RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CTAG1AP78358 180 aa6.74□□□□□ -1.33
CTSA-209ENST00000493522 LAMTOR3Q9UHA4 124 aa6.74□□□□□ -1.33
CTSA-209ENST00000493522 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
CTSA-209ENST00000493522 Q6ZQY7 126 aa6.73□□□□□ -1.33
CTSA-209ENST00000493522 H0YGX0 51 aa6.72□□□□□ -1.33
CTSA-209ENST00000493522 TRIAP1O43715 76 aa6.72□□□□□ -1.33
CTSA-209ENST00000493522 PSMB2P49721 201 aa6.72□□□□□ -1.33
CTSA-209ENST00000493522 LINC01547P58512 204 aaPredicted RBP6.72□□□□□ -1.33
CTSA-209ENST00000493522 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
CTSA-209ENST00000493522 SNCGO76070 127 aa6.7□□□□□ -1.34
CTSA-209ENST00000493522 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
CTSA-209ENST00000493522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.7□□□□□ -1.34
CTSA-209ENST00000493522 SSBP3-AS1Q7Z2R9 100 aa6.7□□□□□ -1.34
CTSA-209ENST00000493522 FAM218AQ96MZ4 157 aa6.7□□□□□ -1.34
CTSA-209ENST00000493522 Q8N377 158 aa6.69□□□□□ -1.34
CTSA-209ENST00000493522 F8WEM9 126 aa6.68□□□□□ -1.34
CTSA-209ENST00000493522 COX6CP09669 75 aa6.68□□□□□ -1.34
CTSA-209ENST00000493522 PRR4Q16378 134 aa6.68□□□□□ -1.34
CTSA-209ENST00000493522 SMIM29Q86T20 159 aa6.68□□□□□ -1.34
CTSA-209ENST00000493522 CLEC2BQ92478 149 aa6.68□□□□□ -1.34
CTSA-209ENST00000493522 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
CTSA-209ENST00000493522 BATFQ16520 125 aa6.67□□□□□ -1.34
CTSA-209ENST00000493522 A0A1B0GX51 115 aa6.66□□□□□ -1.34
CTSA-209ENST00000493522 RETNLBQ9BQ08 111 aa6.66□□□□□ -1.34
CTSA-209ENST00000493522 SPINK1P00995 79 aa6.65□□□□□ -1.34
CTSA-209ENST00000493522 PPDPFLQ8WWR9 84 aa6.65□□□□□ -1.34
CTSA-209ENST00000493522 DNAL4O96015 105 aa6.64□□□□□ -1.35
CTSA-209ENST00000493522 SCGB1C2P0DMR2 95 aa6.64□□□□□ -1.35
CTSA-209ENST00000493522 OCIAD2Q56VL3 154 aa6.64□□□□□ -1.35
CTSA-209ENST00000493522 HRCT1Q6UXD1 115 aa6.64□□□□□ -1.35
CTSA-209ENST00000493522 SNHG12Q9BXW3 62 aa6.63□□□□□ -1.35
CTSA-209ENST00000493522 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
CTSA-209ENST00000493522 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
CTSA-209ENST00000493522 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
CTSA-209ENST00000493522 A0A0G2JQZ4 141 aa6.61□□□□□ -1.35
CTSA-209ENST00000493522 GHRHP01286 108 aa6.61□□□□□ -1.35
CTSA-209ENST00000493522 FABP2P12104 132 aa6.6□□□□□ -1.35
CTSA-209ENST00000493522 LIMD2Q9BT23 127 aa6.6□□□□□ -1.35
CTSA-209ENST00000493522 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
CTSA-209ENST00000493522 H3BUT2 72 aa6.59□□□□□ -1.35
CTSA-209ENST00000493522 LST1O00453 97 aa6.59□□□□□ -1.35
CTSA-209ENST00000493522 CD164Q04900 197 aa6.59□□□□□ -1.35
CTSA-209ENST00000493522 Q6JHZ5 121 aa6.59□□□□□ -1.35
CTSA-209ENST00000493522 IGLV8-61A0A075B6I0 122 aa6.58□□□□□ -1.36
CTSA-209ENST00000493522 TRACP01848 142 aa6.58□□□□□ -1.36
CTSA-209ENST00000493522 NDUFV3P56181 108 aaKnown RBP6.58□□□□□ -1.36
CTSA-209ENST00000493522 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
CTSA-209ENST00000493522 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
CTSA-209ENST00000493522 IGLV7-46A0A075B6I9 117 aa6.56□□□□□ -1.36
CTSA-209ENST00000493522 H3BQ85 93 aa6.56□□□□□ -1.36
CTSA-209ENST00000493522 MUC17Q685J3 4493 aa6.55□□□□□ -1.36
CTSA-209ENST00000493522 A0A1B0GV72 72 aa6.55□□□□□ -1.36
CTSA-209ENST00000493522 TCL1BO95988 128 aa6.55□□□□□ -1.36
CTSA-209ENST00000493522 ATXN8Q156A1 80 aa6.55□□□□□ -1.36
CTSA-209ENST00000493522 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
CTSA-209ENST00000493522 H3BMG7 143 aa6.54□□□□□ -1.36
CTSA-209ENST00000493522 TMEM256-PLSCR3K7ERE1 68 aa6.53□□□□□ -1.36
CTSA-209ENST00000493522 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
CTSA-209ENST00000493522 XP32Q5T750 250 aa6.53□□□□□ -1.36
CTSA-209ENST00000493522 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
CTSA-209ENST00000493522 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
CTSA-209ENST00000493522 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
CTSA-209ENST00000493522 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
CTSA-209ENST00000493522 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
CTSA-209ENST00000493522 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
CTSA-209ENST00000493522 Q5XG85 94 aa6.5□□□□□ -1.37
CTSA-209ENST00000493522 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
CTSA-209ENST00000493522 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
CTSA-209ENST00000493522 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
CTSA-209ENST00000493522 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
CTSA-209ENST00000493522 COL5A1-AS1Q5SY13 56 aa6.48□□□□□ -1.37
CTSA-209ENST00000493522 CDIP1Q9H305 208 aa6.48□□□□□ -1.37
CTSA-209ENST00000493522 C9JAW5 83 aa6.47□□□□□ -1.37
CTSA-209ENST00000493522 TEN1Q86WV5 123 aa6.47□□□□□ -1.37
CTSA-209ENST00000493522 KRTAP13-3Q3SY46 172 aa6.46□□□□□ -1.38
CTSA-209ENST00000493522 C1orf195Q5TG92 126 aa6.46□□□□□ -1.38
CTSA-209ENST00000493522 Q6Q795 121 aa6.46□□□□□ -1.38
CTSA-209ENST00000493522 SS18L2Q9UHA2 77 aa6.46□□□□□ -1.38
CTSA-209ENST00000493522 A0A1W2PNM2 257 aa6.45□□□□□ -1.38
CTSA-209ENST00000493522 A0A087WSZ3 146 aa6.44□□□□□ -1.38
CTSA-209ENST00000493522 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
CTSA-209ENST00000493522 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
CTSA-209ENST00000493522 SPCS1Q9Y6A9 102 aa6.44□□□□□ -1.38
CTSA-209ENST00000493522 CCKP06307 115 aa6.43□□□□□ -1.38
CTSA-209ENST00000493522 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
CTSA-209ENST00000493522 VPS25Q9BRG1 176 aa6.43□□□□□ -1.38
CTSA-209ENST00000493522 TRBV7-4A0A0J9YYF1 115 aa6.42□□□□□ -1.38
CTSA-209ENST00000493522 MTURNQ8N3F0 131 aa6.42□□□□□ -1.38
CTSA-209ENST00000493522 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
CTSA-209ENST00000493522 JMJD7-PLA2G4BH0Y9G9 81 aa6.4□□□□□ -1.38
CTSA-209ENST00000493522 H3BT86 120 aa6.4□□□□□ -1.38
CTSA-209ENST00000493522 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
CTSA-209ENST00000493522 K7EP34 96 aa6.37□□□□□ -1.39
CTSA-209ENST00000493522 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
CTSA-209ENST00000493522 Q6ZQT0 140 aa6.36□□□□□ -1.39
CTSA-209ENST00000493522 SIGMAR1Q99720 223 aa6.36□□□□□ -1.39
CTSA-209ENST00000493522 Q96NJ1 140 aa6.35□□□□□ -1.39
CTSA-209ENST00000493522 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
CTSA-209ENST00000493522 PDE6GP18545 87 aa6.34□□□□□ -1.39
CTSA-209ENST00000493522 OBSCN-AS1Q96MR7 158 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms