RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 H3BUA1 57 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 DEFB131AP59861 70 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 SPINK13Q1W4C9 94 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 CLPSL2Q6UWE3 100 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 FAM186AA6NE01 2351 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 PCNX1Q96RV3 2341 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 TRANK1O15050 2925 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 SPTBN2O15020 2390 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 INE1O15225 51 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 C6orf48Q9UBA6 75 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 CEP250Q9BV73 2442 aa1.39□□□□□ -2.19
SSR1-209ENST00000488834 PTPRZ1P23471 2315 aaPredicted RBP1.38□□□□□ -2.19
SSR1-209ENST00000488834 G3V318 75 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 LY6G6CO95867 125 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 RPL37AP61513 92 aaKnown RBP1.38□□□□□ -2.19
SSR1-209ENST00000488834 DEFB133Q30KQ1 61 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 C5orf56Q8N8D9 126 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 DEFB105AQ8NG35 78 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 SPTA1P02549 2419 aa1.38□□□□□ -2.19
SSR1-209ENST00000488834 PKDREJQ9NTG1 2253 aa1.37□□□□□ -2.19
SSR1-209ENST00000488834 SPRR1AP35321 89 aa1.37□□□□□ -2.19
SSR1-209ENST00000488834 DEFB109BQ30KR1 87 aa1.37□□□□□ -2.19
SSR1-209ENST00000488834 SSBP3-AS1Q7Z2R9 100 aa1.37□□□□□ -2.19
SSR1-209ENST00000488834 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
SSR1-209ENST00000488834 CACNA1EQ15878 2313 aa1.37□□□□□ -2.19
SSR1-209ENST00000488834 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
SSR1-209ENST00000488834 HTN1P15515 57 aa1.36□□□□□ -2.19
SSR1-209ENST00000488834 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
SSR1-209ENST00000488834 Q6ZRX8 168 aa1.36□□□□□ -2.19
SSR1-209ENST00000488834 AKAP6Q13023 2319 aa1.35□□□□□ -2.19
SSR1-209ENST00000488834 H0YAA0 97 aa1.35□□□□□ -2.19
SSR1-209ENST00000488834 Q6ZSA8 131 aa1.35□□□□□ -2.19
SSR1-209ENST00000488834 MRPL34Q9BQ48 92 aaKnown RBP1.35□□□□□ -2.19
SSR1-209ENST00000488834 FLG2Q5D862 2391 aaPredicted RBP1.35□□□□□ -2.19
SSR1-209ENST00000488834 CHD7Q9P2D1 2997 aa1.35□□□□□ -2.19
SSR1-209ENST00000488834 ZNF462Q96JM2 2506 aa1.34□□□□□ -2.19
SSR1-209ENST00000488834 TENM2Q9NT68 2774 aa1.34□□□□□ -2.19
SSR1-209ENST00000488834 SPRR1BP22528 89 aa1.34□□□□□ -2.19
SSR1-209ENST00000488834 CRIPTQ9P021 101 aa1.34□□□□□ -2.19
SSR1-209ENST00000488834 MAP1BP46821 2468 aaKnown RBP1.34□□□□□ -2.2
SSR1-209ENST00000488834 SPTBN4Q9H254 2564 aa1.34□□□□□ -2.2
SSR1-209ENST00000488834 CHD8Q9HCK8 2581 aa1.33□□□□□ -2.2
SSR1-209ENST00000488834 DEFB119Q8N690 84 aa1.33□□□□□ -2.2
SSR1-209ENST00000488834 U3KQA8 63 aa1.33□□□□□ -2.2
SSR1-209ENST00000488834 ROS1P08922 2347 aa1.32□□□□□ -2.2
SSR1-209ENST00000488834 H3BUX3 64 aa1.32□□□□□ -2.2
SSR1-209ENST00000488834 H1FX-AS1Q4G0G2 97 aa1.32□□□□□ -2.2
SSR1-209ENST00000488834 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
SSR1-209ENST00000488834 COL6A3P12111 3177 aa1.32□□□□□ -2.2
SSR1-209ENST00000488834 NCOR1O75376 2440 aa1.31□□□□□ -2.2
SSR1-209ENST00000488834 PLAC4Q8WY50 150 aa1.31□□□□□ -2.2
SSR1-209ENST00000488834 NOP10Q9NPE3 64 aaKnown RBP1.31□□□□□ -2.2
SSR1-209ENST00000488834 CEP350Q5VT06 3117 aa1.31□□□□□ -2.2
SSR1-209ENST00000488834 K7EIL1 84 aa1.3□□□□□ -2.2
SSR1-209ENST00000488834 LYNX1P0DP58 116 aa1.3□□□□□ -2.2
SSR1-209ENST00000488834 GVINP1Q7Z2Y8 2422 aa1.3□□□□□ -2.2
SSR1-209ENST00000488834 MAST4O15021 2626 aa1.3□□□□□ -2.2
SSR1-209ENST00000488834 KIAA1109Q2LD37 5005 aa1.3□□□□□ -2.2
SSR1-209ENST00000488834 EP300Q09472 2414 aaPredicted RBP1.29□□□□□ -2.2
SSR1-209ENST00000488834 SPG11Q96JI7 2443 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 DEFB130BP0DP73 79 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 DEFB130AP0DP74 79 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 PRO0255Q9UI72 69 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 CSPG4Q6UVK1 2322 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 C2CD3Q4AC94 2353 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 CHD6Q8TD26 2715 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 PCLOQ9Y6V0 5065 aa1.29□□□□□ -2.2
SSR1-209ENST00000488834 NCOR2Q9Y618 2525 aa1.28□□□□□ -2.2
SSR1-209ENST00000488834 USP9XQ93008 2570 aaPredicted RBP1.28□□□□□ -2.2
SSR1-209ENST00000488834 RPL37P61927 97 aaKnown RBP1.28□□□□□ -2.2
SSR1-209ENST00000488834 DEFB136Q30KP8 78 aa1.28□□□□□ -2.2
SSR1-209ENST00000488834 LELP1Q5T871 98 aa1.28□□□□□ -2.2
SSR1-209ENST00000488834 NBEAQ8NFP9 2946 aa1.27□□□□□ -2.21
SSR1-209ENST00000488834 SETXQ7Z333 2677 aaKnown RBP1.27□□□□□ -2.21
SSR1-209ENST00000488834 OTOGQ6ZRI0 2925 aa1.27□□□□□ -2.21
SSR1-209ENST00000488834 ITPR1Q14643 2758 aa1.26□□□□□ -2.21
SSR1-209ENST00000488834 PTPN13Q12923 2485 aa1.26□□□□□ -2.21
SSR1-209ENST00000488834 TNRC18O15417 2968 aaPredicted RBP1.26□□□□□ -2.21
SSR1-209ENST00000488834 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
SSR1-209ENST00000488834 CACNA1HO95180 2353 aa1.26□□□□□ -2.21
SSR1-209ENST00000488834 UBR5O95071 2799 aaPredicted RBP1.25□□□□□ -2.21
SSR1-209ENST00000488834 PRUNE2Q8WUY3 3088 aa1.25□□□□□ -2.21
SSR1-209ENST00000488834 ZZEF1O43149 2961 aa1.25□□□□□ -2.21
SSR1-209ENST00000488834 ABCA2Q9BZC7 2435 aa1.25□□□□□ -2.21
SSR1-209ENST00000488834 ASH1LQ9NR48 2969 aaKnown RBP1.25□□□□□ -2.21
SSR1-209ENST00000488834 NAV2Q8IVL1 2488 aa1.25□□□□□ -2.21
SSR1-209ENST00000488834 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
SSR1-209ENST00000488834 TEP1Q99973 2627 aaKnown RBP1.24□□□□□ -2.21
SSR1-209ENST00000488834 AKAP13Q12802 2813 aa1.24□□□□□ -2.21
SSR1-209ENST00000488834 PRLHP81277 87 aa1.24□□□□□ -2.21
SSR1-209ENST00000488834 C10orf99Q6UWK7 81 aa1.24□□□□□ -2.21
SSR1-209ENST00000488834 CREBBPQ92793 2442 aa1.24□□□□□ -2.21
SSR1-209ENST00000488834 MAP1AP78559 2803 aaPredicted RBP1.23□□□□□ -2.21
SSR1-209ENST00000488834 PIEZO2Q9H5I5 2752 aa1.23□□□□□ -2.21
SSR1-209ENST00000488834 A0A096LPF7 62 aa1.23□□□□□ -2.21
SSR1-209ENST00000488834 DEFB123Q8N688 67 aa1.23□□□□□ -2.21
SSR1-209ENST00000488834 NBASA2RRP1 2371 aa1.23□□□□□ -2.21
SSR1-209ENST00000488834 DSPP15924 2871 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms