RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 HIST1H4AP62805 103 aaKnown RBP4.82□□□□□ -1.64
SSR1-210ENST00000489567 UBE2BP63146 152 aa4.82□□□□□ -1.64
SSR1-210ENST00000489567 C1orf137Q5JT78 98 aa4.82□□□□□ -1.64
SSR1-210ENST00000489567 MIR7-3HGQ8N6C7 128 aa4.82□□□□□ -1.64
SSR1-210ENST00000489567 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
SSR1-210ENST00000489567 LRP1Q07954 4544 aaKnown RBP4.81□□□□□ -1.64
SSR1-210ENST00000489567 IGLV5-37A0A075B6J1 123 aa4.81□□□□□ -1.64
SSR1-210ENST00000489567 RPL37AP8A6NKH3 93 aa4.81□□□□□ -1.64
SSR1-210ENST00000489567 SLC25A20O43772 301 aa4.81□□□□□ -1.64
SSR1-210ENST00000489567 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
SSR1-210ENST00000489567 DAND5Q8N907 189 aa4.81□□□□□ -1.64
SSR1-210ENST00000489567 LINC00167Q96N53 147 aa4.81□□□□□ -1.64
SSR1-210ENST00000489567 TTTY13Q9BZ97 58 aa4.81□□□□□ -1.64
SSR1-210ENST00000489567 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
SSR1-210ENST00000489567 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
SSR1-210ENST00000489567 A0A0J9YXY3 114 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
SSR1-210ENST00000489567 IGLV7-43P04211 117 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
SSR1-210ENST00000489567 IGKV2-28A0A075B6P5 120 aa4.78□□□□□ -1.64
SSR1-210ENST00000489567 IGKV2D-28P01615 120 aa4.78□□□□□ -1.64
SSR1-210ENST00000489567 SOSTDC1Q6X4U4 206 aa4.78□□□□□ -1.64
SSR1-210ENST00000489567 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
SSR1-210ENST00000489567 LITAFQ99732 161 aa4.78□□□□□ -1.64
SSR1-210ENST00000489567 FAT3Q8TDW7 4589 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 IGLV1-50A0A075B6I6 118 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 LOC107984156A0A0G2JMH3 177 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 ZNF815PA8K554 130 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 NDUFS5O43920 106 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 ARL17AQ8IVW1 177 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 NCR3O14931 201 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
SSR1-210ENST00000489567 BCE1O60756 84 aa4.76□□□□□ -1.65
SSR1-210ENST00000489567 TRBV10-2A0A0K0K1G8 114 aa4.75□□□□□ -1.65
SSR1-210ENST00000489567 FP248Q71RG6 208 aaPredicted RBP4.75□□□□□ -1.65
SSR1-210ENST00000489567 M0R378 163 aa4.75□□□□□ -1.65
SSR1-210ENST00000489567 ZNF861PO60384 105 aa4.75□□□□□ -1.65
SSR1-210ENST00000489567 ATXN8Q156A1 80 aa4.75□□□□□ -1.65
SSR1-210ENST00000489567 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
SSR1-210ENST00000489567 H0Y9J4 135 aa4.74□□□□□ -1.65
SSR1-210ENST00000489567 TIMM17BO60830 172 aa4.74□□□□□ -1.65
SSR1-210ENST00000489567 KRTAP13-1Q8IUC0 172 aa4.74□□□□□ -1.65
SSR1-210ENST00000489567 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
SSR1-210ENST00000489567 TRBV10-3A0A0K0K1G6 114 aa4.73□□□□□ -1.65
SSR1-210ENST00000489567 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
SSR1-210ENST00000489567 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
SSR1-210ENST00000489567 KRTAP1-4P0C5Y4 121 aa4.73□□□□□ -1.65
SSR1-210ENST00000489567 PRLHP81277 87 aa4.73□□□□□ -1.65
SSR1-210ENST00000489567 DMBT1Q9UGM3 2413 aaPredicted RBP4.72□□□□□ -1.65
SSR1-210ENST00000489567 HERC1Q15751 4861 aa4.72□□□□□ -1.65
SSR1-210ENST00000489567 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
SSR1-210ENST00000489567 NDUFC1O43677 76 aa4.72□□□□□ -1.65
SSR1-210ENST00000489567 Q6ZVQ6 151 aa4.72□□□□□ -1.65
SSR1-210ENST00000489567 RPL28P46779 137 aaKnown RBP4.71□□□□□ -1.66
SSR1-210ENST00000489567 UBE2AP49459 152 aa4.71□□□□□ -1.66
SSR1-210ENST00000489567 KRTAP10-8P60410 259 aa4.71□□□□□ -1.66
SSR1-210ENST00000489567 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
SSR1-210ENST00000489567 TNXBP22105 4242 aa4.71□□□□□ -1.66
SSR1-210ENST00000489567 KRTAP4-16G5E9R7 235 aaPredicted RBP4.71□□□□□ -1.66
SSR1-210ENST00000489567 SPRR1AP35321 89 aa4.71□□□□□ -1.66
SSR1-210ENST00000489567 IGLV6-57P01721 117 aa4.7□□□□□ -1.66
SSR1-210ENST00000489567 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
SSR1-210ENST00000489567 CYSTM1Q9H1C7 97 aa4.7□□□□□ -1.66
SSR1-210ENST00000489567 TEX49A0A1B0GTD5 131 aa4.69□□□□□ -1.66
SSR1-210ENST00000489567 CCKP06307 115 aa4.69□□□□□ -1.66
SSR1-210ENST00000489567 S100A7L2Q5SY68 101 aa4.69□□□□□ -1.66
SSR1-210ENST00000489567 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
SSR1-210ENST00000489567 LINC00337Q8N6G1 96 aa4.69□□□□□ -1.66
SSR1-210ENST00000489567 ANAPC11Q9NYG5 84 aa4.69□□□□□ -1.66
SSR1-210ENST00000489567 A0A087X002 238 aa4.67□□□□□ -1.66
SSR1-210ENST00000489567 HIGD2AQ9BW72 106 aa4.67□□□□□ -1.66
SSR1-210ENST00000489567 PRO1854Q9UHT4 67 aa4.67□□□□□ -1.66
SSR1-210ENST00000489567 TRAV23DV6A0A075B6W5 121 aa4.66□□□□□ -1.66
SSR1-210ENST00000489567 ETDCA0A1B0GVM5 59 aa4.66□□□□□ -1.66
SSR1-210ENST00000489567 ZNF73O43830 326 aaPredicted RBP4.66□□□□□ -1.66
SSR1-210ENST00000489567 SMCR5Q8TEV8 140 aa4.66□□□□□ -1.66
SSR1-210ENST00000489567 LCA10Q71F78 164 aa4.66□□□□□ -1.66
SSR1-210ENST00000489567 Q9BRP9 147 aa4.66□□□□□ -1.66
SSR1-210ENST00000489567 ERC2-IT1O76042 136 aa4.65□□□□□ -1.66
SSR1-210ENST00000489567 RBM3P98179 157 aaKnown RBP4.65□□□□□ -1.66
SSR1-210ENST00000489567 Q6JHZ5 121 aa4.65□□□□□ -1.66
SSR1-210ENST00000489567 Q6ZRX8 168 aa4.64□□□□□ -1.67
SSR1-210ENST00000489567 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
SSR1-210ENST00000489567 H7BZZ5 65 aa4.64□□□□□ -1.67
SSR1-210ENST00000489567 TMEM256-PLSCR3K7ERE1 68 aa4.64□□□□□ -1.67
SSR1-210ENST00000489567 KLKP1Q107X0 134 aa4.64□□□□□ -1.67
SSR1-210ENST00000489567 KRTAP13-2Q52LG2 175 aa4.64□□□□□ -1.67
SSR1-210ENST00000489567 TRAV13-2A0A0B4J235 113 aa4.63□□□□□ -1.67
SSR1-210ENST00000489567 COX6CP09669 75 aa4.63□□□□□ -1.67
SSR1-210ENST00000489567 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
SSR1-210ENST00000489567 CFC1P0CG37 223 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms