RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SLC25A20O43772 301 aa4.01□□□□□ -1.77
PDLIM1-204ENST00000492511 FXYD2P54710 66 aa4.01□□□□□ -1.77
PDLIM1-204ENST00000492511 Q6ZQY7 126 aa4.01□□□□□ -1.77
PDLIM1-204ENST00000492511 PRO1933Q9H354 126 aa4.01□□□□□ -1.77
PDLIM1-204ENST00000492511 H7C2G1 150 aa4□□□□□ -1.77
PDLIM1-204ENST00000492511 CD164Q04900 197 aa4□□□□□ -1.77
PDLIM1-204ENST00000492511 CDIP1Q9H305 208 aa4□□□□□ -1.77
PDLIM1-204ENST00000492511 BVES-AS1Q5T3Y7 98 aa3.99□□□□□ -1.77
PDLIM1-204ENST00000492511 RAB37Q96AX2 223 aa3.99□□□□□ -1.77
PDLIM1-204ENST00000492511 FAM218AQ96MZ4 157 aa3.99□□□□□ -1.77
PDLIM1-204ENST00000492511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.98□□□□□ -1.77
PDLIM1-204ENST00000492511 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
PDLIM1-204ENST00000492511 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
PDLIM1-204ENST00000492511 Q5XG85 94 aa3.97□□□□□ -1.77
PDLIM1-204ENST00000492511 LIMD2Q9BT23 127 aa3.97□□□□□ -1.77
PDLIM1-204ENST00000492511 TMEM238LA0A1B0GVL6 79 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 A6NJY4 79 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 H0YGX0 51 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 LCE2BO14633 110 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 HSD52Q0P140 79 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.78
PDLIM1-204ENST00000492511 K7ERJ3 54 aa3.95□□□□□ -1.78
PDLIM1-204ENST00000492511 TRIAP1O43715 76 aa3.95□□□□□ -1.78
PDLIM1-204ENST00000492511 PPDPFLQ8WWR9 84 aa3.95□□□□□ -1.78
PDLIM1-204ENST00000492511 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
PDLIM1-204ENST00000492511 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
PDLIM1-204ENST00000492511 XP32Q5T750 250 aa3.94□□□□□ -1.78
PDLIM1-204ENST00000492511 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
PDLIM1-204ENST00000492511 A0A1B0GX51 115 aa3.93□□□□□ -1.78
PDLIM1-204ENST00000492511 F8WEM9 126 aa3.93□□□□□ -1.78
PDLIM1-204ENST00000492511 H3BUT2 72 aa3.93□□□□□ -1.78
PDLIM1-204ENST00000492511 Q6JHZ5 121 aa3.93□□□□□ -1.78
PDLIM1-204ENST00000492511 CLEC2BQ92478 149 aa3.93□□□□□ -1.78
PDLIM1-204ENST00000492511 SNHG12Q9BXW3 62 aa3.93□□□□□ -1.78
PDLIM1-204ENST00000492511 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
PDLIM1-204ENST00000492511 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
PDLIM1-204ENST00000492511 NDUFV3P56181 108 aaKnown RBP3.92□□□□□ -1.78
PDLIM1-204ENST00000492511 SNCGO76070 127 aa3.9□□□□□ -1.79
PDLIM1-204ENST00000492511 TCL1BO95988 128 aa3.9□□□□□ -1.79
PDLIM1-204ENST00000492511 PSMB2P49721 201 aa3.9□□□□□ -1.79
PDLIM1-204ENST00000492511 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.79
PDLIM1-204ENST00000492511 LOC105371267A0A1B0GV96 52 aa3.89□□□□□ -1.79
PDLIM1-204ENST00000492511 Q6Q795 121 aa3.89□□□□□ -1.79
PDLIM1-204ENST00000492511 H3BMG7 143 aa3.88□□□□□ -1.79
PDLIM1-204ENST00000492511 SMIM6P0DI80 62 aa3.88□□□□□ -1.79
PDLIM1-204ENST00000492511 FABP2P12104 132 aa3.88□□□□□ -1.79
PDLIM1-204ENST00000492511 A0A1W2PNM2 257 aa3.87□□□□□ -1.79
PDLIM1-204ENST00000492511 COX6CP09669 75 aa3.87□□□□□ -1.79
PDLIM1-204ENST00000492511 PCOTHQ58A44 107 aa3.87□□□□□ -1.79
PDLIM1-204ENST00000492511 TEN1Q86WV5 123 aa3.87□□□□□ -1.79
PDLIM1-204ENST00000492511 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
PDLIM1-204ENST00000492511 LST1O00453 97 aa3.86□□□□□ -1.79
PDLIM1-204ENST00000492511 GHRHP01286 108 aa3.86□□□□□ -1.79
PDLIM1-204ENST00000492511 TRACP01848 142 aa3.86□□□□□ -1.79
PDLIM1-204ENST00000492511 Q96NJ1 140 aa3.86□□□□□ -1.79
PDLIM1-204ENST00000492511 A0A087WSZ3 146 aa3.85□□□□□ -1.79
PDLIM1-204ENST00000492511 TMEM256-PLSCR3K7ERE1 68 aa3.85□□□□□ -1.79
PDLIM1-204ENST00000492511 DNAL4O96015 105 aa3.85□□□□□ -1.79
PDLIM1-204ENST00000492511 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
PDLIM1-204ENST00000492511 A0A1B0GV72 72 aa3.84□□□□□ -1.79
PDLIM1-204ENST00000492511 H3BQ85 93 aa3.84□□□□□ -1.79
PDLIM1-204ENST00000492511 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.79
PDLIM1-204ENST00000492511 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
PDLIM1-204ENST00000492511 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.79
PDLIM1-204ENST00000492511 NAA38Q9BRA0 125 aaKnown RBP3.84□□□□□ -1.79
PDLIM1-204ENST00000492511 M0R143 59 aa3.83□□□□□ -1.8
PDLIM1-204ENST00000492511 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
PDLIM1-204ENST00000492511 ANKRD29Q8N6D5 301 aa3.83□□□□□ -1.8
PDLIM1-204ENST00000492511 TRBV7-4A0A0J9YYF1 115 aa3.82□□□□□ -1.8
PDLIM1-204ENST00000492511 BAALC-AS2P0C853 105 aa3.82□□□□□ -1.8
PDLIM1-204ENST00000492511 OBSCN-AS1Q96MR7 158 aa3.82□□□□□ -1.8
PDLIM1-204ENST00000492511 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
PDLIM1-204ENST00000492511 SS18L2Q9UHA2 77 aa3.82□□□□□ -1.8
PDLIM1-204ENST00000492511 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
PDLIM1-204ENST00000492511 TSTD3H0UI37 97 aa3.81□□□□□ -1.8
PDLIM1-204ENST00000492511 CCKP06307 115 aa3.8□□□□□ -1.8
PDLIM1-204ENST00000492511 Q75L30 129 aa3.8□□□□□ -1.8
PDLIM1-204ENST00000492511 LINC00472Q9H8W2 130 aa3.8□□□□□ -1.8
PDLIM1-204ENST00000492511 RBM3P98179 157 aaKnown RBP3.79□□□□□ -1.8
PDLIM1-204ENST00000492511 ATXN8Q156A1 80 aa3.79□□□□□ -1.8
PDLIM1-204ENST00000492511 BATFQ16520 125 aa3.79□□□□□ -1.8
PDLIM1-204ENST00000492511 TAX1BP3O14907 124 aa3.78□□□□□ -1.8
PDLIM1-204ENST00000492511 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
PDLIM1-204ENST00000492511 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 A8MUU9 505 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 IGKV4-1P06312 121 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 SMCPP49901 116 aaPredicted RBP3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 DSCR10P59022 87 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 C20orf166-AS1Q96NR2 134 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 DSCR8Q96T75 97 aa3.77□□□□□ -1.81
PDLIM1-204ENST00000492511 C9orf118A6NHY6 69 aa3.76□□□□□ -1.81
PDLIM1-204ENST00000492511 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
PDLIM1-204ENST00000492511 Q6ZQT0 140 aa3.76□□□□□ -1.81
PDLIM1-204ENST00000492511 VPS25Q9BRG1 176 aa3.76□□□□□ -1.81
PDLIM1-204ENST00000492511 TRBV20-1A0A075B6N2 111 aa3.75□□□□□ -1.81
PDLIM1-204ENST00000492511 C9JAW5 83 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 300.7 ms