 aa8.39□□□□□ -1.07
BRCA1-223ENST00000494123 ANKRD29Q8N6D5 301 aa8.39□□□□□ -1.07
BRCA1-223ENST00000494123 CD164Q04900 197 aa8.38□□□□□ -1.07
BRCA1-223ENST00000494123 HERC1Q15751 4861 aa8.37□□□□□ -1.07
BRCA1-223ENST00000494123 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
BRCA1-223ENST00000494123 K7EP34 96 aa8.35□□□□□ -1.07
BRCA1-223ENST00000494123 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
BRCA1-223ENST00000494123 MTURNQ8N3F0 131 aa8.34□□□□□ -1.07
BRCA1-223ENST00000494123 H3BT86 120 aa8.33□□□□□ -1.08
BRCA1-223ENST00000494123 RBM3P98179 157 aaKnown RBP8.33□□□□□ -1.08
BRCA1-223ENST00000494123 GTF2H5Q6ZYL4 71 aa8.32□□□□□ -1.08
BRCA1-223ENST00000494123 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
BRCA1-223ENST00000494123 JMJD7-PLA2G4BH0Y9G9 81 aa8.32□□□□□ -1.08
BRCA1-223ENST00000494123 DSCR8Q96T75 97 aa8.32□□□□□ -1.08
BRCA1-223ENST00000494123 TRBV7-7A0A0K0K1E9 115 aa8.3□□□□□ -1.08
BRCA1-223ENST00000494123 PRR4Q16378 134 aa8.3□□□□□ -1.08
BRCA1-223ENST00000494123 TEN1Q86WV5 123 aa8.3□□□□□ -1.08
BRCA1-223ENST00000494123 Q6Q795 121 aa8.29□□□□□ -1.08
BRCA1-223ENST00000494123 TRBV7-4A0A0J9YYF1 115 aa8.28□□□□□ -1.08
BRCA1-223ENST00000494123 CCKP06307 115 aa8.27□□□□□ -1.09
BRCA1-223ENST00000494123 Q5XG85 94 aa8.27□□□□□ -1.09
BRCA1-223ENST00000494123 VPS25Q9BRG1 176 aa8.26□□□□□ -1.09
BRCA1-223ENST00000494123 A0A1W2PNM2 257 aa8.25□□□□□ -1.09
BRCA1-223ENST00000494123 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
BRCA1-223ENST00000494123 A0A087WSZ3 146 aa8.24□□□□□ -1.09
BRCA1-223ENST00000494123 SS18L2Q9UHA2 77 aa8.24□□□□□ -1.09
BRCA1-223ENST00000494123 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-223ENST00000494123 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-223ENST00000494123 OBSCN-AS1Q96MR7 158 aa8.23□□□□□ -1.09
BRCA1-223ENST00000494123 PRO0461Q9UI25 63 aa8.23□□□□□ -1.09
BRCA1-223ENST00000494123 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
BRCA1-223ENST00000494123 LOC110117498A0A087WWA1 95 aa8.22□□□□□ -1.09
BRCA1-223ENST00000494123 PDE6GP18545 87 aa8.22□□□□□ -1.09
BRCA1-223ENST00000494123 F8W1H4 67 aa8.21□□□□□ -1.1
BRCA1-223ENST00000494123 Q6ZQT0 140 aa8.21□□□□□ -1.1
BRCA1-223ENST00000494123 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
BRCA1-223ENST00000494123 C1orf195Q5TG92 126 aa8.19□□□□□ -1.1
BRCA1-223ENST00000494123 A0A1B0GV90 55 aa8.18□□□□□ -1.1
BRCA1-223ENST00000494123 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
BRCA1-223ENST00000494123 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
BRCA1-223ENST00000494123 A0A1B0GW54 56 aa8.14□□□□□ -1.11
BRCA1-223ENST00000494123 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
BRCA1-223ENST00000494123 ETDBQ3ZM63 59 aa8.12□□□□□ -1.11
BRCA1-223ENST00000494123 CDIP1Q9H305 208 aa8.1□□□□□ -1.11
BRCA1-223ENST00000494123 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
BRCA1-223ENST00000494123 Q96NJ1 140 aa8.09□□□□□ -1.11
BRCA1-223ENST00000494123 SIGMAR1Q99720 223 aa8.08□□□□□ -1.12
BRCA1-223ENST00000494123 IGKV4-1P06312 121 aa8.07□□□□□ -1.12
BRCA1-223ENST00000494123 DEFB116Q30KQ4 102 aa8.07□□□□□ -1.12
BRCA1-223ENST00000494123 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
BRCA1-223ENST00000494123 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
BRCA1-223ENST00000494123 NREPQ16612 68 aa8.05□□□□□ -1.12
BRCA1-223ENST00000494123 LPAP08519 4548 aa8.04□□□□□ -1.12
BRCA1-223ENST00000494123 LRP2P98164 4655 aa8.02□□□□□ -1.12
BRCA1-223ENST00000494123 J3KT08 172 aa8.02□□□□□ -1.13
BRCA1-223ENST00000494123 XP32Q5T750 250 aa7.98□□□□□ -1.13
BRCA1-223ENST00000494123 UBL5Q9BZL1 73 aa7.97□□□□□ -1.13
BRCA1-223ENST00000494123 NDUFB1O75438 58 aa7.96□□□□□ -1.13
BRCA1-223ENST00000494123 Q6ZVQ6 151 aa7.96□□□□□ -1.13
BRCA1-223ENST00000494123 LINC00846Q9NV44 126 aa7.96□□□□□ -1.13
BRCA1-223ENST00000494123 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.14
BRCA1-223ENST00000494123 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms