RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 LUZP6Q538Z0 58 aa10.01□□□□□ -0.81
BRAT1-206ENST00000493232 CSAG1Q6PB30 78 aa9.99□□□□□ -0.81
BRAT1-206ENST00000493232 M0R2T5 61 aa9.99□□□□□ -0.81
BRAT1-206ENST00000493232 Q75L30 129 aa9.98□□□□□ -0.81
BRAT1-206ENST00000493232 Q8NDZ9 215 aa9.96□□□□□ -0.81
BRAT1-206ENST00000493232 LINC00483Q53H64 154 aa9.95□□□□□ -0.82
BRAT1-206ENST00000493232 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
BRAT1-206ENST00000493232 S4R3F8 94 aa9.95□□□□□ -0.82
BRAT1-206ENST00000493232 Q8N9P0 234 aaPredicted RBP9.94□□□□□ -0.82
BRAT1-206ENST00000493232 LAMA2P24043 3122 aaKnown RBP9.94□□□□□ -0.82
BRAT1-206ENST00000493232 LINC00472Q9H8W2 130 aa9.93□□□□□ -0.82
BRAT1-206ENST00000493232 DMAC1Q96GE9 116 aa9.93□□□□□ -0.82
BRAT1-206ENST00000493232 Q5W150 140 aa9.91□□□□□ -0.82
BRAT1-206ENST00000493232 CFAP54Q96N23 3096 aa9.89□□□□□ -0.83
BRAT1-206ENST00000493232 UNC80Q8N2C7 3258 aa9.88□□□□□ -0.83
BRAT1-206ENST00000493232 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
BRAT1-206ENST00000493232 MGAQ8IWI9 3026 aa9.86□□□□□ -0.83
BRAT1-206ENST00000493232 PRUNE2Q8WUY3 3088 aa9.86□□□□□ -0.83
BRAT1-206ENST00000493232 SPINK7P58062 85 aa9.86□□□□□ -0.83
BRAT1-206ENST00000493232 KRTAP1-5Q9BYS1 174 aa9.86□□□□□ -0.83
BRAT1-206ENST00000493232 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
BRAT1-206ENST00000493232 TEP1Q99973 2627 aaKnown RBP9.83□□□□□ -0.84
BRAT1-206ENST00000493232 LCE6AA0A183 80 aa9.82□□□□□ -0.84
BRAT1-206ENST00000493232 Q5VSD8 79 aa9.81□□□□□ -0.84
BRAT1-206ENST00000493232 STAB1Q9NY15 2570 aa9.79□□□□□ -0.84
BRAT1-206ENST00000493232 R4GN34 69 aa9.78□□□□□ -0.84
BRAT1-206ENST00000493232 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
BRAT1-206ENST00000493232 UNC79Q9P2D8 2635 aa9.76□□□□□ -0.85
BRAT1-206ENST00000493232 SETXQ7Z333 2677 aaKnown RBP9.76□□□□□ -0.85
BRAT1-206ENST00000493232 WDFY4Q6ZS81 3184 aa9.76□□□□□ -0.85
BRAT1-206ENST00000493232 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
BRAT1-206ENST00000493232 TRIOO75962 3097 aa9.75□□□□□ -0.85
BRAT1-206ENST00000493232 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
BRAT1-206ENST00000493232 AKAP13Q12802 2813 aa9.73□□□□□ -0.85
BRAT1-206ENST00000493232 BAHCC1Q9P281 2608 aa9.72□□□□□ -0.85
BRAT1-206ENST00000493232 DSPP15924 2871 aaKnown RBP9.72□□□□□ -0.85
BRAT1-206ENST00000493232 FP248Q71RG6 208 aaPredicted RBP9.72□□□□□ -0.85
BRAT1-206ENST00000493232 KRTAP10-2P60368 255 aa9.71□□□□□ -0.85
BRAT1-206ENST00000493232 Q5XG85 94 aa9.7□□□□□ -0.86
BRAT1-206ENST00000493232 Q5VV11 94 aa9.7□□□□□ -0.86
BRAT1-206ENST00000493232 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
BRAT1-206ENST00000493232 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
BRAT1-206ENST00000493232 XIRP2A4UGR9 3374 aa9.68□□□□□ -0.86
BRAT1-206ENST00000493232 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
BRAT1-206ENST00000493232 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
BRAT1-206ENST00000493232 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
BRAT1-206ENST00000493232 KRTAP4-16G5E9R7 235 aaPredicted RBP9.63□□□□□ -0.87
BRAT1-206ENST00000493232 Q6ZR54 194 aa9.62□□□□□ -0.87
BRAT1-206ENST00000493232 OXTP01178 125 aa9.6□□□□□ -0.87
BRAT1-206ENST00000493232 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
BRAT1-206ENST00000493232 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
BRAT1-206ENST00000493232 M0QZ58 72 aa9.57□□□□□ -0.88
BRAT1-206ENST00000493232 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
BRAT1-206ENST00000493232 PANO1I0J062 215 aa9.56□□□□□ -0.88
BRAT1-206ENST00000493232 ROMO1P60602 79 aa9.55□□□□□ -0.88
BRAT1-206ENST00000493232 SZT2Q5T011 3432 aa9.54□□□□□ -0.88
BRAT1-206ENST00000493232 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
BRAT1-206ENST00000493232 KRTAP29-1A8MX34 341 aaPredicted RBP9.53□□□□□ -0.88
BRAT1-206ENST00000493232 LAMA1P25391 3075 aa9.51□□□□□ -0.89
BRAT1-206ENST00000493232 FLG2Q5D862 2391 aaPredicted RBP9.51□□□□□ -0.89
BRAT1-206ENST00000493232 A0A0A0MQY5 61 aa9.5□□□□□ -0.89
BRAT1-206ENST00000493232 A0A087X002 238 aa9.48□□□□□ -0.89
BRAT1-206ENST00000493232 NOTCH1P46531 2555 aa9.48□□□□□ -0.89
BRAT1-206ENST00000493232 FRYQ5TBA9 3013 aa9.48□□□□□ -0.89
BRAT1-206ENST00000493232 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
BRAT1-206ENST00000493232 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
BRAT1-206ENST00000493232 GCN1Q92616 2671 aaKnown RBP9.47□□□□□ -0.89
BRAT1-206ENST00000493232 MAP1AP78559 2803 aaPredicted RBP9.45□□□□□ -0.9
BRAT1-206ENST00000493232 PLAC4Q8WY50 150 aa9.45□□□□□ -0.9
BRAT1-206ENST00000493232 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
BRAT1-206ENST00000493232 VCANP13611 3396 aa9.43□□□□□ -0.9
BRAT1-206ENST00000493232 DNAH14Q0VDD8 3507 aa9.42□□□□□ -0.9
BRAT1-206ENST00000493232 CELSR3Q9NYQ7 3312 aa9.41□□□□□ -0.9
BRAT1-206ENST00000493232 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
BRAT1-206ENST00000493232 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
BRAT1-206ENST00000493232 FLNCQ14315 2725 aa9.35□□□□□ -0.91
BRAT1-206ENST00000493232 SPATA8Q6RVD6 105 aa9.35□□□□□ -0.91
BRAT1-206ENST00000493232 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
BRAT1-206ENST00000493232 NOTCH2NLQ7Z3S9 236 aa9.33□□□□□ -0.92
BRAT1-206ENST00000493232 NBEAQ8NFP9 2946 aa9.3□□□□□ -0.92
BRAT1-206ENST00000493232 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
BRAT1-206ENST00000493232 ITPR2Q14571 2701 aa9.29□□□□□ -0.92
BRAT1-206ENST00000493232 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
BRAT1-206ENST00000493232 H3BS24 57 aa9.24□□□□□ -0.93
BRAT1-206ENST00000493232 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
BRAT1-206ENST00000493232 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
BRAT1-206ENST00000493232 ATMQ13315 3056 aa9.22□□□□□ -0.93
BRAT1-206ENST00000493232 BOD1L1Q8NFC6 3051 aa9.22□□□□□ -0.93
BRAT1-206ENST00000493232 ADGRG4Q8IZF6 3080 aa9.21□□□□□ -0.94
BRAT1-206ENST00000493232 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.94
BRAT1-206ENST00000493232 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
BRAT1-206ENST00000493232 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
BRAT1-206ENST00000493232 KALRNO60229 2985 aa9.2□□□□□ -0.94
BRAT1-206ENST00000493232 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
BRAT1-206ENST00000493232 FRYLO94915 3013 aa9.19□□□□□ -0.94
BRAT1-206ENST00000493232 A8MUU9 505 aa9.18□□□□□ -0.94
BRAT1-206ENST00000493232 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
BRAT1-206ENST00000493232 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
BRAT1-206ENST00000493232 HIVEP1P15822 2718 aa9.14□□□□□ -0.95
BRAT1-206ENST00000493232 COL6A3P12111 3177 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms