RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 HAMPP81172 84 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 TMEM14BQ9NUH8 114 aa1.57□□□□□ -2.16
GTF3A-208ENST00000493903 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 SMR3BP02814 79 aaPredicted RBP1.56□□□□□ -2.16
GTF3A-208ENST00000493903 SPART-AS1P0CW21 52 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 KRTAP10-4P60372 401 aaPredicted RBP1.56□□□□□ -2.16
GTF3A-208ENST00000493903 WT1-ASQ06250 92 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 INSL4Q14641 139 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 CYP2G1PQ6ZSU1 146 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 PPP1R1CQ8WVI7 109 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 C12orf57Q99622 126 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 BET1LQ9NYM9 111 aa1.56□□□□□ -2.16
GTF3A-208ENST00000493903 C20orf202A1L168 122 aa1.55□□□□□ -2.16
GTF3A-208ENST00000493903 I3L2K1 104 aa1.55□□□□□ -2.16
GTF3A-208ENST00000493903 HTN3P15516 51 aa1.55□□□□□ -2.16
GTF3A-208ENST00000493903 Q8N8P6 123 aa1.55□□□□□ -2.16
GTF3A-208ENST00000493903 A0A087WTM6 91 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 TRBV30A0A0K0K1B3 111 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 TRBV10-3A0A0K0K1G6 114 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 A8MTW9 85 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 TRAPPC2P0DI81 140 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 TRAPPC2BP0DI82 140 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 MT1HL1P0DM35 61 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 DEFB1P60022 68 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 NPC2P61916 151 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 PSMG4Q5JS54 123 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 MRPL54Q6P161 138 aaKnown RBP1.54□□□□□ -2.16
GTF3A-208ENST00000493903 DEFB104AQ8WTQ1 72 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 NDUFA4L2Q9NRX3 87 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 RABAC1Q9UI14 185 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
GTF3A-208ENST00000493903 CCL18P55774 89 aa1.53□□□□□ -2.16
GTF3A-208ENST00000493903 KLKP1Q107X0 134 aa1.53□□□□□ -2.16
GTF3A-208ENST00000493903 CATR1Q13166 79 aa1.53□□□□□ -2.16
GTF3A-208ENST00000493903 ZNF56Q15929 161 aa1.53□□□□□ -2.16
GTF3A-208ENST00000493903 C8orf59Q8N0T1 100 aaPredicted RBP1.53□□□□□ -2.16
GTF3A-208ENST00000493903 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
GTF3A-208ENST00000493903 AP4S1Q9Y587 144 aa1.53□□□□□ -2.16
GTF3A-208ENST00000493903 LPAP08519 4548 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 DEFB130BP0DP73 79 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 DEFB130AP0DP74 79 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 GNGT1P63211 74 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 PRCDQ00LT1 54 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 S100A7L2Q5SY68 101 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 ZNF818PQ6ZRF7 136 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 C14orf144Q96I85 54 aa1.52□□□□□ -2.17
GTF3A-208ENST00000493903 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
GTF3A-208ENST00000493903 A0A096LPF7 62 aa1.51□□□□□ -2.17
GTF3A-208ENST00000493903 H3BNG1 76 aa1.51□□□□□ -2.17
GTF3A-208ENST00000493903 IGLC1P0CG04 106 aa1.51□□□□□ -2.17
GTF3A-208ENST00000493903 C9orf153Q5TBE3 101 aa1.51□□□□□ -2.17
GTF3A-208ENST00000493903 Q86TA4 180 aa1.51□□□□□ -2.17
GTF3A-208ENST00000493903 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
GTF3A-208ENST00000493903 SYNE2Q8WXH0 6885 aaKnown RBP1.5□□□□□ -2.17
GTF3A-208ENST00000493903 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.5□□□□□ -2.17
GTF3A-208ENST00000493903 ASIPP42127 132 aa1.5□□□□□ -2.17
GTF3A-208ENST00000493903 UBE2D1P51668 147 aa1.5□□□□□ -2.17
GTF3A-208ENST00000493903 SSBP1Q04837 148 aaKnown RBP1.5□□□□□ -2.17
GTF3A-208ENST00000493903 WFDC2Q14508 124 aa1.5□□□□□ -2.17
GTF3A-208ENST00000493903 SPINK13Q1W4C9 94 aa1.5□□□□□ -2.17
GTF3A-208ENST00000493903 SPINK9Q5DT21 86 aa1.5□□□□□ -2.17
GTF3A-208ENST00000493903 FXYD6Q9H0Q3 95 aa1.5□□□□□ -2.17
GTF3A-208ENST00000493903 TRAV30A0A087WSZ9 112 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 TRAV1-2A0A0B4J238 106 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 RBAKDNA6NC62 111 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 SMIM6P0DI80 62 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 RBM3P98179 157 aaKnown RBP1.49□□□□□ -2.17
GTF3A-208ENST00000493903 LELP1Q5T871 98 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 GTF2H5Q6ZYL4 71 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 WFDC10BQ8IUB3 73 aa1.49□□□□□ -2.17
GTF3A-208ENST00000493903 TMEM263Q8WUH6 116 aaKnown RBP1.49□□□□□ -2.17
GTF3A-208ENST00000493903 NOP10Q9NPE3 64 aaKnown RBP1.49□□□□□ -2.17
GTF3A-208ENST00000493903 TIMM8BQ9Y5J9 83 aaPredicted RBP1.49□□□□□ -2.17
GTF3A-208ENST00000493903 TRAV13-2A0A0B4J235 113 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 PDCD5O14737 125 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 SIX6O95475 246 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 SNCAP37840 140 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 GNG2P59768 71 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 C5orf38Q86SI9 138 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 C20orf197Q8N268 126 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 SVBPQ8N300 66 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 COX7B2Q8TF08 81 aa1.48□□□□□ -2.17
GTF3A-208ENST00000493903 MUC17Q685J3 4493 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 A0A1W2PPM0 123 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 SPINK4O60575 86 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 ELOF1P60002 83 aaKnown RBP1.47□□□□□ -2.17
GTF3A-208ENST00000493903 NMSQ5H8A3 153 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 LINC01556Q5JQF7 62 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 DSCR8Q96T75 97 aa1.47□□□□□ -2.17
GTF3A-208ENST00000493903 FAM24AA6NFZ4 105 aa1.46□□□□□ -2.18
GTF3A-208ENST00000493903 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
GTF3A-208ENST00000493903 SSSCA1O60232 199 aa1.46□□□□□ -2.18
GTF3A-208ENST00000493903 IFITM1P13164 125 aa1.46□□□□□ -2.18
GTF3A-208ENST00000493903 HTN1P15515 57 aa1.46□□□□□ -2.18
GTF3A-208ENST00000493903 ATP5EP56381 51 aaPredicted RBP1.46□□□□□ -2.18
GTF3A-208ENST00000493903 HSD52Q0P140 79 aa1.46□□□□□ -2.18
GTF3A-208ENST00000493903 NEBP20929 6669 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms