RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LINC01546A6NGU7 62 aa4.77□□□□□ -1.65
SSBP1-212ENST00000489378 PSPHP1O15172 72 aa4.77□□□□□ -1.65
SSBP1-212ENST00000489378 SPINK8P0C7L1 97 aa4.77□□□□□ -1.65
SSBP1-212ENST00000489378 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
SSBP1-212ENST00000489378 ORMDL3Q8N138 153 aa4.77□□□□□ -1.65
SSBP1-212ENST00000489378 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
SSBP1-212ENST00000489378 MT1FP04733 61 aa4.76□□□□□ -1.65
SSBP1-212ENST00000489378 SPRR1AP35321 89 aa4.75□□□□□ -1.65
SSBP1-212ENST00000489378 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
SSBP1-212ENST00000489378 C6orf99Q4VX62 202 aa4.75□□□□□ -1.65
SSBP1-212ENST00000489378 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
SSBP1-212ENST00000489378 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
SSBP1-212ENST00000489378 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
SSBP1-212ENST00000489378 SMIM26A0A096LP01 95 aa4.74□□□□□ -1.65
SSBP1-212ENST00000489378 SERF1AO75920 110 aa4.74□□□□□ -1.65
SSBP1-212ENST00000489378 PMCHL1Q16048 86 aa4.74□□□□□ -1.65
SSBP1-212ENST00000489378 COA6Q5JTJ3 125 aaKnown RBP4.74□□□□□ -1.65
SSBP1-212ENST00000489378 C9orf153Q5TBE3 101 aa4.74□□□□□ -1.65
SSBP1-212ENST00000489378 MP68P56378 58 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 HRCT1Q6UXD1 115 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 Q8N8P6 123 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 LINC00846Q9NV44 126 aa4.73□□□□□ -1.65
SSBP1-212ENST00000489378 ETDCA0A1B0GVM5 59 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 COL5A1-AS1Q5SY13 56 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 IGHV6-1A0A0B4J1U7 121 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 IGLV5-39A0A0G2JS06 123 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 NDUFA6P56556 154 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 ZNF625Q96I27 306 aaPredicted RBP4.72□□□□□ -1.65
SSBP1-212ENST00000489378 SNHG12Q9BXW3 62 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 KCNQ1DNQ9H478 68 aa4.72□□□□□ -1.65
SSBP1-212ENST00000489378 DPM2O94777 84 aa4.71□□□□□ -1.66
SSBP1-212ENST00000489378 ORMDL2Q53FV1 153 aa4.71□□□□□ -1.66
SSBP1-212ENST00000489378 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
SSBP1-212ENST00000489378 LIMD2Q9BT23 127 aa4.71□□□□□ -1.66
SSBP1-212ENST00000489378 COX17Q14061 63 aa4.7□□□□□ -1.66
SSBP1-212ENST00000489378 Q9BRP9 147 aa4.7□□□□□ -1.66
SSBP1-212ENST00000489378 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
SSBP1-212ENST00000489378 GTF2H5Q6ZYL4 71 aa4.69□□□□□ -1.66
SSBP1-212ENST00000489378 IMUPQ9GZP8 106 aa4.69□□□□□ -1.66
SSBP1-212ENST00000489378 NXT2Q9NPJ8 142 aaKnown RBP4.69□□□□□ -1.66
SSBP1-212ENST00000489378 NCR3O14931 201 aa4.68□□□□□ -1.66
SSBP1-212ENST00000489378 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
SSBP1-212ENST00000489378 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
SSBP1-212ENST00000489378 CHCHD1Q96BP2 118 aaKnown RBP4.68□□□□□ -1.66
SSBP1-212ENST00000489378 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
SSBP1-212ENST00000489378 TRBV10-3A0A0K0K1G6 114 aa4.67□□□□□ -1.66
SSBP1-212ENST00000489378 SCGB1C2P0DMR2 95 aa4.67□□□□□ -1.66
SSBP1-212ENST00000489378 H3BRM9 83 aa4.66□□□□□ -1.66
SSBP1-212ENST00000489378 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
SSBP1-212ENST00000489378 NDUFV3P56181 108 aaKnown RBP4.66□□□□□ -1.66
SSBP1-212ENST00000489378 SCGB3A1Q96QR1 104 aa4.66□□□□□ -1.66
SSBP1-212ENST00000489378 K7EMI3 77 aa4.65□□□□□ -1.66
SSBP1-212ENST00000489378 HBDP02042 147 aa4.65□□□□□ -1.66
SSBP1-212ENST00000489378 LINC00158P58513 81 aa4.65□□□□□ -1.66
SSBP1-212ENST00000489378 ST20-AS1Q8NBB2 130 aa4.65□□□□□ -1.66
SSBP1-212ENST00000489378 OCR1Q9BZK8 76 aa4.65□□□□□ -1.66
SSBP1-212ENST00000489378 J3QQQ9 107 aa4.64□□□□□ -1.67
SSBP1-212ENST00000489378 FABP4P15090 132 aa4.64□□□□□ -1.67
SSBP1-212ENST00000489378 Q5XG85 94 aa4.64□□□□□ -1.67
SSBP1-212ENST00000489378 Q6ZRX8 168 aa4.64□□□□□ -1.67
SSBP1-212ENST00000489378 H7C2G1 150 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 C3orf79P0CE67 100 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 S100A2P29034 98 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 HSD52Q0P140 79 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 PRR15Q8IV56 129 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 PMCHL2Q9BQD1 86 aa4.63□□□□□ -1.67
SSBP1-212ENST00000489378 LEPROTL1O95214 131 aa4.62□□□□□ -1.67
SSBP1-212ENST00000489378 ZNF22P17026 224 aaPredicted RBP4.62□□□□□ -1.67
SSBP1-212ENST00000489378 IGLC3P0DOY3 106 aa4.61□□□□□ -1.67
SSBP1-212ENST00000489378 MEIG1Q5JSS6 88 aa4.61□□□□□ -1.67
SSBP1-212ENST00000489378 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
SSBP1-212ENST00000489378 C11orf86A6NJI1 115 aa4.6□□□□□ -1.67
SSBP1-212ENST00000489378 SYS1-DBNDD2H3BUS1 97 aa4.6□□□□□ -1.67
SSBP1-212ENST00000489378 LINC01545Q5VT33 79 aa4.6□□□□□ -1.67
SSBP1-212ENST00000489378 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 A8MUN3 132 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 LST1O00453 97 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 SMIM13P0DJ93 91 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 LINC00313P59037 77 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 KRTDAPP60985 99 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 HERVK_113P61574 105 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 PYY3Q5JQD4 70 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
SSBP1-212ENST00000489378 MDN1Q9NU22 5596 aa4.59□□□□□ -1.68
SSBP1-212ENST00000489378 SFTA2Q6UW10 78 aa4.58□□□□□ -1.68
SSBP1-212ENST00000489378 SMIM29Q86T20 159 aa4.58□□□□□ -1.68
SSBP1-212ENST00000489378 ATOH7Q8N100 152 aa4.58□□□□□ -1.68
SSBP1-212ENST00000489378 MIR7-3HGQ8N6C7 128 aa4.58□□□□□ -1.68
SSBP1-212ENST00000489378 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
SSBP1-212ENST00000489378 LGALS3P17931 250 aaKnown RBP4.57□□□□□ -1.68
SSBP1-212ENST00000489378 SPRR1BP22528 89 aa4.57□□□□□ -1.68
SSBP1-212ENST00000489378 TSPEAR-AS2P59090 65 aa4.57□□□□□ -1.68
SSBP1-212ENST00000489378 SLC25A34Q6PIV7 304 aa4.55□□□□□ -1.68
SSBP1-212ENST00000489378 LCA10Q71F78 164 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms