RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 K7EP13 123 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 GNG7O60262 68 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 NMBP08949 121 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 MINOS1Q5TGZ0 78 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 C12orf73Q69YU5 71 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 C1orf54Q8WWF1 131 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 AGPAT4-IT1Q9H0P7 198 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 RERGLQ9H628 205 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 KAAG1Q9UBP8 84 aa0.85□□□□□ -2.27
PTPRC-212ENST00000491302 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
PTPRC-212ENST00000491302 SMIM6P0DI80 62 aa0.84□□□□□ -2.27
PTPRC-212ENST00000491302 GCHFRP30047 84 aa0.84□□□□□ -2.27
PTPRC-212ENST00000491302 TPPP2P59282 170 aa0.84□□□□□ -2.27
PTPRC-212ENST00000491302 LINC00312Q9Y6C7 94 aa0.84□□□□□ -2.27
PTPRC-212ENST00000491302 COX6A2Q02221 97 aa0.83□□□□□ -2.28
PTPRC-212ENST00000491302 LOC285095A0A1B0GVY8 99 aa0.82□□□□□ -2.28
PTPRC-212ENST00000491302 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
PTPRC-212ENST00000491302 TDRG1Q3Y452 100 aa0.82□□□□□ -2.28
PTPRC-212ENST00000491302 SERP1Q9Y6X1 66 aa0.81□□□□□ -2.28
PTPRC-212ENST00000491302 SIX6O95475 246 aa0.8□□□□□ -2.28
PTPRC-212ENST00000491302 GAFA1Q96PS6 74 aa0.8□□□□□ -2.28
PTPRC-212ENST00000491302 NAA60Q9H7X0 242 aa0.8□□□□□ -2.28
PTPRC-212ENST00000491302 TRAV1-2A0A0B4J238 106 aa0.79□□□□□ -2.28
PTPRC-212ENST00000491302 DEFB130BP0DP73 79 aa0.79□□□□□ -2.28
PTPRC-212ENST00000491302 DEFB130AP0DP74 79 aa0.79□□□□□ -2.28
PTPRC-212ENST00000491302 DEFA5Q01523 94 aa0.79□□□□□ -2.28
PTPRC-212ENST00000491302 Q6AWC8 147 aa0.79□□□□□ -2.28
PTPRC-212ENST00000491302 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
PTPRC-212ENST00000491302 APELAP0DMC3 54 aa0.78□□□□□ -2.28
PTPRC-212ENST00000491302 MEIG1Q5JSS6 88 aa0.78□□□□□ -2.28
PTPRC-212ENST00000491302 Q5VV11 94 aa0.78□□□□□ -2.28
PTPRC-212ENST00000491302 NCBP2-AS2Q69YL0 99 aa0.78□□□□□ -2.28
PTPRC-212ENST00000491302 TRAV13-2A0A0B4J235 113 aa0.77□□□□□ -2.29
PTPRC-212ENST00000491302 SARNPP82979 210 aaKnown RBP0.77□□□□□ -2.29
PTPRC-212ENST00000491302 BAGE3Q86Y29 109 aa0.77□□□□□ -2.29
PTPRC-212ENST00000491302 WFDC10BQ8IUB3 73 aa0.77□□□□□ -2.29
PTPRC-212ENST00000491302 OOSP1A8MZH6 123 aa0.76□□□□□ -2.29
PTPRC-212ENST00000491302 HCG22E2RYF7 251 aa0.76□□□□□ -2.29
PTPRC-212ENST00000491302 AQP10Q96PS8 301 aa0.76□□□□□ -2.29
PTPRC-212ENST00000491302 A0A096LPF7 62 aa0.75□□□□□ -2.29
PTPRC-212ENST00000491302 IQCF6A8MYZ5 107 aa0.75□□□□□ -2.29
PTPRC-212ENST00000491302 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.75□□□□□ -2.29
PTPRC-212ENST00000491302 LSM10Q969L4 123 aaKnown RBP0.75□□□□□ -2.29
PTPRC-212ENST00000491302 DEFB131AP59861 70 aa0.74□□□□□ -2.29
PTPRC-212ENST00000491302 RPS27LQ71UM5 84 aaKnown RBP0.74□□□□□ -2.29
PTPRC-212ENST00000491302 Q8N8P6 123 aa0.74□□□□□ -2.29
PTPRC-212ENST00000491302 FGF7P21781 194 aa0.73□□□□□ -2.29
PTPRC-212ENST00000491302 UBE2D4Q9Y2X8 147 aa0.72□□□□□ -2.29
PTPRC-212ENST00000491302 PVALEFA0A1B0GWK0 134 aa0.71□□□□□ -2.3
PTPRC-212ENST00000491302 H3BNG1 76 aa0.71□□□□□ -2.3
PTPRC-212ENST00000491302 USMG5Q96IX5 58 aa0.71□□□□□ -2.3
PTPRC-212ENST00000491302 C20orf202A1L168 122 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 H3BUA1 57 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 MT1BP07438 61 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 PLGLAQ15195 96 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 Q56UQ5 140 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 LEAP2Q969E1 77 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 TTTY10Q9BZA0 68 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 R4GMQ9 66 aa0.7□□□□□ -2.3
PTPRC-212ENST00000491302 EFCAB10A6NFE3 127 aa0.69□□□□□ -2.3
PTPRC-212ENST00000491302 Q5BKY6 102 aa0.69□□□□□ -2.3
PTPRC-212ENST00000491302 LINC01556Q5JQF7 62 aa0.69□□□□□ -2.3
PTPRC-212ENST00000491302 PPP1R17O96001 155 aa0.68□□□□□ -2.3
PTPRC-212ENST00000491302 C10orf128Q5T292 105 aa0.68□□□□□ -2.3
PTPRC-212ENST00000491302 HEPN1Q6WQI6 88 aa0.68□□□□□ -2.3
PTPRC-212ENST00000491302 RPL13AP3Q6NVV1 102 aa0.67□□□□□ -2.3
PTPRC-212ENST00000491302 PPP3R2Q96LZ3 170 aa0.67□□□□□ -2.3
PTPRC-212ENST00000491302 FAM223BA6NKX1 122 aa0.66□□□□□ -2.3
PTPRC-212ENST00000491302 FAM223AQ8IWN6 122 aa0.66□□□□□ -2.3
PTPRC-212ENST00000491302 RABAC1Q9UI14 185 aa0.66□□□□□ -2.3
PTPRC-212ENST00000491302 SPINK1P00995 79 aa0.65□□□□□ -2.31
PTPRC-212ENST00000491302 COMMD6Q7Z4G1 85 aa0.65□□□□□ -2.31
PTPRC-212ENST00000491302 FAM213BQ8TBF2 198 aa0.65□□□□□ -2.31
PTPRC-212ENST00000491302 NOP10Q9NPE3 64 aaKnown RBP0.65□□□□□ -2.31
PTPRC-212ENST00000491302 LENEPQ9Y5L5 61 aa0.65□□□□□ -2.31
PTPRC-212ENST00000491302 MIF4GDA9UHW6 222 aaKnown RBP0.64□□□□□ -2.31
PTPRC-212ENST00000491302 NDUFA3O95167 84 aa0.64□□□□□ -2.31
PTPRC-212ENST00000491302 HTN1P15515 57 aa0.64□□□□□ -2.31
PTPRC-212ENST00000491302 CFAP126Q5VTH2 177 aa0.64□□□□□ -2.31
PTPRC-212ENST00000491302 TTC9CQ8N5M4 171 aa0.64□□□□□ -2.31
PTPRC-212ENST00000491302 RHPN1-AS1Q9BWJ2 59 aa0.64□□□□□ -2.31
PTPRC-212ENST00000491302 TIMM8BQ9Y5J9 83 aaPredicted RBP0.64□□□□□ -2.31
PTPRC-212ENST00000491302 FXYD6-FXYD2A0A087WZ82 144 aa0.63□□□□□ -2.31
PTPRC-212ENST00000491302 C9orf92A6NGG3 77 aa0.63□□□□□ -2.31
PTPRC-212ENST00000491302 APOC2P02655 101 aa0.63□□□□□ -2.31
PTPRC-212ENST00000491302 UBE2D3P61077 147 aa0.63□□□□□ -2.31
PTPRC-212ENST00000491302 PSMG4Q5JS54 123 aa0.63□□□□□ -2.31
PTPRC-212ENST00000491302 HMGN2P05204 90 aaKnown RBP0.62□□□□□ -2.31
PTPRC-212ENST00000491302 A0A096LNI7 61 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 LOC100130705A0A1B0GUX0 176 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 ZNF815PA8K554 130 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 NDUFA4O00483 81 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 AKAIN1P0CW23 69 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 SSBP3-AS1Q7Z2R9 100 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 DPY30Q9C005 99 aa0.61□□□□□ -2.31
PTPRC-212ENST00000491302 IFI6P09912 130 aa0.6□□□□□ -2.31
PTPRC-212ENST00000491302 DEFB1P60022 68 aa0.6□□□□□ -2.31
PTPRC-212ENST00000491302 C8orf59Q8N0T1 100 aaPredicted RBP0.6□□□□□ -2.31
PTPRC-212ENST00000491302 PRO0255Q9UI72 69 aa0.6□□□□□ -2.31
PTPRC-212ENST00000491302 SPINK8P0C7L1 97 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms