RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 IGLV5-48A0A075B6I7 105 aa12.04□□□□□ -0.48
HOXA9-205ENST00000489695 CD164Q04900 197 aa12.04□□□□□ -0.48
HOXA9-205ENST00000489695 SMIM29Q86T20 159 aa12.04□□□□□ -0.48
HOXA9-205ENST00000489695 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
HOXA9-205ENST00000489695 Q1RN00 199 aa12.02□□□□□ -0.49
HOXA9-205ENST00000489695 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
HOXA9-205ENST00000489695 SMIM11BQ8TCY0 68 aa12.01□□□□□ -0.49
HOXA9-205ENST00000489695 C9orf92A6NGG3 77 aa12□□□□□ -0.49
HOXA9-205ENST00000489695 DLEU1O43261 78 aa11.99□□□□□ -0.49
HOXA9-205ENST00000489695 FLGP20930 4061 aaPredicted RBP11.99□□□□□ -0.49
HOXA9-205ENST00000489695 NHP2Q9NX24 153 aaKnown RBP11.98□□□□□ -0.49
HOXA9-205ENST00000489695 M0R2T5 61 aa11.97□□□□□ -0.49
HOXA9-205ENST00000489695 UQCR10Q9UDW1 63 aa11.97□□□□□ -0.49
HOXA9-205ENST00000489695 Q5XG85 94 aa11.96□□□□□ -0.49
HOXA9-205ENST00000489695 TSTD3H0UI37 97 aa11.94□□□□□ -0.5
HOXA9-205ENST00000489695 H7C2G1 150 aa11.94□□□□□ -0.5
HOXA9-205ENST00000489695 VAMP3Q15836 100 aa11.92□□□□□ -0.5
HOXA9-205ENST00000489695 C2orf91Q6ZV80 131 aa11.92□□□□□ -0.5
HOXA9-205ENST00000489695 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
HOXA9-205ENST00000489695 HIGD1BQ9P298 99 aa11.89□□□□□ -0.51
HOXA9-205ENST00000489695 A0A0G2JQZ4 141 aa11.86□□□□□ -0.51
HOXA9-205ENST00000489695 COX6B2Q6YFQ2 88 aa11.86□□□□□ -0.51
HOXA9-205ENST00000489695 C1orf195Q5TG92 126 aa11.85□□□□□ -0.51
HOXA9-205ENST00000489695 KRTAP9-7A8MTY7 169 aa11.84□□□□□ -0.51
HOXA9-205ENST00000489695 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
HOXA9-205ENST00000489695 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
HOXA9-205ENST00000489695 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.83□□□□□ -0.52
HOXA9-205ENST00000489695 RPL37P61927 97 aaKnown RBP11.82□□□□□ -0.52
HOXA9-205ENST00000489695 Q6ZQY7 126 aa11.81□□□□□ -0.52
HOXA9-205ENST00000489695 PCP4L1A6NKN8 68 aa11.79□□□□□ -0.52
HOXA9-205ENST00000489695 HSD52Q0P140 79 aa11.79□□□□□ -0.52
HOXA9-205ENST00000489695 F8WEM9 126 aa11.78□□□□□ -0.52
HOXA9-205ENST00000489695 BVES-AS1Q5T3Y7 98 aa11.77□□□□□ -0.53
HOXA9-205ENST00000489695 TCL1BO95988 128 aa11.76□□□□□ -0.53
HOXA9-205ENST00000489695 Q6JHZ5 121 aa11.76□□□□□ -0.53
HOXA9-205ENST00000489695 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
HOXA9-205ENST00000489695 CEND1Q8N111 149 aa11.76□□□□□ -0.53
HOXA9-205ENST00000489695 PPDPFLQ8WWR9 84 aa11.74□□□□□ -0.53
HOXA9-205ENST00000489695 OCIAD2Q56VL3 154 aa11.73□□□□□ -0.53
HOXA9-205ENST00000489695 CFC1P0CG37 223 aa11.71□□□□□ -0.53
HOXA9-205ENST00000489695 FXYD2P54710 66 aa11.71□□□□□ -0.53
HOXA9-205ENST00000489695 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
HOXA9-205ENST00000489695 CLEC2BQ92478 149 aa11.71□□□□□ -0.53
HOXA9-205ENST00000489695 M0R143 59 aa11.69□□□□□ -0.54
HOXA9-205ENST00000489695 SSPOA2VEC9 5147 aa11.68□□□□□ -0.54
HOXA9-205ENST00000489695 TRBV7-7A0A0K0K1E9 115 aa11.68□□□□□ -0.54
HOXA9-205ENST00000489695 TMEM238LA0A1B0GVL6 79 aa11.67□□□□□ -0.54
HOXA9-205ENST00000489695 A6NJY4 79 aa11.67□□□□□ -0.54
HOXA9-205ENST00000489695 USH2AO75445 5202 aa11.67□□□□□ -0.54
HOXA9-205ENST00000489695 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
HOXA9-205ENST00000489695 BATFQ16520 125 aa11.65□□□□□ -0.54
HOXA9-205ENST00000489695 SNHG12Q9BXW3 62 aa11.65□□□□□ -0.54
HOXA9-205ENST00000489695 RAB37Q96AX2 223 aa11.64□□□□□ -0.55
HOXA9-205ENST00000489695 H0YGX0 51 aa11.63□□□□□ -0.55
HOXA9-205ENST00000489695 K7ERJ3 54 aa11.6□□□□□ -0.55
HOXA9-205ENST00000489695 SNCGO76070 127 aa11.6□□□□□ -0.55
HOXA9-205ENST00000489695 H3BUT2 72 aa11.58□□□□□ -0.56
HOXA9-205ENST00000489695 FAM218AQ96MZ4 157 aa11.58□□□□□ -0.56
HOXA9-205ENST00000489695 KRTAP9-8Q9BYQ0 159 aa11.57□□□□□ -0.56
HOXA9-205ENST00000489695 Q6Q795 121 aa11.56□□□□□ -0.56
HOXA9-205ENST00000489695 PRO1854Q9UHT4 67 aa11.56□□□□□ -0.56
HOXA9-205ENST00000489695 A0A1B0GX51 115 aa11.54□□□□□ -0.56
HOXA9-205ENST00000489695 NDUFV3P56181 108 aaKnown RBP11.53□□□□□ -0.56
HOXA9-205ENST00000489695 FCGBPQ9Y6R7 5405 aaPredicted RBP11.51□□□□□ -0.57
HOXA9-205ENST00000489695 LST1O00453 97 aa11.51□□□□□ -0.57
HOXA9-205ENST00000489695 TEN1Q86WV5 123 aa11.5□□□□□ -0.57
HOXA9-205ENST00000489695 GHRHP01286 108 aa11.49□□□□□ -0.57
HOXA9-205ENST00000489695 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
HOXA9-205ENST00000489695 COL5A1-AS1Q5SY13 56 aa11.48□□□□□ -0.57
HOXA9-205ENST00000489695 ATP11AUNQ6ZP68 121 aa11.48□□□□□ -0.57
HOXA9-205ENST00000489695 Q75L30 129 aa11.47□□□□□ -0.57
HOXA9-205ENST00000489695 OBSCN-AS1Q96MR7 158 aa11.47□□□□□ -0.57
HOXA9-205ENST00000489695 H3BMG7 143 aa11.44□□□□□ -0.58
HOXA9-205ENST00000489695 TAX1BP3O14907 124 aa11.44□□□□□ -0.58
HOXA9-205ENST00000489695 TRIAP1O43715 76 aa11.44□□□□□ -0.58
HOXA9-205ENST00000489695 PSMB2P49721 201 aa11.42□□□□□ -0.58
HOXA9-205ENST00000489695 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
HOXA9-205ENST00000489695 FABP2P12104 132 aa11.41□□□□□ -0.58
HOXA9-205ENST00000489695 A0A087WSZ3 146 aa11.4□□□□□ -0.58
HOXA9-205ENST00000489695 C9orf118A6NHY6 69 aa11.39□□□□□ -0.59
HOXA9-205ENST00000489695 Q96NJ1 140 aa11.38□□□□□ -0.59
HOXA9-205ENST00000489695 A0A1W2PNM2 257 aa11.36□□□□□ -0.59
HOXA9-205ENST00000489695 H3BQ85 93 aa11.36□□□□□ -0.59
HOXA9-205ENST00000489695 COX6CP09669 75 aa11.35□□□□□ -0.59
HOXA9-205ENST00000489695 SCGB1C2P0DMR2 95 aa11.35□□□□□ -0.59
HOXA9-205ENST00000489695 KRTAP19-1Q8IUB9 90 aa11.35□□□□□ -0.59
HOXA9-205ENST00000489695 C20orf166-AS1Q96NR2 134 aa11.35□□□□□ -0.59
HOXA9-205ENST00000489695 ORMDL1Q9P0S3 153 aa11.33□□□□□ -0.6
HOXA9-205ENST00000489695 DNAL4O96015 105 aa11.32□□□□□ -0.6
HOXA9-205ENST00000489695 A0A1W2PPM0 123 aa11.31□□□□□ -0.6
HOXA9-205ENST00000489695 A8MUU9 505 aa11.31□□□□□ -0.6
HOXA9-205ENST00000489695 MT2AP02795 61 aa11.31□□□□□ -0.6
HOXA9-205ENST00000489695 TRBV7-4A0A0J9YYF1 115 aa11.3□□□□□ -0.6
HOXA9-205ENST00000489695 TMEM256-PLSCR3K7ERE1 68 aa11.3□□□□□ -0.6
HOXA9-205ENST00000489695 LCE2BO14633 110 aa11.3□□□□□ -0.6
HOXA9-205ENST00000489695 ANKRD29Q8N6D5 301 aa11.3□□□□□ -0.6
HOXA9-205ENST00000489695 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
HOXA9-205ENST00000489695 MACF1Q9UPN3 7388 aaKnown RBP11.27□□□□□ -0.61
HOXA9-205ENST00000489695 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
HOXA9-205ENST00000489695 SYNE2Q8WXH0 6885 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms