RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 TCL1BO95988 128 aa13.25□□□□□ -0.29
SEMA3C-209ENST00000487621 F8WEM9 126 aa13.24□□□□□ -0.29
SEMA3C-209ENST00000487621 Q6JHZ5 121 aa13.2□□□□□ -0.3
SEMA3C-209ENST00000487621 IGFL1Q6UW32 110 aa13.2□□□□□ -0.3
SEMA3C-209ENST00000487621 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
SEMA3C-209ENST00000487621 C12orf57Q99622 126 aa13.18□□□□□ -0.3
SEMA3C-209ENST00000487621 TRBV7-7A0A0K0K1E9 115 aa13.17□□□□□ -0.3
SEMA3C-209ENST00000487621 OCIAD2Q56VL3 154 aa13.17□□□□□ -0.3
SEMA3C-209ENST00000487621 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.17□□□□□ -0.3
SEMA3C-209ENST00000487621 S100A6P06703 90 aa13.15□□□□□ -0.3
SEMA3C-209ENST00000487621 S100A1P23297 94 aa13.15□□□□□ -0.3
SEMA3C-209ENST00000487621 COX8AP10176 69 aa13.14□□□□□ -0.31
SEMA3C-209ENST00000487621 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
SEMA3C-209ENST00000487621 BVES-AS1Q5T3Y7 98 aa13.13□□□□□ -0.31
SEMA3C-209ENST00000487621 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
SEMA3C-209ENST00000487621 FLGP20930 4061 aaPredicted RBP13.12□□□□□ -0.31
SEMA3C-209ENST00000487621 SCGB1D1O95968 90 aa13.11□□□□□ -0.31
SEMA3C-209ENST00000487621 CFC1BP0CG36 223 aa13.11□□□□□ -0.31
SEMA3C-209ENST00000487621 DLEU1O43261 78 aa13.1□□□□□ -0.31
SEMA3C-209ENST00000487621 LORP23490 312 aaPredicted RBP13.08□□□□□ -0.32
SEMA3C-209ENST00000487621 FSIP2Q5CZC0 6907 aa13.08□□□□□ -0.32
SEMA3C-209ENST00000487621 CFC1P0CG37 223 aa13.06□□□□□ -0.32
SEMA3C-209ENST00000487621 KRTAP10-6P60371 365 aaPredicted RBP13.05□□□□□ -0.32
SEMA3C-209ENST00000487621 SNHG12Q9BXW3 62 aa13.05□□□□□ -0.32
SEMA3C-209ENST00000487621 H3BUT2 72 aa13.04□□□□□ -0.32
SEMA3C-209ENST00000487621 CRCT1Q9UGL9 99 aa13.02□□□□□ -0.33
SEMA3C-209ENST00000487621 C14orf144Q96I85 54 aa13.01□□□□□ -0.33
SEMA3C-209ENST00000487621 OBSCN-AS1Q96MR7 158 aa13□□□□□ -0.33
SEMA3C-209ENST00000487621 Q75L30 129 aa12.99□□□□□ -0.33
SEMA3C-209ENST00000487621 FAM218AQ96MZ4 157 aa12.99□□□□□ -0.33
SEMA3C-209ENST00000487621 HIGD1BQ9P298 99 aa12.99□□□□□ -0.33
SEMA3C-209ENST00000487621 A0A0B4J2C4 111 aa12.98□□□□□ -0.33
SEMA3C-209ENST00000487621 Q6Q795 121 aa12.98□□□□□ -0.33
SEMA3C-209ENST00000487621 LST1O00453 97 aa12.97□□□□□ -0.33
SEMA3C-209ENST00000487621 RAB37Q96AX2 223 aa12.97□□□□□ -0.33
SEMA3C-209ENST00000487621 COX6B2Q6YFQ2 88 aa12.96□□□□□ -0.33
SEMA3C-209ENST00000487621 C2orf91Q6ZV80 131 aa12.96□□□□□ -0.33
SEMA3C-209ENST00000487621 H0YGX0 51 aa12.95□□□□□ -0.34
SEMA3C-209ENST00000487621 PAM16Q9Y3D7 125 aa12.94□□□□□ -0.34
SEMA3C-209ENST00000487621 SPATA45Q537H7 98 aa12.93□□□□□ -0.34
SEMA3C-209ENST00000487621 M0R2T5 61 aa12.91□□□□□ -0.34
SEMA3C-209ENST00000487621 NDUFV3P56181 108 aaKnown RBP12.91□□□□□ -0.34
SEMA3C-209ENST00000487621 ATP11AUNQ6ZP68 121 aa12.91□□□□□ -0.34
SEMA3C-209ENST00000487621 TEN1Q86WV5 123 aa12.9□□□□□ -0.34
SEMA3C-209ENST00000487621 SS18L2Q9UHA2 77 aa12.89□□□□□ -0.35
SEMA3C-209ENST00000487621 SNCGO76070 127 aa12.87□□□□□ -0.35
SEMA3C-209ENST00000487621 CEND1Q8N111 149 aa12.87□□□□□ -0.35
SEMA3C-209ENST00000487621 Q96NJ1 140 aa12.86□□□□□ -0.35
SEMA3C-209ENST00000487621 A0A1B0GX51 115 aa12.85□□□□□ -0.35
SEMA3C-209ENST00000487621 C20orf166-AS1Q96NR2 134 aa12.85□□□□□ -0.35
SEMA3C-209ENST00000487621 VAMP8Q9BV40 100 aa12.85□□□□□ -0.35
SEMA3C-209ENST00000487621 A0A087WSZ3 146 aa12.83□□□□□ -0.36
SEMA3C-209ENST00000487621 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
SEMA3C-209ENST00000487621 H3BMG7 143 aa12.82□□□□□ -0.36
SEMA3C-209ENST00000487621 A8MUU9 505 aa12.81□□□□□ -0.36
SEMA3C-209ENST00000487621 FXYD2P54710 66 aa12.81□□□□□ -0.36
SEMA3C-209ENST00000487621 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
SEMA3C-209ENST00000487621 A0A1W2PNM2 257 aa12.78□□□□□ -0.36
SEMA3C-209ENST00000487621 A6NJY4 79 aa12.78□□□□□ -0.36
SEMA3C-209ENST00000487621 TRIAP1O43715 76 aa12.78□□□□□ -0.36
SEMA3C-209ENST00000487621 GHRHP01286 108 aa12.77□□□□□ -0.37
SEMA3C-209ENST00000487621 FABP2P12104 132 aa12.77□□□□□ -0.37
SEMA3C-209ENST00000487621 DSCR10P59022 87 aa12.71□□□□□ -0.37
SEMA3C-209ENST00000487621 TRBV7-4A0A0J9YYF1 115 aa12.65□□□□□ -0.38
SEMA3C-209ENST00000487621 HSD52Q0P140 79 aa12.64□□□□□ -0.39
SEMA3C-209ENST00000487621 PYY3Q5JQD4 70 aa12.64□□□□□ -0.39
SEMA3C-209ENST00000487621 ANKRD29Q8N6D5 301 aa12.64□□□□□ -0.39
SEMA3C-209ENST00000487621 SIGMAR1Q99720 223 aa12.64□□□□□ -0.39
SEMA3C-209ENST00000487621 ORMDL1Q9P0S3 153 aa12.64□□□□□ -0.39
SEMA3C-209ENST00000487621 KRTAP16-1A8MUX0 517 aa12.63□□□□□ -0.39
SEMA3C-209ENST00000487621 K7ERJ3 54 aa12.63□□□□□ -0.39
SEMA3C-209ENST00000487621 DNAL4O96015 105 aa12.62□□□□□ -0.39
SEMA3C-209ENST00000487621 H3BQ85 93 aa12.61□□□□□ -0.39
SEMA3C-209ENST00000487621 A0A1B0GV72 72 aa12.59□□□□□ -0.39
SEMA3C-209ENST00000487621 IGKV4-1P06312 121 aa12.59□□□□□ -0.39
SEMA3C-209ENST00000487621 LINC00313P59037 77 aa12.59□□□□□ -0.39
SEMA3C-209ENST00000487621 TMEM256-PLSCR3K7ERE1 68 aa12.58□□□□□ -0.4
SEMA3C-209ENST00000487621 PSMB2P49721 201 aa12.58□□□□□ -0.4
SEMA3C-209ENST00000487621 KRTAP9-8Q9BYQ0 159 aa12.58□□□□□ -0.4
SEMA3C-209ENST00000487621 LINC00472Q9H8W2 130 aa12.58□□□□□ -0.4
SEMA3C-209ENST00000487621 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
SEMA3C-209ENST00000487621 TRBV20-1A0A075B6N2 111 aa12.56□□□□□ -0.4
SEMA3C-209ENST00000487621 CCKP06307 115 aa12.53□□□□□ -0.4
SEMA3C-209ENST00000487621 COX6CP09669 75 aa12.53□□□□□ -0.4
SEMA3C-209ENST00000487621 DEFB116Q30KQ4 102 aa12.53□□□□□ -0.4
SEMA3C-209ENST00000487621 UBE2V1Q13404 147 aa12.52□□□□□ -0.41
SEMA3C-209ENST00000487621 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
SEMA3C-209ENST00000487621 KRTAP3-2Q9BYR7 98 aa12.5□□□□□ -0.41
SEMA3C-209ENST00000487621 TRACP01848 142 aa12.49□□□□□ -0.41
SEMA3C-209ENST00000487621 MPLKIPQ8TAP9 179 aa12.47□□□□□ -0.41
SEMA3C-209ENST00000487621 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.41
SEMA3C-209ENST00000487621 TMA7Q9Y2S6 64 aaKnown RBP12.46□□□□□ -0.41
SEMA3C-209ENST00000487621 USH2AO75445 5202 aa12.45□□□□□ -0.42
SEMA3C-209ENST00000487621 IGHV6-1A0A0B4J1U7 121 aa12.44□□□□□ -0.42
SEMA3C-209ENST00000487621 HRES1P13985 223 aa12.44□□□□□ -0.42
SEMA3C-209ENST00000487621 SSPOA2VEC9 5147 aa12.39□□□□□ -0.43
SEMA3C-209ENST00000487621 RBM3P98179 157 aaKnown RBP12.38□□□□□ -0.43
SEMA3C-209ENST00000487621 A0A1B0GVX0 72 aa12.37□□□□□ -0.43
SEMA3C-209ENST00000487621 VPS25Q9BRG1 176 aa12.37□□□□□ -0.43
SEMA3C-209ENST00000487621 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms