RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
LSM2-213ENST00000491421 DEFB105AQ8NG35 78 aa4.59□□□□□ -1.67
LSM2-213ENST00000491421 LIMD2Q9BT23 127 aa4.59□□□□□ -1.67
LSM2-213ENST00000491421 TRBV7-6A0A0J9YX20 115 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 FAM240AA0A1B0GVK7 77 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 Q1RN00 199 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 Q6ZVH6 145 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 PCP2Q8IVA1 136 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
LSM2-213ENST00000491421 TEX49A0A1B0GTD5 131 aa4.57□□□□□ -1.68
LSM2-213ENST00000491421 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
LSM2-213ENST00000491421 C1orf195Q5TG92 126 aa4.57□□□□□ -1.68
LSM2-213ENST00000491421 MUSTN1Q8IVN3 82 aa4.57□□□□□ -1.68
LSM2-213ENST00000491421 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
LSM2-213ENST00000491421 A0A1B0GV90 55 aa4.56□□□□□ -1.68
LSM2-213ENST00000491421 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
LSM2-213ENST00000491421 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
LSM2-213ENST00000491421 PRO1933Q9H354 126 aa4.56□□□□□ -1.68
LSM2-213ENST00000491421 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
LSM2-213ENST00000491421 C12orf57Q99622 126 aa4.55□□□□□ -1.68
LSM2-213ENST00000491421 IGLV5-48A0A075B6I7 105 aa4.54□□□□□ -1.68
LSM2-213ENST00000491421 H7C2G1 150 aa4.54□□□□□ -1.68
LSM2-213ENST00000491421 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
LSM2-213ENST00000491421 NHP2Q9NX24 153 aaKnown RBP4.54□□□□□ -1.68
LSM2-213ENST00000491421 C9orf92A6NGG3 77 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 S100A2P29034 98 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 SMIM29Q86T20 159 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 HIST3H2BBQ8N257 126 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 SMIM11BQ8TCY0 68 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 HIST1H2BLQ99880 126 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 VPS25Q9BRG1 176 aa4.53□□□□□ -1.68
LSM2-213ENST00000491421 A0A0G2JQZ4 141 aa4.51□□□□□ -1.69
LSM2-213ENST00000491421 Q5XG85 94 aa4.51□□□□□ -1.69
LSM2-213ENST00000491421 F8WEM9 126 aa4.5□□□□□ -1.69
LSM2-213ENST00000491421 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
LSM2-213ENST00000491421 DLEU1O43261 78 aa4.49□□□□□ -1.69
LSM2-213ENST00000491421 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
LSM2-213ENST00000491421 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
LSM2-213ENST00000491421 hADV29S1A0JD25 119 aa4.48□□□□□ -1.69
LSM2-213ENST00000491421 TCL1BO95988 128 aa4.48□□□□□ -1.69
LSM2-213ENST00000491421 SS18L2Q9UHA2 77 aa4.48□□□□□ -1.69
LSM2-213ENST00000491421 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
LSM2-213ENST00000491421 SMIM6P0DI80 62 aa4.47□□□□□ -1.69
LSM2-213ENST00000491421 Q6ZQY7 126 aa4.47□□□□□ -1.69
LSM2-213ENST00000491421 HIST1H4GQ99525 98 aa4.47□□□□□ -1.69
LSM2-213ENST00000491421 BATFQ16520 125 aa4.46□□□□□ -1.7
LSM2-213ENST00000491421 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
LSM2-213ENST00000491421 Q6JHZ5 121 aa4.45□□□□□ -1.7
LSM2-213ENST00000491421 CLEC2BQ92478 149 aa4.45□□□□□ -1.7
LSM2-213ENST00000491421 COX8AP10176 69 aa4.44□□□□□ -1.7
LSM2-213ENST00000491421 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
LSM2-213ENST00000491421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
LSM2-213ENST00000491421 FAM218AQ96MZ4 157 aa4.44□□□□□ -1.7
LSM2-213ENST00000491421 TRBV7-7A0A0K0K1E9 115 aa4.43□□□□□ -1.7
LSM2-213ENST00000491421 RPL37P61927 97 aaKnown RBP4.43□□□□□ -1.7
LSM2-213ENST00000491421 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
LSM2-213ENST00000491421 OCIAD2Q56VL3 154 aa4.43□□□□□ -1.7
LSM2-213ENST00000491421 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
LSM2-213ENST00000491421 PPDPFLQ8WWR9 84 aa4.43□□□□□ -1.7
LSM2-213ENST00000491421 SNHG12Q9BXW3 62 aa4.43□□□□□ -1.7
LSM2-213ENST00000491421 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
LSM2-213ENST00000491421 PSMB2P49721 201 aa4.41□□□□□ -1.7
LSM2-213ENST00000491421 MT1HP80294 61 aa4.41□□□□□ -1.7
LSM2-213ENST00000491421 RAB37Q96AX2 223 aa4.41□□□□□ -1.7
LSM2-213ENST00000491421 C14orf144Q96I85 54 aa4.41□□□□□ -1.7
LSM2-213ENST00000491421 H3BUT2 72 aa4.4□□□□□ -1.71
LSM2-213ENST00000491421 SNCGO76070 127 aa4.4□□□□□ -1.71
LSM2-213ENST00000491421 CFC1BP0CG36 223 aa4.4□□□□□ -1.71
LSM2-213ENST00000491421 CFC1P0CG37 223 aa4.4□□□□□ -1.71
LSM2-213ENST00000491421 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
LSM2-213ENST00000491421 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
LSM2-213ENST00000491421 K7ERU9 68 aa4.39□□□□□ -1.71
LSM2-213ENST00000491421 SPATA45Q537H7 98 aa4.39□□□□□ -1.71
LSM2-213ENST00000491421 HIGD1BQ9P298 99 aa4.39□□□□□ -1.71
LSM2-213ENST00000491421 A0A0B4J2C4 111 aa4.38□□□□□ -1.71
LSM2-213ENST00000491421 H0YGX0 51 aa4.38□□□□□ -1.71
LSM2-213ENST00000491421 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
LSM2-213ENST00000491421 OBSCN-AS1Q96MR7 158 aa4.38□□□□□ -1.71
LSM2-213ENST00000491421 VAMP8Q9BV40 100 aa4.38□□□□□ -1.71
LSM2-213ENST00000491421 LST1O00453 97 aa4.37□□□□□ -1.71
LSM2-213ENST00000491421 NDUFS5O43920 106 aa4.37□□□□□ -1.71
LSM2-213ENST00000491421 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
LSM2-213ENST00000491421 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
LSM2-213ENST00000491421 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
LSM2-213ENST00000491421 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
LSM2-213ENST00000491421 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
LSM2-213ENST00000491421 FAM236DA0A1B0GTK5 79 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 M0R2T5 61 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 FAM236CP0DP71 79 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 Q6Q795 121 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 CEND1Q8N111 149 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 PRO1854Q9UHT4 67 aa4.35□□□□□ -1.71
LSM2-213ENST00000491421 J3KT08 172 aa4.34□□□□□ -1.71
LSM2-213ENST00000491421 FABP2P12104 132 aa4.34□□□□□ -1.71
LSM2-213ENST00000491421 TEN1Q86WV5 123 aa4.34□□□□□ -1.71
LSM2-213ENST00000491421 A0A087WSZ3 146 aa4.33□□□□□ -1.72
LSM2-213ENST00000491421 A0A1B0GX51 115 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms