RNA–Protein interactions for RNA: ENST00000490795.1

PRKD1-204, Transcript of protein kinase D1, humanhuman

TSL 2

Gene PRKD1, Length 492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-204ENST00000490795 MUC3AQ02505 3323 aa0.84□□□□□ -2.28
PRKD1-204ENST00000490795 WDFY4Q6ZS81 3184 aa0.84□□□□□ -2.28
PRKD1-204ENST00000490795 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 ZNF462Q96JM2 2506 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 NBASA2RRP1 2371 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 FRYLO94915 3013 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 I3L3M4 83 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 CCL22O00626 93 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 COX6B1P14854 86 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 Q5VSD8 79 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 PTPN13Q12923 2485 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 CENPEQ02224 2701 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 TLN1Q9Y490 2541 aaKnown RBP0.83□□□□□ -2.28
PRKD1-204ENST00000490795 EYSQ5T1H1 3165 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 ITPR1Q14643 2758 aa0.83□□□□□ -2.28
PRKD1-204ENST00000490795 NAV2Q8IVL1 2488 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 LRRK2Q5S007 2527 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 SPTBN1Q01082 2364 aaKnown RBP0.82□□□□□ -2.28
PRKD1-204ENST00000490795 USP34Q70CQ2 3546 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 IGSF10Q6WRI0 2623 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 REV3LO60673 3130 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 NREPQ16612 68 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 DEFB110Q30KQ9 67 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 VPS13AQ96RL7 3174 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 POLQO75417 2590 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 USP9XQ93008 2570 aaPredicted RBP0.82□□□□□ -2.28
PRKD1-204ENST00000490795 HECTD1Q9ULT8 2610 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 USP24Q9UPU5 2620 aa0.82□□□□□ -2.28
PRKD1-204ENST00000490795 GCN1Q92616 2671 aaKnown RBP0.82□□□□□ -2.28
PRKD1-204ENST00000490795 DMXL2Q8TDJ6 3036 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 H3BVH4 76 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 MRPL33O75394 65 aaKnown RBP0.81□□□□□ -2.28
PRKD1-204ENST00000490795 STATHP02808 62 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 SPG11Q96JI7 2443 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 CFAP46Q8IYW2 2715 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 MYO9AB2RTY4 2548 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 AKAP13Q12802 2813 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 USP9YO00507 2555 aaPredicted RBP0.81□□□□□ -2.28
PRKD1-204ENST00000490795 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 MAST4O15021 2626 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 KALRNO60229 2985 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 SETXQ7Z333 2677 aaKnown RBP0.81□□□□□ -2.28
PRKD1-204ENST00000490795 BPTFQ12830 3046 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
PRKD1-204ENST00000490795 FLNCQ14315 2725 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 MEGF8Q7Z7M0 2845 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 MYO15AQ9UKN7 3530 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 LAMA1P25391 3075 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 FXYD6-FXYD2A0A087WZ82 144 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 ATXN8Q156A1 80 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 S100ZQ8WXG8 99 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 CCDC168Q8NDH2 2452 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 DMDP11532 3685 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
PRKD1-204ENST00000490795 MGAQ8IWI9 3026 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 TSC2P49815 1807 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 PCNX1Q96RV3 2341 aa0.8□□□□□ -2.28
PRKD1-204ENST00000490795 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
PRKD1-204ENST00000490795 DOPEY1Q5JWR5 2465 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 NBEAQ8NFP9 2946 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 ZZEF1O43149 2961 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 FRYQ5TBA9 3013 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 PKDREJQ9NTG1 2253 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 DOPEY2Q9Y3R5 2298 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 COX6B2Q6YFQ2 88 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 RPS27LQ71UM5 84 aaKnown RBP0.79□□□□□ -2.28
PRKD1-204ENST00000490795 DNAH14Q0VDD8 3507 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 CFAP47Q6ZTR5 3102 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 ITPR2Q14571 2701 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 TEX15Q9BXT5 2789 aa0.79□□□□□ -2.28
PRKD1-204ENST00000490795 FREM2Q5SZK8 3169 aa0.78□□□□□ -2.28
PRKD1-204ENST00000490795 MTORP42345 2549 aa0.78□□□□□ -2.28
PRKD1-204ENST00000490795 DCHS1Q96JQ0 3298 aa0.78□□□□□ -2.28
PRKD1-204ENST00000490795 UBR5O95071 2799 aaPredicted RBP0.78□□□□□ -2.28
PRKD1-204ENST00000490795 NIPBLQ6KC79 2804 aaeCLIP0.78□□□□□ -2.28
PRKD1-204ENST00000490795 LAMA5O15230 3695 aa0.78□□□□□ -2.28
PRKD1-204ENST00000490795 MRPL34Q9BQ48 92 aaKnown RBP0.78□□□□□ -2.28
PRKD1-204ENST00000490795 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
PRKD1-204ENST00000490795 ABCA2Q9BZC7 2435 aa0.78□□□□□ -2.28
PRKD1-204ENST00000490795 ANKHD1Q8IWZ3 2542 aaKnown RBP0.78□□□□□ -2.28
PRKD1-204ENST00000490795 ITPR3Q14573 2671 aa0.78□□□□□ -2.29
PRKD1-204ENST00000490795 AKAP6Q13023 2319 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.29
PRKD1-204ENST00000490795 CSPG4Q6UVK1 2322 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 C2CD3Q4AC94 2353 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
PRKD1-204ENST00000490795 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 TACC2O95359 2948 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 ASPMQ8IZT6 3477 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 SPRR1AP35321 89 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 TFF3Q07654 80 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 HILPDAQ9Y5L2 63 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 UTP20O75691 2785 aaKnown RBP0.77□□□□□ -2.29
PRKD1-204ENST00000490795 CELSR2Q9HCU4 2923 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 ATMQ13315 3056 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 BOD1L1Q8NFC6 3051 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 CELSR3Q9NYQ7 3312 aa0.77□□□□□ -2.29
PRKD1-204ENST00000490795 WDFY3Q8IZQ1 3526 aa0.76□□□□□ -2.29
PRKD1-204ENST00000490795 APCP25054 2843 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms