RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 NIPBLQ6KC79 2804 aaeCLIP4.12□□□□□ -1.75
CCDC6-202ENST00000491922 CENPEQ02224 2701 aa4.12□□□□□ -1.75
CCDC6-202ENST00000491922 SPART-AS1P0CW21 52 aa4.12□□□□□ -1.75
CCDC6-202ENST00000491922 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
CCDC6-202ENST00000491922 LINC00476Q8WZB0 136 aa4.12□□□□□ -1.75
CCDC6-202ENST00000491922 FN1P02751 2386 aaKnown RBP4.11□□□□□ -1.75
CCDC6-202ENST00000491922 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
CCDC6-202ENST00000491922 IGLV5-37A0A075B6J1 123 aa4.11□□□□□ -1.75
CCDC6-202ENST00000491922 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
CCDC6-202ENST00000491922 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
CCDC6-202ENST00000491922 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 RPL37AP8A6NKH3 93 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 MOBPQ13875 183 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 Q8NAQ8 132 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 MDFIQ99750 246 aa4.1□□□□□ -1.75
CCDC6-202ENST00000491922 IGFL1Q6UW32 110 aa4.09□□□□□ -1.75
CCDC6-202ENST00000491922 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
CCDC6-202ENST00000491922 NBEAL2Q6ZNJ1 2754 aa4.09□□□□□ -1.75
CCDC6-202ENST00000491922 DEFB113Q30KQ7 82 aa4.08□□□□□ -1.76
CCDC6-202ENST00000491922 IGLV8-61A0A075B6I0 122 aa4.08□□□□□ -1.76
CCDC6-202ENST00000491922 A0A087WSZ3 146 aa4.08□□□□□ -1.76
CCDC6-202ENST00000491922 RPL37AP61513 92 aaKnown RBP4.08□□□□□ -1.76
CCDC6-202ENST00000491922 CNBPP62633 177 aaKnown RBP4.08□□□□□ -1.76
CCDC6-202ENST00000491922 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
CCDC6-202ENST00000491922 A8MWP4 228 aa4.07□□□□□ -1.76
CCDC6-202ENST00000491922 H3BNG1 76 aa4.07□□□□□ -1.76
CCDC6-202ENST00000491922 FAM168BA1KXE4 195 aa4.06□□□□□ -1.76
CCDC6-202ENST00000491922 LORP23490 312 aaPredicted RBP4.06□□□□□ -1.76
CCDC6-202ENST00000491922 REG3GQ6UW15 175 aa4.06□□□□□ -1.76
CCDC6-202ENST00000491922 A0A0G2JQZ4 141 aa4.05□□□□□ -1.76
CCDC6-202ENST00000491922 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
CCDC6-202ENST00000491922 SPAG11AQ6PDA7 123 aa4.05□□□□□ -1.76
CCDC6-202ENST00000491922 CUBNO60494 3623 aa4.05□□□□□ -1.76
CCDC6-202ENST00000491922 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
CCDC6-202ENST00000491922 CCDC168Q8NDH2 2452 aa4.05□□□□□ -1.76
CCDC6-202ENST00000491922 LINC01556Q5JQF7 62 aa4.04□□□□□ -1.76
CCDC6-202ENST00000491922 SPINK7P58062 85 aa4.04□□□□□ -1.76
CCDC6-202ENST00000491922 LINC00313P59037 77 aa4.04□□□□□ -1.76
CCDC6-202ENST00000491922 KRTAP10-9P60411 292 aa4.04□□□□□ -1.76
CCDC6-202ENST00000491922 KRTAP1-3Q8IUG1 177 aa4.04□□□□□ -1.76
CCDC6-202ENST00000491922 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
CCDC6-202ENST00000491922 KRTAP7-1Q8IUC3 87 aa4.03□□□□□ -1.76
CCDC6-202ENST00000491922 LINC00472Q9H8W2 130 aa4.03□□□□□ -1.76
CCDC6-202ENST00000491922 TP53AIP1Q9HCN2 124 aa4.03□□□□□ -1.76
CCDC6-202ENST00000491922 MMP24-AS1A0A0U1RRL7 71 aa4.02□□□□□ -1.77
CCDC6-202ENST00000491922 PCOTHQ58A44 107 aa4.02□□□□□ -1.77
CCDC6-202ENST00000491922 H0Y9J4 135 aa4.01□□□□□ -1.77
CCDC6-202ENST00000491922 NBEAL1Q6ZS30 2694 aa4.01□□□□□ -1.77
CCDC6-202ENST00000491922 HRES1P13985 223 aa4□□□□□ -1.77
CCDC6-202ENST00000491922 KRTAP10-3P60369 221 aa4□□□□□ -1.77
CCDC6-202ENST00000491922 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
CCDC6-202ENST00000491922 Q6ZR54 194 aa4□□□□□ -1.77
CCDC6-202ENST00000491922 SONP18583 2426 aaKnown RBP4□□□□□ -1.77
CCDC6-202ENST00000491922 ATRQ13535 2644 aa3.99□□□□□ -1.77
CCDC6-202ENST00000491922 STAB1Q9NY15 2570 aa3.99□□□□□ -1.77
CCDC6-202ENST00000491922 DEFB131BA0A096LNP1 70 aa3.99□□□□□ -1.77
CCDC6-202ENST00000491922 IGKV2-24A0A0C4DH68 120 aa3.98□□□□□ -1.77
CCDC6-202ENST00000491922 PLA2G1BP04054 148 aaKnown RBP3.98□□□□□ -1.77
CCDC6-202ENST00000491922 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
CCDC6-202ENST00000491922 SPRR1BP22528 89 aa3.98□□□□□ -1.77
CCDC6-202ENST00000491922 PRLHP81277 87 aa3.98□□□□□ -1.77
CCDC6-202ENST00000491922 A0A087X002 238 aa3.98□□□□□ -1.77
CCDC6-202ENST00000491922 HIVEP2P31629 2446 aa3.97□□□□□ -1.77
CCDC6-202ENST00000491922 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
CCDC6-202ENST00000491922 COL6A5A8TX70 2615 aa3.97□□□□□ -1.77
CCDC6-202ENST00000491922 KRTAP1-1Q07627 177 aa3.96□□□□□ -1.77
CCDC6-202ENST00000491922 ANK3Q12955 4377 aaKnown RBP3.96□□□□□ -1.78
CCDC6-202ENST00000491922 NSD1Q96L73 2696 aaPredicted RBP3.95□□□□□ -1.78
CCDC6-202ENST00000491922 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
CCDC6-202ENST00000491922 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
CCDC6-202ENST00000491922 FLNAP21333 2647 aaKnown RBP3.94□□□□□ -1.78
CCDC6-202ENST00000491922 ACANP16112 2415 aa3.94□□□□□ -1.78
CCDC6-202ENST00000491922 ANK2Q01484 3957 aa3.94□□□□□ -1.78
CCDC6-202ENST00000491922 ZNF469Q96JG9 3925 aaPredicted RBP3.93□□□□□ -1.78
CCDC6-202ENST00000491922 Q96NJ1 140 aa3.92□□□□□ -1.78
CCDC6-202ENST00000491922 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
CCDC6-202ENST00000491922 RTL8CO15255 209 aa3.92□□□□□ -1.78
CCDC6-202ENST00000491922 ADM2Q7Z4H4 148 aa3.92□□□□□ -1.78
CCDC6-202ENST00000491922 A0A096LNI7 61 aa3.91□□□□□ -1.78
CCDC6-202ENST00000491922 ACYP2P14621 99 aa3.91□□□□□ -1.78
CCDC6-202ENST00000491922 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
CCDC6-202ENST00000491922 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
CCDC6-202ENST00000491922 VWFP04275 2813 aa3.91□□□□□ -1.78
CCDC6-202ENST00000491922 A0A1B0GVX0 72 aa3.91□□□□□ -1.78
CCDC6-202ENST00000491922 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
CCDC6-202ENST00000491922 SMR3AQ99954 134 aa3.91□□□□□ -1.78
CCDC6-202ENST00000491922 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.79
CCDC6-202ENST00000491922 CDK2AP2O75956 126 aa3.9□□□□□ -1.79
CCDC6-202ENST00000491922 RETNLBQ9BQ08 111 aa3.9□□□□□ -1.79
CCDC6-202ENST00000491922 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CCDC6-202ENST00000491922 A0A1B0GU69 56 aa3.89□□□□□ -1.79
CCDC6-202ENST00000491922 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
CCDC6-202ENST00000491922 ALMS1Q8TCU4 4167 aa3.87□□□□□ -1.79
CCDC6-202ENST00000491922 MIR22HGQ0VDD5 57 aa3.87□□□□□ -1.79
CCDC6-202ENST00000491922 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
CCDC6-202ENST00000491922 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
CCDC6-202ENST00000491922 UQCR11O14957 56 aa3.86□□□□□ -1.79
CCDC6-202ENST00000491922 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms