RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 TNXBP22105 4242 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 TRANK1O15050 2925 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 KIAA0586Q9BVV6 1533 aa0.09□□□□□ -2.39
NF1-213ENST00000489712 FAT2Q9NYQ8 4349 aa0.09□□□□□ -2.4
NF1-213ENST00000489712 ABCA9Q8IUA7 1624 aa0.09□□□□□ -2.4
NF1-213ENST00000489712 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
NF1-213ENST00000489712 PDE4DIPQ5VU43 2346 aa0.08□□□□□ -2.4
NF1-213ENST00000489712 DEFB130BP0DP73 79 aa0.08□□□□□ -2.4
NF1-213ENST00000489712 DEFB130AP0DP74 79 aa0.08□□□□□ -2.4
NF1-213ENST00000489712 CRIP1P50238 77 aa0.08□□□□□ -2.4
NF1-213ENST00000489712 DEFB114Q30KQ6 69 aa0.08□□□□□ -2.4
NF1-213ENST00000489712 RNF17Q9BXT8 1623 aaKnown RBP0.08□□□□□ -2.4
NF1-213ENST00000489712 FLNBO75369 2602 aaKnown RBP0.08□□□□□ -2.4
NF1-213ENST00000489712 ZC3H13Q5T200 1668 aaKnown RBP0.08□□□□□ -2.4
NF1-213ENST00000489712 EFCAB5A4FU69 1503 aa0.08□□□□□ -2.4
NF1-213ENST00000489712 BSNQ9UPA5 3926 aa0.07□□□□□ -2.4
NF1-213ENST00000489712 INO80Q9ULG1 1556 aaPredicted RBP0.07□□□□□ -2.4
NF1-213ENST00000489712 FLNAP21333 2647 aaKnown RBP0.07□□□□□ -2.4
NF1-213ENST00000489712 LPAP08519 4548 aa0.06□□□□□ -2.4
NF1-213ENST00000489712 ACANP16112 2415 aa0.06□□□□□ -2.4
NF1-213ENST00000489712 MROH1Q8NDA8 1641 aa0.06□□□□□ -2.4
NF1-213ENST00000489712 MACF1Q9UPN3 7388 aaKnown RBP0.06□□□□□ -2.4
NF1-213ENST00000489712 A0A087WWC5 75 aa0.06□□□□□ -2.4
NF1-213ENST00000489712 MINOS1Q5TGZ0 78 aa0.06□□□□□ -2.4
NF1-213ENST00000489712 PCNX1Q96RV3 2341 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 KMT2AQ03164 3969 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 LINC01549A6NIU2 74 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 PRLHP81277 87 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 NCBP2-AS2Q69YL0 99 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 HSPG2P98160 4391 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 DNMBPQ6XZF7 1577 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 C3P01024 1663 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
NF1-213ENST00000489712 NSD1Q96L73 2696 aaPredicted RBP0.04□□□□□ -2.4
NF1-213ENST00000489712 ABCC6O95255 1503 aa0.04□□□□□ -2.4
NF1-213ENST00000489712 SMIM31A0A1B0GVY4 71 aa0.04□□□□□ -2.4
NF1-213ENST00000489712 K7EMI3 77 aa0.04□□□□□ -2.4
NF1-213ENST00000489712 SERF2P84101 59 aa0.04□□□□□ -2.4
NF1-213ENST00000489712 S100ZQ8WXG8 99 aa0.04□□□□□ -2.4
NF1-213ENST00000489712 AKAP13Q12802 2813 aa0.04□□□□□ -2.4
NF1-213ENST00000489712 ALMS1Q8TCU4 4167 aa0.03□□□□□ -2.4
NF1-213ENST00000489712 ZANQ9Y493 2812 aa0.03□□□□□ -2.4
NF1-213ENST00000489712 CCDC180Q9P1Z9 1646 aa0.03□□□□□ -2.4
NF1-213ENST00000489712 C9orf92A6NGG3 77 aa0.03□□□□□ -2.4
NF1-213ENST00000489712 H3BNG1 76 aa0.03□□□□□ -2.4
NF1-213ENST00000489712 DEFB106AQ8N104 65 aa0.03□□□□□ -2.4
NF1-213ENST00000489712 PRKDCP78527 4128 aaKnown RBP0.03□□□□□ -2.4
NF1-213ENST00000489712 MADDQ8WXG6 1647 aa0.02□□□□□ -2.41
NF1-213ENST00000489712 NMES1Q9C002 83 aa0.02□□□□□ -2.41
NF1-213ENST00000489712 C6orf48Q9UBA6 75 aa0.02□□□□□ -2.41
NF1-213ENST00000489712 BPTFQ12830 3046 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 COL6A3P12111 3177 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 FCER1GP30273 86 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 SPRR2AP35326 72 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 WT1-ASQ06250 92 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 SMIM5Q71RC9 77 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 TIMM8BQ9Y5J9 83 aaPredicted RBP0.01□□□□□ -2.41
NF1-213ENST00000489712 ANKRD36CQ5JPF3 1778 aa0.01□□□□□ -2.41
NF1-213ENST00000489712 H3BUA1 57 aa0□□□□□ -2.41
NF1-213ENST00000489712 S4R3F8 94 aa0□□□□□ -2.41
NF1-213ENST00000489712 DSPP15924 2871 aaKnown RBP-0□□□□□ -2.41
NF1-213ENST00000489712 TENM2Q9NT68 2774 aa-0□□□□□ -2.41
NF1-213ENST00000489712 KIF1AQ12756 1690 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 ITSN2Q9NZM3 1697 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 TNRC18O15417 2968 aaPredicted RBP-0.01□□□□□ -2.41
NF1-213ENST00000489712 PRRC2CQ9Y520 2896 aaKnown RBP-0.01□□□□□ -2.41
NF1-213ENST00000489712 HECTD4Q9Y4D8 3996 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 HECTD1Q9ULT8 2610 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 CREBBPQ92793 2442 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 NBASA2RRP1 2371 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 SPTBN4Q9H254 2564 aa-0.01□□□□□ -2.41
NF1-213ENST00000489712 RPS27P42677 84 aaKnown RBP-0.02□□□□□ -2.41
NF1-213ENST00000489712 RPS27LQ71UM5 84 aaKnown RBP-0.02□□□□□ -2.41
NF1-213ENST00000489712 ABCA6Q8N139 1617 aa-0.02□□□□□ -2.41
NF1-213ENST00000489712 MAP1AP78559 2803 aaPredicted RBP-0.03□□□□□ -2.41
NF1-213ENST00000489712 LRP2P98164 4655 aa-0.03□□□□□ -2.41
NF1-213ENST00000489712 SETD2Q9BYW2 2564 aaPredicted RBP-0.03□□□□□ -2.41
NF1-213ENST00000489712 M0R1W7 72 aa-0.03□□□□□ -2.41
NF1-213ENST00000489712 SFTA3P0C7M3 94 aa-0.03□□□□□ -2.41
NF1-213ENST00000489712 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.41
NF1-213ENST00000489712 ERICH3Q5RHP9 1530 aa-0.03□□□□□ -2.41
NF1-213ENST00000489712 KRTAP6-2Q3LI66 62 aa-0.04□□□□□ -2.42
NF1-213ENST00000489712 ABCA10Q8WWZ4 1543 aa-0.04□□□□□ -2.42
NF1-213ENST00000489712 NBEAL1Q6ZS30 2694 aa-0.04□□□□□ -2.42
NF1-213ENST00000489712 NF1P21359 2839 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 TIAM1Q13009 1591 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 STAB1Q9NY15 2570 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 SPRR2EP22531 72 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 NOP10Q9NPE3 64 aaKnown RBP-0.05□□□□□ -2.42
NF1-213ENST00000489712 TMEM167BQ9NRX6 74 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 CLASP1Q7Z460 1538 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 LRP1BQ9NZR2 4599 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 TOGARAM1Q9Y4F4 1720 aa-0.05□□□□□ -2.42
NF1-213ENST00000489712 LY75O60449 1722 aa-0.06□□□□□ -2.42
NF1-213ENST00000489712 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
NF1-213ENST00000489712 ABRACLQ9P1F3 81 aa-0.06□□□□□ -2.42
NF1-213ENST00000489712 CROCC2H7BZ55 1655 aa-0.06□□□□□ -2.42
NF1-213ENST00000489712 PDZD2O15018 2839 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms