RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
SNX17-208ENST00000493711 SPRR4Q96PI1 79 aa7.49□□□□□ -1.21
SNX17-208ENST00000493711 DNAL4O96015 105 aa7.48□□□□□ -1.21
SNX17-208ENST00000493711 FABP2P12104 132 aa7.48□□□□□ -1.21
SNX17-208ENST00000493711 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
SNX17-208ENST00000493711 PPDPFLQ8WWR9 84 aa7.48□□□□□ -1.21
SNX17-208ENST00000493711 A0A1W2PPM0 123 aa7.47□□□□□ -1.21
SNX17-208ENST00000493711 TRACP01848 142 aa7.47□□□□□ -1.21
SNX17-208ENST00000493711 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
SNX17-208ENST00000493711 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
SNX17-208ENST00000493711 FAT1Q14517 4588 aa7.47□□□□□ -1.21
SNX17-208ENST00000493711 TEX49A0A1B0GTD5 131 aa7.46□□□□□ -1.22
SNX17-208ENST00000493711 LST1O00453 97 aa7.46□□□□□ -1.22
SNX17-208ENST00000493711 LINC00483Q53H64 154 aa7.46□□□□□ -1.22
SNX17-208ENST00000493711 Q6ZQY7 126 aa7.46□□□□□ -1.22
SNX17-208ENST00000493711 FAM218AQ96MZ4 157 aa7.46□□□□□ -1.22
SNX17-208ENST00000493711 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.22
SNX17-208ENST00000493711 KRTAP4-2Q9BYR5 136 aa7.46□□□□□ -1.22
SNX17-208ENST00000493711 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
SNX17-208ENST00000493711 SPRR1BP22528 89 aa7.45□□□□□ -1.22
SNX17-208ENST00000493711 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
SNX17-208ENST00000493711 OXTP01178 125 aa7.44□□□□□ -1.22
SNX17-208ENST00000493711 CRYGAP11844 174 aa7.44□□□□□ -1.22
SNX17-208ENST00000493711 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
SNX17-208ENST00000493711 VPS13BQ7Z7G8 4022 aa7.44□□□□□ -1.22
SNX17-208ENST00000493711 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
SNX17-208ENST00000493711 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
SNX17-208ENST00000493711 LAMTOR3Q9UHA4 124 aa7.43□□□□□ -1.22
SNX17-208ENST00000493711 TCL1BO95988 128 aa7.42□□□□□ -1.22
SNX17-208ENST00000493711 DEFB105AQ8NG35 78 aa7.42□□□□□ -1.22
SNX17-208ENST00000493711 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
SNX17-208ENST00000493711 TMEM256-PLSCR3K7ERE1 68 aa7.4□□□□□ -1.22
SNX17-208ENST00000493711 LINC01547P58512 204 aaPredicted RBP7.4□□□□□ -1.22
SNX17-208ENST00000493711 Q8N377 158 aa7.4□□□□□ -1.22
SNX17-208ENST00000493711 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
SNX17-208ENST00000493711 KRTAP4-11Q9BYQ6 195 aa7.4□□□□□ -1.22
SNX17-208ENST00000493711 F8WEM9 126 aa7.39□□□□□ -1.23
SNX17-208ENST00000493711 SPCS1Q9Y6A9 102 aa7.39□□□□□ -1.23
SNX17-208ENST00000493711 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
SNX17-208ENST00000493711 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
SNX17-208ENST00000493711 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
SNX17-208ENST00000493711 LCE5AQ5TCM9 118 aa7.37□□□□□ -1.23
SNX17-208ENST00000493711 GTF2H5Q6ZYL4 71 aa7.37□□□□□ -1.23
SNX17-208ENST00000493711 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
SNX17-208ENST00000493711 BAALC-AS2P0C853 105 aa7.36□□□□□ -1.23
SNX17-208ENST00000493711 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
SNX17-208ENST00000493711 A0A087X002 238 aa7.35□□□□□ -1.23
SNX17-208ENST00000493711 K7EP34 96 aa7.35□□□□□ -1.23
SNX17-208ENST00000493711 UBE2V1Q13404 147 aa7.35□□□□□ -1.23
SNX17-208ENST00000493711 SMIM29Q86T20 159 aa7.35□□□□□ -1.23
SNX17-208ENST00000493711 Q8NBF4 154 aa7.35□□□□□ -1.23
SNX17-208ENST00000493711 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
SNX17-208ENST00000493711 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
SNX17-208ENST00000493711 C9JAW5 83 aa7.34□□□□□ -1.23
SNX17-208ENST00000493711 H3BMG7 143 aa7.34□□□□□ -1.23
SNX17-208ENST00000493711 NDUFV3P56181 108 aaKnown RBP7.34□□□□□ -1.23
SNX17-208ENST00000493711 KRTAP10-8P60410 259 aa7.34□□□□□ -1.23
SNX17-208ENST00000493711 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
SNX17-208ENST00000493711 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
SNX17-208ENST00000493711 H3BT86 120 aa7.33□□□□□ -1.24
SNX17-208ENST00000493711 KRTAP13-2Q52LG2 175 aa7.33□□□□□ -1.24
SNX17-208ENST00000493711 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
SNX17-208ENST00000493711 Q6JHZ5 121 aa7.33□□□□□ -1.24
SNX17-208ENST00000493711 MOBPQ13875 183 aa7.32□□□□□ -1.24
SNX17-208ENST00000493711 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
SNX17-208ENST00000493711 ANKRD29Q8N6D5 301 aa7.31□□□□□ -1.24
SNX17-208ENST00000493711 PKHD1L1Q86WI1 4243 aa7.31□□□□□ -1.24
SNX17-208ENST00000493711 SPAG11AQ6PDA7 123 aa7.3□□□□□ -1.24
SNX17-208ENST00000493711 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
SNX17-208ENST00000493711 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
SNX17-208ENST00000493711 CD164Q04900 197 aa7.27□□□□□ -1.25
SNX17-208ENST00000493711 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
SNX17-208ENST00000493711 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
SNX17-208ENST00000493711 F8W1H4 67 aa7.26□□□□□ -1.25
SNX17-208ENST00000493711 RBM3P98179 157 aaKnown RBP7.26□□□□□ -1.25
SNX17-208ENST00000493711 SPINK1P00995 79 aa7.25□□□□□ -1.25
SNX17-208ENST00000493711 PDE6GP18545 87 aa7.25□□□□□ -1.25
SNX17-208ENST00000493711 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
SNX17-208ENST00000493711 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
SNX17-208ENST00000493711 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
SNX17-208ENST00000493711 PRO0461Q9UI25 63 aa7.23□□□□□ -1.25
SNX17-208ENST00000493711 A0A1B0GV90 55 aa7.22□□□□□ -1.25
SNX17-208ENST00000493711 Q6Q795 121 aa7.22□□□□□ -1.25
SNX17-208ENST00000493711 OBSCN-AS1Q96MR7 158 aa7.22□□□□□ -1.25
SNX17-208ENST00000493711 TRBV7-4A0A0J9YYF1 115 aa7.21□□□□□ -1.26
SNX17-208ENST00000493711 TEN1Q86WV5 123 aa7.21□□□□□ -1.26
SNX17-208ENST00000493711 MTURNQ8N3F0 131 aa7.21□□□□□ -1.26
SNX17-208ENST00000493711 LOC110117498A0A087WWA1 95 aa7.2□□□□□ -1.26
SNX17-208ENST00000493711 LIMD2Q9BT23 127 aa7.2□□□□□ -1.26
SNX17-208ENST00000493711 RNF213Q63HN8 5207 aa7.19□□□□□ -1.26
SNX17-208ENST00000493711 A0A1B0GV72 72 aa7.18□□□□□ -1.26
SNX17-208ENST00000493711 A0A1B0GW54 56 aa7.18□□□□□ -1.26
SNX17-208ENST00000493711 CDIP1Q9H305 208 aa7.18□□□□□ -1.26
SNX17-208ENST00000493711 LRP1Q07954 4544 aaKnown RBP7.17□□□□□ -1.26
SNX17-208ENST00000493711 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
SNX17-208ENST00000493711 CCKP06307 115 aa7.17□□□□□ -1.26
SNX17-208ENST00000493711 Q5XG85 94 aa7.17□□□□□ -1.26
SNX17-208ENST00000493711 HRCT1Q6UXD1 115 aa7.16□□□□□ -1.26
SNX17-208ENST00000493711 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
SNX17-208ENST00000493711 SS18L2Q9UHA2 77 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms