RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
SMIM11A-206ENST00000489469 COX6CP09669 75 aa9.07□□□□□ -0.96
SMIM11A-206ENST00000489469 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.07□□□□□ -0.96
SMIM11A-206ENST00000489469 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
SMIM11A-206ENST00000489469 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
SMIM11A-206ENST00000489469 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
SMIM11A-206ENST00000489469 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
SMIM11A-206ENST00000489469 A0A1B0GX51 115 aa9.06□□□□□ -0.96
SMIM11A-206ENST00000489469 PSMB2P49721 201 aa9.06□□□□□ -0.96
SMIM11A-206ENST00000489469 TRIAP1O43715 76 aa9.05□□□□□ -0.96
SMIM11A-206ENST00000489469 TSPAN13O95857 204 aa9.05□□□□□ -0.96
SMIM11A-206ENST00000489469 MOBPQ13875 183 aa9.05□□□□□ -0.96
SMIM11A-206ENST00000489469 KRTAP19-4Q3LI73 84 aa9.05□□□□□ -0.96
SMIM11A-206ENST00000489469 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
SMIM11A-206ENST00000489469 Q6ZQY7 126 aa9.05□□□□□ -0.96
SMIM11A-206ENST00000489469 HERC1Q15751 4861 aa9.04□□□□□ -0.96
SMIM11A-206ENST00000489469 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
SMIM11A-206ENST00000489469 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
SMIM11A-206ENST00000489469 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
SMIM11A-206ENST00000489469 Q8NBF4 154 aa9.04□□□□□ -0.96
SMIM11A-206ENST00000489469 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
SMIM11A-206ENST00000489469 Q8N377 158 aa9.01□□□□□ -0.97
SMIM11A-206ENST00000489469 FAM218AQ96MZ4 157 aa9□□□□□ -0.97
SMIM11A-206ENST00000489469 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
SMIM11A-206ENST00000489469 F8WEM9 126 aa8.98□□□□□ -0.97
SMIM11A-206ENST00000489469 DNAL4O96015 105 aa8.97□□□□□ -0.97
SMIM11A-206ENST00000489469 SPINK1P00995 79 aa8.97□□□□□ -0.97
SMIM11A-206ENST00000489469 SCGB1C2P0DMR2 95 aa8.97□□□□□ -0.97
SMIM11A-206ENST00000489469 BATFQ16520 125 aa8.96□□□□□ -0.98
SMIM11A-206ENST00000489469 CLEC2BQ92478 149 aa8.96□□□□□ -0.98
SMIM11A-206ENST00000489469 H3BQ85 93 aa8.95□□□□□ -0.98
SMIM11A-206ENST00000489469 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
SMIM11A-206ENST00000489469 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
SMIM11A-206ENST00000489469 TRACP01848 142 aa8.92□□□□□ -0.98
SMIM11A-206ENST00000489469 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
SMIM11A-206ENST00000489469 ORMDL1Q9P0S3 153 aa8.92□□□□□ -0.98
SMIM11A-206ENST00000489469 LST1O00453 97 aa8.91□□□□□ -0.98
SMIM11A-206ENST00000489469 CD164Q04900 197 aa8.91□□□□□ -0.98
SMIM11A-206ENST00000489469 Q6JHZ5 121 aa8.91□□□□□ -0.98
SMIM11A-206ENST00000489469 IGLV8-61A0A075B6I0 122 aa8.9□□□□□ -0.98
SMIM11A-206ENST00000489469 TMEM256-PLSCR3K7ERE1 68 aa8.88□□□□□ -0.99
SMIM11A-206ENST00000489469 FABP2P12104 132 aa8.88□□□□□ -0.99
SMIM11A-206ENST00000489469 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
SMIM11A-206ENST00000489469 ATXN8Q156A1 80 aa8.87□□□□□ -0.99
SMIM11A-206ENST00000489469 LIMD2Q9BT23 127 aa8.87□□□□□ -0.99
SMIM11A-206ENST00000489469 PRR4Q16378 134 aa8.86□□□□□ -0.99
SMIM11A-206ENST00000489469 NAA38Q9BRA0 125 aaKnown RBP8.86□□□□□ -0.99
SMIM11A-206ENST00000489469 TRBV20-1A0A075B6N2 111 aa8.85□□□□□ -0.99
SMIM11A-206ENST00000489469 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
SMIM11A-206ENST00000489469 H3BUT2 72 aa8.84□□□□□ -0.99
SMIM11A-206ENST00000489469 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
SMIM11A-206ENST00000489469 TAX1BP3O14907 124 aa8.83□□□□□ -1
SMIM11A-206ENST00000489469 TCL1BO95988 128 aa8.83□□□□□ -1
SMIM11A-206ENST00000489469 UBE2V1Q13404 147 aa8.83□□□□□ -1
SMIM11A-206ENST00000489469 KRTAP9-9Q9BYP9 154 aa8.83□□□□□ -1
SMIM11A-206ENST00000489469 KRTAP9-4Q9BYQ2 154 aa8.83□□□□□ -1
SMIM11A-206ENST00000489469 HMCN2Q8NDA2 5059 aa8.82□□□□□ -1
SMIM11A-206ENST00000489469 H3BMG7 143 aa8.82□□□□□ -1
SMIM11A-206ENST00000489469 COL5A1-AS1Q5SY13 56 aa8.82□□□□□ -1
SMIM11A-206ENST00000489469 IGFL1Q6UW32 110 aa8.82□□□□□ -1
SMIM11A-206ENST00000489469 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
SMIM11A-206ENST00000489469 RETNLBQ9BQ08 111 aa8.82□□□□□ -1
SMIM11A-206ENST00000489469 Q5XG85 94 aa8.81□□□□□ -1
SMIM11A-206ENST00000489469 CDIP1Q9H305 208 aa8.8□□□□□ -1
SMIM11A-206ENST00000489469 A0A0G2JQZ4 141 aa8.79□□□□□ -1
SMIM11A-206ENST00000489469 A0A1W2PPM0 123 aa8.79□□□□□ -1
SMIM11A-206ENST00000489469 PCP4L1A6NKN8 68 aa8.79□□□□□ -1
SMIM11A-206ENST00000489469 BAALC-AS2P0C853 105 aa8.79□□□□□ -1
SMIM11A-206ENST00000489469 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
SMIM11A-206ENST00000489469 Q6Q795 121 aa8.77□□□□□ -1.01
SMIM11A-206ENST00000489469 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
SMIM11A-206ENST00000489469 ANKRD29Q8N6D5 301 aa8.76□□□□□ -1.01
SMIM11A-206ENST00000489469 TEN1Q86WV5 123 aa8.75□□□□□ -1.01
SMIM11A-206ENST00000489469 RBM3P98179 157 aaKnown RBP8.73□□□□□ -1.01
SMIM11A-206ENST00000489469 C9JAW5 83 aa8.72□□□□□ -1.01
SMIM11A-206ENST00000489469 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
SMIM11A-206ENST00000489469 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
SMIM11A-206ENST00000489469 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
SMIM11A-206ENST00000489469 JMJD7-PLA2G4BH0Y9G9 81 aa8.71□□□□□ -1.02
SMIM11A-206ENST00000489469 DSCR8Q96T75 97 aa8.7□□□□□ -1.02
SMIM11A-206ENST00000489469 SPCS1Q9Y6A9 102 aa8.7□□□□□ -1.02
SMIM11A-206ENST00000489469 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
SMIM11A-206ENST00000489469 A0A1B0GV72 72 aa8.69□□□□□ -1.02
SMIM11A-206ENST00000489469 H3BT86 120 aa8.68□□□□□ -1.02
SMIM11A-206ENST00000489469 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
SMIM11A-206ENST00000489469 C1orf195Q5TG92 126 aa8.67□□□□□ -1.02
SMIM11A-206ENST00000489469 CCKP06307 115 aa8.66□□□□□ -1.02
SMIM11A-206ENST00000489469 LRP2P98164 4655 aa8.66□□□□□ -1.02
SMIM11A-206ENST00000489469 A0A087WSZ3 146 aa8.65□□□□□ -1.02
SMIM11A-206ENST00000489469 KRTAP4-8A0A0G2JLE6 195 aa8.64□□□□□ -1.03
SMIM11A-206ENST00000489469 PDE6GP18545 87 aa8.64□□□□□ -1.03
SMIM11A-206ENST00000489469 C21orf62-AS1Q17RA5 79 aa8.64□□□□□ -1.03
SMIM11A-206ENST00000489469 KRTAP13-3Q3SY46 172 aa8.64□□□□□ -1.03
SMIM11A-206ENST00000489469 K7EP34 96 aa8.62□□□□□ -1.03
SMIM11A-206ENST00000489469 LPAP08519 4548 aa8.61□□□□□ -1.03
SMIM11A-206ENST00000489469 LOC110117498A0A087WWA1 95 aa8.61□□□□□ -1.03
SMIM11A-206ENST00000489469 OBSCN-AS1Q96MR7 158 aa8.61□□□□□ -1.03
SMIM11A-206ENST00000489469 VPS25Q9BRG1 176 aa8.61□□□□□ -1.03
SMIM11A-206ENST00000489469 GTF2H5Q6ZYL4 71 aa8.6□□□□□ -1.03
SMIM11A-206ENST00000489469 A0A1B0GW54 56 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms