RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
GPNMB-214ENST00000492858 Q6Q795 121 aa6.35□□□□□ -1.39
GPNMB-214ENST00000492858 HRCT1Q6UXD1 115 aa6.35□□□□□ -1.39
GPNMB-214ENST00000492858 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
GPNMB-214ENST00000492858 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
GPNMB-214ENST00000492858 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
GPNMB-214ENST00000492858 HSD52Q0P140 79 aa6.34□□□□□ -1.39
GPNMB-214ENST00000492858 CEND1Q8N111 149 aa6.34□□□□□ -1.39
GPNMB-214ENST00000492858 PRO1933Q9H354 126 aa6.34□□□□□ -1.39
GPNMB-214ENST00000492858 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
GPNMB-214ENST00000492858 A4D1N5 150 aa6.33□□□□□ -1.4
GPNMB-214ENST00000492858 NPC2P61916 151 aa6.33□□□□□ -1.4
GPNMB-214ENST00000492858 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
GPNMB-214ENST00000492858 Q6ZRX8 168 aa6.32□□□□□ -1.4
GPNMB-214ENST00000492858 FXYD2P54710 66 aa6.31□□□□□ -1.4
GPNMB-214ENST00000492858 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
GPNMB-214ENST00000492858 TSTD3H0UI37 97 aa6.3□□□□□ -1.4
GPNMB-214ENST00000492858 TRAV13-2A0A0B4J235 113 aa6.29□□□□□ -1.4
GPNMB-214ENST00000492858 DDTP30046 118 aa6.29□□□□□ -1.4
GPNMB-214ENST00000492858 BVES-AS1Q5T3Y7 98 aa6.29□□□□□ -1.4
GPNMB-214ENST00000492858 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
GPNMB-214ENST00000492858 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
GPNMB-214ENST00000492858 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
GPNMB-214ENST00000492858 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
GPNMB-214ENST00000492858 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
GPNMB-214ENST00000492858 TRBV7-6A0A0J9YX20 115 aa6.26□□□□□ -1.41
GPNMB-214ENST00000492858 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
GPNMB-214ENST00000492858 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
GPNMB-214ENST00000492858 H7C2G1 150 aa6.24□□□□□ -1.41
GPNMB-214ENST00000492858 ZNF73O43830 326 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-214ENST00000492858 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
GPNMB-214ENST00000492858 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
GPNMB-214ENST00000492858 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
GPNMB-214ENST00000492858 A6NDN8 102 aa6.22□□□□□ -1.41
GPNMB-214ENST00000492858 M0R143 59 aa6.22□□□□□ -1.41
GPNMB-214ENST00000492858 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
GPNMB-214ENST00000492858 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
GPNMB-214ENST00000492858 MT2AP02795 61 aa6.21□□□□□ -1.42
GPNMB-214ENST00000492858 CD164Q04900 197 aa6.21□□□□□ -1.42
GPNMB-214ENST00000492858 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
GPNMB-214ENST00000492858 NHP2Q9NX24 153 aaKnown RBP6.21□□□□□ -1.42
GPNMB-214ENST00000492858 SPRR1BP22528 89 aa6.2□□□□□ -1.42
GPNMB-214ENST00000492858 HINT1P49773 126 aaPredicted RBP6.2□□□□□ -1.42
GPNMB-214ENST00000492858 RAB37Q96AX2 223 aa6.2□□□□□ -1.42
GPNMB-214ENST00000492858 LAMTOR3Q9UHA4 124 aa6.2□□□□□ -1.42
GPNMB-214ENST00000492858 K7ERJ3 54 aa6.18□□□□□ -1.42
GPNMB-214ENST00000492858 Q5XG85 94 aa6.18□□□□□ -1.42
GPNMB-214ENST00000492858 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
GPNMB-214ENST00000492858 MT1FP04733 61 aa6.17□□□□□ -1.42
GPNMB-214ENST00000492858 COX7BP24311 80 aa6.17□□□□□ -1.42
GPNMB-214ENST00000492858 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
GPNMB-214ENST00000492858 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
GPNMB-214ENST00000492858 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
GPNMB-214ENST00000492858 Q1RN00 199 aa6.16□□□□□ -1.42
GPNMB-214ENST00000492858 LINC00575Q6W349 94 aa6.16□□□□□ -1.42
GPNMB-214ENST00000492858 DHRS4-AS1Q9P1J3 65 aa6.16□□□□□ -1.42
GPNMB-214ENST00000492858 H0YGX0 51 aa6.15□□□□□ -1.42
GPNMB-214ENST00000492858 TRIAP1O43715 76 aa6.15□□□□□ -1.42
GPNMB-214ENST00000492858 KRTAP6-3Q3LI67 103 aa6.15□□□□□ -1.42
GPNMB-214ENST00000492858 ATP11AUNQ6ZP68 121 aa6.15□□□□□ -1.42
GPNMB-214ENST00000492858 A0A1B0GX51 115 aa6.14□□□□□ -1.43
GPNMB-214ENST00000492858 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
GPNMB-214ENST00000492858 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
GPNMB-214ENST00000492858 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
GPNMB-214ENST00000492858 VAMP3Q15836 100 aa6.13□□□□□ -1.43
GPNMB-214ENST00000492858 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
GPNMB-214ENST00000492858 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
GPNMB-214ENST00000492858 A0A0G2JQZ4 141 aa6.11□□□□□ -1.43
GPNMB-214ENST00000492858 DEFB105AQ8NG35 78 aa6.11□□□□□ -1.43
GPNMB-214ENST00000492858 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
GPNMB-214ENST00000492858 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
GPNMB-214ENST00000492858 Q75L30 129 aa6.1□□□□□ -1.43
GPNMB-214ENST00000492858 COL5A1-AS1Q5SY13 56 aa6.09□□□□□ -1.43
GPNMB-214ENST00000492858 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-214ENST00000492858 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
GPNMB-214ENST00000492858 LST1O00453 97 aa6.08□□□□□ -1.44
GPNMB-214ENST00000492858 TCL1BO95988 128 aa6.08□□□□□ -1.44
GPNMB-214ENST00000492858 COX6CP09669 75 aa6.08□□□□□ -1.44
GPNMB-214ENST00000492858 OBSCN-AS1Q96MR7 158 aa6.08□□□□□ -1.44
GPNMB-214ENST00000492858 PCP4L1A6NKN8 68 aa6.07□□□□□ -1.44
GPNMB-214ENST00000492858 TRACP01848 142 aa6.07□□□□□ -1.44
GPNMB-214ENST00000492858 BATFQ16520 125 aa6.07□□□□□ -1.44
GPNMB-214ENST00000492858 PPDPFLQ8WWR9 84 aa6.07□□□□□ -1.44
GPNMB-214ENST00000492858 TEX49A0A1B0GTD5 131 aa6.06□□□□□ -1.44
GPNMB-214ENST00000492858 PSMB2P49721 201 aa6.06□□□□□ -1.44
GPNMB-214ENST00000492858 OCIAD2Q56VL3 154 aa6.06□□□□□ -1.44
GPNMB-214ENST00000492858 Q6ZQY7 126 aa6.06□□□□□ -1.44
GPNMB-214ENST00000492858 CLEC2BQ92478 149 aa6.06□□□□□ -1.44
GPNMB-214ENST00000492858 A0A1W2PPM0 123 aa6.04□□□□□ -1.44
GPNMB-214ENST00000492858 H3BUT2 72 aa6.04□□□□□ -1.44
GPNMB-214ENST00000492858 NAA38Q9BRA0 125 aaKnown RBP6.04□□□□□ -1.44
GPNMB-214ENST00000492858 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
GPNMB-214ENST00000492858 H3BQ85 93 aa6.02□□□□□ -1.45
GPNMB-214ENST00000492858 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
GPNMB-214ENST00000492858 SNCGO76070 127 aa6.01□□□□□ -1.45
GPNMB-214ENST00000492858 SCGB1C2P0DMR2 95 aa6.01□□□□□ -1.45
GPNMB-214ENST00000492858 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
GPNMB-214ENST00000492858 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
GPNMB-214ENST00000492858 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
GPNMB-214ENST00000492858 NEBP20929 6669 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms