RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 ST20-AS1Q8NBB2 130 aa3.86□□□□□ -1.79
PTPRE-209ENST00000487428 PRO1933Q9H354 126 aa3.86□□□□□ -1.79
PTPRE-209ENST00000487428 TRIAP1O43715 76 aa3.85□□□□□ -1.79
PTPRE-209ENST00000487428 TSPAN13O95857 204 aa3.84□□□□□ -1.79
PTPRE-209ENST00000487428 TRACP01848 142 aa3.84□□□□□ -1.79
PTPRE-209ENST00000487428 Q6ZQY7 126 aa3.84□□□□□ -1.79
PTPRE-209ENST00000487428 MOBPQ13875 183 aa3.83□□□□□ -1.8
PTPRE-209ENST00000487428 Q1RN00 199 aa3.83□□□□□ -1.8
PTPRE-209ENST00000487428 C4orf48Q5BLP8 95 aa3.83□□□□□ -1.8
PTPRE-209ENST00000487428 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
PTPRE-209ENST00000487428 Q6JHZ5 121 aa3.83□□□□□ -1.8
PTPRE-209ENST00000487428 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
PTPRE-209ENST00000487428 H7C2G1 150 aa3.82□□□□□ -1.8
PTPRE-209ENST00000487428 K7ERJ3 54 aa3.82□□□□□ -1.8
PTPRE-209ENST00000487428 LST1O00453 97 aa3.82□□□□□ -1.8
PTPRE-209ENST00000487428 FP248Q71RG6 208 aaPredicted RBP3.82□□□□□ -1.8
PTPRE-209ENST00000487428 IGLV9-49A0A0B4J1Y8 123 aa3.81□□□□□ -1.8
PTPRE-209ENST00000487428 TMEM256-PLSCR3K7ERE1 68 aa3.81□□□□□ -1.8
PTPRE-209ENST00000487428 LYRM7Q5U5X0 104 aa3.81□□□□□ -1.8
PTPRE-209ENST00000487428 Q6Q795 121 aa3.81□□□□□ -1.8
PTPRE-209ENST00000487428 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 TRBV20-1A0A075B6N2 111 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 F8WEM9 126 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 DNAL4O96015 105 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 PSMB2P49721 201 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 UBE2V1Q13404 147 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 C9orf153Q5TBE3 101 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 DEFB105AQ8NG35 78 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 LIMD2Q9BT23 127 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 SNHG12Q9BXW3 62 aa3.8□□□□□ -1.8
PTPRE-209ENST00000487428 K7ERU9 68 aa3.79□□□□□ -1.8
PTPRE-209ENST00000487428 TPRXLQ17RH7 258 aa3.79□□□□□ -1.8
PTPRE-209ENST00000487428 CLEC2BQ92478 149 aa3.79□□□□□ -1.8
PTPRE-209ENST00000487428 ORMDL1Q9P0S3 153 aa3.79□□□□□ -1.8
PTPRE-209ENST00000487428 NDUFV3P56181 108 aaKnown RBP3.78□□□□□ -1.8
PTPRE-209ENST00000487428 C9orf118A6NHY6 69 aa3.77□□□□□ -1.81
PTPRE-209ENST00000487428 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
PTPRE-209ENST00000487428 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
PTPRE-209ENST00000487428 IGFL1Q6UW32 110 aa3.77□□□□□ -1.81
PTPRE-209ENST00000487428 VPS25Q9BRG1 176 aa3.77□□□□□ -1.81
PTPRE-209ENST00000487428 A0A1B0GW54 56 aa3.76□□□□□ -1.81
PTPRE-209ENST00000487428 TAX1BP3O14907 124 aa3.76□□□□□ -1.81
PTPRE-209ENST00000487428 SCGB1C2P0DMR2 95 aa3.76□□□□□ -1.81
PTPRE-209ENST00000487428 TEN1Q86WV5 123 aa3.76□□□□□ -1.81
PTPRE-209ENST00000487428 MTURNQ8N3F0 131 aa3.76□□□□□ -1.81
PTPRE-209ENST00000487428 LRP2P98164 4655 aa3.76□□□□□ -1.81
PTPRE-209ENST00000487428 TRBV7-7A0A0K0K1E9 115 aa3.75□□□□□ -1.81
PTPRE-209ENST00000487428 A0A1B0GV72 72 aa3.75□□□□□ -1.81
PTPRE-209ENST00000487428 H3BMG7 143 aa3.75□□□□□ -1.81
PTPRE-209ENST00000487428 TCL1BO95988 128 aa3.75□□□□□ -1.81
PTPRE-209ENST00000487428 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
PTPRE-209ENST00000487428 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
PTPRE-209ENST00000487428 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
PTPRE-209ENST00000487428 JMJD7-PLA2G4BH0Y9G9 81 aa3.74□□□□□ -1.81
PTPRE-209ENST00000487428 SS18L2Q9UHA2 77 aa3.74□□□□□ -1.81
PTPRE-209ENST00000487428 H3BUT2 72 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 BAALC-AS2P0C853 105 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 FABP2P12104 132 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 PDE6GP18545 87 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 PRR4Q16378 134 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 OBSCN-AS1Q96MR7 158 aa3.73□□□□□ -1.81
PTPRE-209ENST00000487428 H3BT86 120 aa3.72□□□□□ -1.81
PTPRE-209ENST00000487428 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
PTPRE-209ENST00000487428 BATFQ16520 125 aa3.72□□□□□ -1.81
PTPRE-209ENST00000487428 C1orf195Q5TG92 126 aa3.72□□□□□ -1.81
PTPRE-209ENST00000487428 ANKRD29Q8N6D5 301 aa3.72□□□□□ -1.81
PTPRE-209ENST00000487428 LOC110117498A0A087WWA1 95 aa3.71□□□□□ -1.82
PTPRE-209ENST00000487428 RETNLBQ9BQ08 111 aa3.71□□□□□ -1.82
PTPRE-209ENST00000487428 A0A1W2PNM2 257 aa3.7□□□□□ -1.82
PTPRE-209ENST00000487428 GTF2H5Q6ZYL4 71 aa3.7□□□□□ -1.82
PTPRE-209ENST00000487428 NAA38Q9BRA0 125 aaKnown RBP3.7□□□□□ -1.82
PTPRE-209ENST00000487428 LPAP08519 4548 aa3.7□□□□□ -1.82
PTPRE-209ENST00000487428 A0A0G2JQZ4 141 aa3.69□□□□□ -1.82
PTPRE-209ENST00000487428 J3QR89 54 aa3.69□□□□□ -1.82
PTPRE-209ENST00000487428 DSCR8Q96T75 97 aa3.69□□□□□ -1.82
PTPRE-209ENST00000487428 C9JAW5 83 aa3.68□□□□□ -1.82
PTPRE-209ENST00000487428 CCKP06307 115 aa3.68□□□□□ -1.82
PTPRE-209ENST00000487428 XP32Q5T750 250 aa3.68□□□□□ -1.82
PTPRE-209ENST00000487428 HRCT1Q6UXD1 115 aa3.68□□□□□ -1.82
PTPRE-209ENST00000487428 Q6ZQT0 140 aa3.68□□□□□ -1.82
PTPRE-209ENST00000487428 A0A087WSZ3 146 aa3.67□□□□□ -1.82
PTPRE-209ENST00000487428 Q96NJ1 140 aa3.67□□□□□ -1.82
PTPRE-209ENST00000487428 CDIP1Q9H305 208 aa3.67□□□□□ -1.82
PTPRE-209ENST00000487428 SPCS1Q9Y6A9 102 aa3.67□□□□□ -1.82
PTPRE-209ENST00000487428 K7EP34 96 aa3.66□□□□□ -1.82
PTPRE-209ENST00000487428 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
PTPRE-209ENST00000487428 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
PTPRE-209ENST00000487428 F8W1H4 67 aa3.64□□□□□ -1.83
PTPRE-209ENST00000487428 SMCPP49901 116 aaPredicted RBP3.64□□□□□ -1.83
PTPRE-209ENST00000487428 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
PTPRE-209ENST00000487428 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
PTPRE-209ENST00000487428 J3KT08 172 aa3.63□□□□□ -1.83
PTPRE-209ENST00000487428 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
PTPRE-209ENST00000487428 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
PTPRE-209ENST00000487428 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
PTPRE-209ENST00000487428 Q75L30 129 aa3.61□□□□□ -1.83
PTPRE-209ENST00000487428 RPL37P61927 97 aaKnown RBP3.6□□□□□ -1.83
PTPRE-209ENST00000487428 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms