RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 C4BP0C0L5 1744 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 WDFY4Q6ZS81 3184 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 CFAP46Q8IYW2 2715 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 C2CD3Q4AC94 2353 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 FBN2P35556 2912 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 DNAH14Q0VDD8 3507 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 FRYQ5TBA9 3013 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 IGSF10Q6WRI0 2623 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 TNCP24821 2201 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 XIRP2A4UGR9 3374 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 TOGARAM1Q9Y4F4 1720 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 K7EQZ3 153 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 CHD9Q3L8U1 2897 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 KALRNO60229 2985 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 NFAT5O94916 1531 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 TRIOO75962 3097 aa1.04□□□□□ -2.24
PRPF4-203ENST00000488937 FAM208AQ9UK61 1670 aaKnown RBP1.04□□□□□ -2.24
PRPF4-203ENST00000488937 DSPP15924 2871 aaKnown RBP1.03□□□□□ -2.24
PRPF4-203ENST00000488937 SPEGQ15772 3267 aa1.03□□□□□ -2.24
PRPF4-203ENST00000488937 LRRK2Q5S007 2527 aa1.03□□□□□ -2.24
PRPF4-203ENST00000488937 GNG13Q9P2W3 67 aa1.03□□□□□ -2.24
PRPF4-203ENST00000488937 NF1P21359 2839 aa1.03□□□□□ -2.24
PRPF4-203ENST00000488937 DMXL1Q9Y485 3027 aa1.03□□□□□ -2.24
PRPF4-203ENST00000488937 SMG1Q96Q15 3661 aaKnown RBP1.03□□□□□ -2.25
PRPF4-203ENST00000488937 SPTBN2O15020 2390 aa1.02□□□□□ -2.25
PRPF4-203ENST00000488937 PIGYQ3MUY2 71 aa1.02□□□□□ -2.25
PRPF4-203ENST00000488937 TENM4Q6N022 2769 aa1.02□□□□□ -2.25
PRPF4-203ENST00000488937 CREBBPQ92793 2442 aa1.02□□□□□ -2.25
PRPF4-203ENST00000488937 MYO15AQ9UKN7 3530 aa1.02□□□□□ -2.25
PRPF4-203ENST00000488937 NBEAL1Q6ZS30 2694 aa1.02□□□□□ -2.25
PRPF4-203ENST00000488937 TLN1Q9Y490 2541 aaKnown RBP1.01□□□□□ -2.25
PRPF4-203ENST00000488937 SPG11Q96JI7 2443 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 DUOX1Q9NRD9 1551 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 CHD7Q9P2D1 2997 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 POLQO75417 2590 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 NOTCH1P46531 2555 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 SPTY2D1-AS1A0A0U1RR47 76 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 NDUFA4O00483 81 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 COX6A2Q02221 97 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 SMIM5Q71RC9 77 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 IGF2RP11717 2491 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 FLNCQ14315 2725 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 ATRQ13535 2644 aa1.01□□□□□ -2.25
PRPF4-203ENST00000488937 VPS13AQ96RL7 3174 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 USF3Q68DE3 2245 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 NBEAQ8NFP9 2946 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 USP9YO00507 2555 aaPredicted RBP1□□□□□ -2.25
PRPF4-203ENST00000488937 STAB1Q9NY15 2570 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 LINC01549A6NIU2 74 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 ENHOQ6UWT2 76 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 CRIPTQ9P021 101 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 DMXL2Q8TDJ6 3036 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 CACNA1EQ15878 2313 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 DMDP11532 3685 aa1□□□□□ -2.25
PRPF4-203ENST00000488937 FRYLO94915 3013 aa0.99□□□□□ -2.25
PRPF4-203ENST00000488937 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.99□□□□□ -2.25
PRPF4-203ENST00000488937 FREM2Q5SZK8 3169 aa0.99□□□□□ -2.25
PRPF4-203ENST00000488937 USMG5Q96IX5 58 aa0.99□□□□□ -2.25
PRPF4-203ENST00000488937 ITPR2Q14571 2701 aa0.99□□□□□ -2.25
PRPF4-203ENST00000488937 CCDC168Q8NDH2 2452 aa0.98□□□□□ -2.25
PRPF4-203ENST00000488937 LOC400499M0QZD8 3231 aa0.98□□□□□ -2.25
PRPF4-203ENST00000488937 RPL38P63173 70 aaKnown RBP0.98□□□□□ -2.25
PRPF4-203ENST00000488937 KCNQ1DNQ9H478 68 aa0.98□□□□□ -2.25
PRPF4-203ENST00000488937 PRO0255Q9UI72 69 aa0.98□□□□□ -2.25
PRPF4-203ENST00000488937 NIPBLQ6KC79 2804 aaeCLIP0.98□□□□□ -2.25
PRPF4-203ENST00000488937 RELNP78509 3460 aa0.98□□□□□ -2.25
PRPF4-203ENST00000488937 ANKHD1Q8IWZ3 2542 aaKnown RBP0.97□□□□□ -2.25
PRPF4-203ENST00000488937 COL12A1Q99715 3063 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 OTOGQ6ZRI0 2925 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 LRBAP50851 2863 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 LOC730098B7Z3J9 87 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 Q8IZM0 81 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 MRPL34Q9BQ48 92 aaKnown RBP0.97□□□□□ -2.25
PRPF4-203ENST00000488937 ANKRD36CQ5JPF3 1778 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 CENPEQ02224 2701 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 NBASA2RRP1 2371 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 PKD1L1Q8TDX9 2849 aa0.97□□□□□ -2.25
PRPF4-203ENST00000488937 CELSR2Q9HCU4 2923 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 A0A1B0GUL6 1792 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 CELSR3Q9NYQ7 3312 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 DNHD1Q96M86 4753 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 I3L3M4 83 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 Q5VSD8 79 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 PTPRQQ9UMZ3 2332 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 LAMA5O15230 3695 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 HIVEP3Q5T1R4 2406 aa0.96□□□□□ -2.26
PRPF4-203ENST00000488937 ACACAQ13085 2346 aa0.95□□□□□ -2.26
PRPF4-203ENST00000488937 PDZD2O15018 2839 aa0.95□□□□□ -2.26
PRPF4-203ENST00000488937 COL6A5A8TX70 2615 aa0.95□□□□□ -2.26
PRPF4-203ENST00000488937 HIVEP1P15822 2718 aa0.95□□□□□ -2.26
PRPF4-203ENST00000488937 F8P00451 2351 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 SPTBN1Q01082 2364 aaKnown RBP0.94□□□□□ -2.26
PRPF4-203ENST00000488937 APC2O95996 2303 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 WDFY3Q8IZQ1 3526 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 SPRR1AP35321 89 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 DEFB114Q30KQ6 69 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 COX6B2Q6YFQ2 88 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 UBL5Q9BZL1 73 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms