RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 PEG3Q9GZU2 1588 aa-1.21□□□□□ -2.6
SEMA3A-207ENST00000490883 H0YGG7 62 aa-1.21□□□□□ -2.6
SEMA3A-207ENST00000490883 K7EP34 96 aa-1.21□□□□□ -2.6
SEMA3A-207ENST00000490883 DEFB1P60022 68 aa-1.21□□□□□ -2.6
SEMA3A-207ENST00000490883 CLTCQ00610 1675 aaKnown RBP-1.21□□□□□ -2.6
SEMA3A-207ENST00000490883 EPRSP07814 1512 aaKnown RBP-1.21□□□□□ -2.6
SEMA3A-207ENST00000490883 ANKRD50Q9ULJ7 1429 aa-1.22□□□□□ -2.6
SEMA3A-207ENST00000490883 SRCAPQ6ZRS2 3230 aa-1.22□□□□□ -2.6
SEMA3A-207ENST00000490883 MAGI2Q86UL8 1455 aa-1.22□□□□□ -2.6
SEMA3A-207ENST00000490883 MAP3K1Q13233 1512 aa-1.22□□□□□ -2.6
SEMA3A-207ENST00000490883 QSER1Q2KHR3 1735 aa-1.23□□□□□ -2.61
SEMA3A-207ENST00000490883 MT1EP04732 61 aa-1.23□□□□□ -2.61
SEMA3A-207ENST00000490883 NMSQ5H8A3 153 aa-1.23□□□□□ -2.61
SEMA3A-207ENST00000490883 PKD1L3Q7Z443 1732 aa-1.23□□□□□ -2.61
SEMA3A-207ENST00000490883 LRBAP50851 2863 aa-1.24□□□□□ -2.61
SEMA3A-207ENST00000490883 SPTBN5Q9NRC6 3674 aaKnown RBP-1.24□□□□□ -2.61
SEMA3A-207ENST00000490883 KRTAP20-1Q3LI63 56 aa-1.24□□□□□ -2.61
SEMA3A-207ENST00000490883 M0R143 59 aa-1.25□□□□□ -2.61
SEMA3A-207ENST00000490883 COX7BP24311 80 aa-1.25□□□□□ -2.61
SEMA3A-207ENST00000490883 TLN1Q9Y490 2541 aaKnown RBP-1.25□□□□□ -2.61
SEMA3A-207ENST00000490883 FANCAO15360 1455 aa-1.25□□□□□ -2.61
SEMA3A-207ENST00000490883 MT1LQ93083 61 aa-1.26□□□□□ -2.61
SEMA3A-207ENST00000490883 COX6B2Q6YFQ2 88 aa-1.27□□□□□ -2.61
SEMA3A-207ENST00000490883 SPTAN1Q13813 2472 aaKnown RBP-1.28□□□□□ -2.61
SEMA3A-207ENST00000490883 ATP10BO94823 1461 aa-1.28□□□□□ -2.61
SEMA3A-207ENST00000490883 MT1MQ8N339 61 aa-1.28□□□□□ -2.61
SEMA3A-207ENST00000490883 CSMD2Q7Z408 3487 aa-1.28□□□□□ -2.61
SEMA3A-207ENST00000490883 MT1BP07438 61 aa-1.29□□□□□ -2.62
SEMA3A-207ENST00000490883 DMXL2Q8TDJ6 3036 aa-1.29□□□□□ -2.62
SEMA3A-207ENST00000490883 PREX1Q8TCU6 1659 aa-1.29□□□□□ -2.62
SEMA3A-207ENST00000490883 MT2AP02795 61 aa-1.3□□□□□ -2.62
SEMA3A-207ENST00000490883 HMGN2P05204 90 aaKnown RBP-1.3□□□□□ -2.62
SEMA3A-207ENST00000490883 RGPD8O14715 1765 aaPredicted RBP-1.3□□□□□ -2.62
SEMA3A-207ENST00000490883 RGPD5Q99666 1765 aa-1.3□□□□□ -2.62
SEMA3A-207ENST00000490883 ALKQ9UM73 1620 aa-1.3□□□□□ -2.62
SEMA3A-207ENST00000490883 ABCC10Q5T3U5 1492 aa-1.31□□□□□ -2.62
SEMA3A-207ENST00000490883 ITPR2Q14571 2701 aa-1.31□□□□□ -2.62
SEMA3A-207ENST00000490883 SMR3BP02814 79 aaPredicted RBP-1.31□□□□□ -2.62
SEMA3A-207ENST00000490883 S4R3F8 94 aa-1.31□□□□□ -2.62
SEMA3A-207ENST00000490883 VPS8Q8N3P4 1428 aa-1.32□□□□□ -2.62
SEMA3A-207ENST00000490883 BPTFQ12830 3046 aa-1.32□□□□□ -2.62
SEMA3A-207ENST00000490883 NDUFA3O95167 84 aa-1.32□□□□□ -2.62
SEMA3A-207ENST00000490883 RGPD1P0DJD0 1748 aa-1.32□□□□□ -2.62
SEMA3A-207ENST00000490883 ANKRD26Q9UPS8 1709 aa-1.32□□□□□ -2.62
SEMA3A-207ENST00000490883 A0A1B0GUT8 65 aa-1.33□□□□□ -2.62
SEMA3A-207ENST00000490883 GYPAP02724 150 aa-1.33□□□□□ -2.62
SEMA3A-207ENST00000490883 DEFB110Q30KQ9 67 aa-1.33□□□□□ -2.62
SEMA3A-207ENST00000490883 C20orf78Q9BR46 151 aa-1.33□□□□□ -2.62
SEMA3A-207ENST00000490883 SNHG12Q9BXW3 62 aa-1.33□□□□□ -2.62
SEMA3A-207ENST00000490883 ATP7BP35670 1465 aa-1.34□□□□□ -2.62
SEMA3A-207ENST00000490883 MT1GP13640 62 aa-1.34□□□□□ -2.62
SEMA3A-207ENST00000490883 SMIM11AP58511 58 aa-1.34□□□□□ -2.62
SEMA3A-207ENST00000490883 PLGLAQ15195 96 aa-1.34□□□□□ -2.62
SEMA3A-207ENST00000490883 LRRC7Q96NW7 1537 aa-1.35□□□□□ -2.62
SEMA3A-207ENST00000490883 LRRC9Q6ZRR7 1453 aa-1.35□□□□□ -2.63
SEMA3A-207ENST00000490883 RPL38P63173 70 aaKnown RBP-1.35□□□□□ -2.63
SEMA3A-207ENST00000490883 KRTAP8-1Q8IUC2 63 aa-1.35□□□□□ -2.63
SEMA3A-207ENST00000490883 GAFA1Q96PS6 74 aa-1.35□□□□□ -2.63
SEMA3A-207ENST00000490883 IQCF6A8MYZ5 107 aa-1.36□□□□□ -2.63
SEMA3A-207ENST00000490883 NEXMIFQ5QGS0 1516 aa-1.36□□□□□ -2.63
SEMA3A-207ENST00000490883 ADGRG4Q8IZF6 3080 aa-1.36□□□□□ -2.63
SEMA3A-207ENST00000490883 CDC42BPAQ5VT25 1732 aa-1.37□□□□□ -2.63
SEMA3A-207ENST00000490883 UBR1Q8IWV7 1749 aa-1.37□□□□□ -2.63
SEMA3A-207ENST00000490883 BOD1L1Q8NFC6 3051 aa-1.37□□□□□ -2.63
SEMA3A-207ENST00000490883 PEA15Q15121 130 aa-1.37□□□□□ -2.63
SEMA3A-207ENST00000490883 C4AP0C0L4 1744 aa-1.37□□□□□ -2.63
SEMA3A-207ENST00000490883 C4BP0C0L5 1744 aa-1.37□□□□□ -2.63
SEMA3A-207ENST00000490883 PLXNC1O60486 1568 aa-1.38□□□□□ -2.63
SEMA3A-207ENST00000490883 ATMQ13315 3056 aa-1.38□□□□□ -2.63
SEMA3A-207ENST00000490883 AKAP12Q02952 1782 aa-1.38□□□□□ -2.63
SEMA3A-207ENST00000490883 PRLHP81277 87 aa-1.38□□□□□ -2.63
SEMA3A-207ENST00000490883 ZFHX4Q86UP3 3567 aa-1.38□□□□□ -2.63
SEMA3A-207ENST00000490883 CDC42BPGQ6DT37 1551 aa-1.38□□□□□ -2.63
SEMA3A-207ENST00000490883 S100A8P05109 93 aa-1.39□□□□□ -2.63
SEMA3A-207ENST00000490883 PKIAP61925 76 aa-1.39□□□□□ -2.63
SEMA3A-207ENST00000490883 CLPSL2Q6UWE3 100 aa-1.39□□□□□ -2.63
SEMA3A-207ENST00000490883 MGAQ8IWI9 3026 aa-1.39□□□□□ -2.63
SEMA3A-207ENST00000490883 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.39□□□□□ -2.63
SEMA3A-207ENST00000490883 MYO3AQ8NEV4 1616 aa-1.4□□□□□ -2.63
SEMA3A-207ENST00000490883 CYB5AP00167 134 aa-1.41□□□□□ -2.64
SEMA3A-207ENST00000490883 SUPT6HQ7KZ85 1726 aaKnown RBP-1.41□□□□□ -2.64
SEMA3A-207ENST00000490883 CEP162Q5TB80 1403 aa-1.41□□□□□ -2.64
SEMA3A-207ENST00000490883 MYO15AQ9UKN7 3530 aa-1.42□□□□□ -2.64
SEMA3A-207ENST00000490883 TIAM2Q8IVF5 1701 aa-1.42□□□□□ -2.64
SEMA3A-207ENST00000490883 TRAV21A0A0B4J279 112 aa-1.42□□□□□ -2.64
SEMA3A-207ENST00000490883 FREM2Q5SZK8 3169 aa-1.42□□□□□ -2.64
SEMA3A-207ENST00000490883 WIZO95785 1651 aa-1.42□□□□□ -2.64
SEMA3A-207ENST00000490883 RGPD4Q7Z3J3 1758 aa-1.43□□□□□ -2.64
SEMA3A-207ENST00000490883 PRUNE2Q8WUY3 3088 aa-1.43□□□□□ -2.64
SEMA3A-207ENST00000490883 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.43□□□□□ -2.64
SEMA3A-207ENST00000490883 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.43□□□□□ -2.64
SEMA3A-207ENST00000490883 MYMXA0A1B0GTQ4 84 aa-1.45□□□□□ -2.64
SEMA3A-207ENST00000490883 PYY3Q5JQD4 70 aa-1.45□□□□□ -2.64
SEMA3A-207ENST00000490883 DEPDC5O75140 1603 aa-1.45□□□□□ -2.64
SEMA3A-207ENST00000490883 RGPD3A6NKT7 1758 aaPredicted RBP-1.46□□□□□ -2.64
SEMA3A-207ENST00000490883 TNP1P09430 55 aa-1.46□□□□□ -2.64
SEMA3A-207ENST00000490883 POLR1AO95602 1720 aaPredicted RBP-1.46□□□□□ -2.64
SEMA3A-207ENST00000490883 SCN11AQ9UI33 1791 aa-1.47□□□□□ -2.64
SEMA3A-207ENST00000490883 C3orf79P0CE67 100 aa-1.47□□□□□ -2.64
SEMA3A-207ENST00000490883 USP32Q8NFA0 1604 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms