RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 SPRR1AP35321 89 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 PRLHP81277 87 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 DIRC1Q969H9 104 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 SPANXB1Q9NS25 103 aaPredicted RBP3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 DLEU1O43261 78 aa3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 IFITM1P13164 125 aa3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 RPL28P46779 137 aaKnown RBP3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 UBE2AP49459 152 aa3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 SPATA45Q537H7 98 aa3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 Q6ZVH6 145 aa3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
RTFDC1-209ENST00000487211 S100A7L2Q5SY68 101 aa3.63□□□□□ -1.83
RTFDC1-209ENST00000487211 OR13C6PQ8NH95 151 aa3.63□□□□□ -1.83
RTFDC1-209ENST00000487211 VAMP8Q9BV40 100 aa3.63□□□□□ -1.83
RTFDC1-209ENST00000487211 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
RTFDC1-209ENST00000487211 C2orf91Q6ZV80 131 aa3.62□□□□□ -1.83
RTFDC1-209ENST00000487211 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
RTFDC1-209ENST00000487211 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
RTFDC1-209ENST00000487211 TRAV23DV6A0A075B6W5 121 aa3.61□□□□□ -1.83
RTFDC1-209ENST00000487211 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
RTFDC1-209ENST00000487211 ERC2-IT1O76042 136 aa3.61□□□□□ -1.83
RTFDC1-209ENST00000487211 SLC25A34Q6PIV7 304 aa3.61□□□□□ -1.83
RTFDC1-209ENST00000487211 Q9BRP9 147 aa3.61□□□□□ -1.83
RTFDC1-209ENST00000487211 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
RTFDC1-209ENST00000487211 ETDCA0A1B0GVM5 59 aa3.6□□□□□ -1.83
RTFDC1-209ENST00000487211 A6NDN8 102 aa3.6□□□□□ -1.83
RTFDC1-209ENST00000487211 COPS9Q8WXC6 57 aa3.6□□□□□ -1.83
RTFDC1-209ENST00000487211 HIGD1BQ9P298 99 aa3.6□□□□□ -1.83
RTFDC1-209ENST00000487211 NEBP20929 6669 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 TRAV13-2A0A0B4J235 113 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 LOC105371267A0A1B0GV96 52 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 S100A12P80511 92 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 Q6ZRX8 168 aa3.59□□□□□ -1.83
RTFDC1-209ENST00000487211 C6orf99Q4VX62 202 aa3.58□□□□□ -1.84
RTFDC1-209ENST00000487211 SMIM11BQ8TCY0 68 aa3.58□□□□□ -1.84
RTFDC1-209ENST00000487211 SPRR4Q96PI1 79 aa3.58□□□□□ -1.84
RTFDC1-209ENST00000487211 C12orf57Q99622 126 aa3.58□□□□□ -1.84
RTFDC1-209ENST00000487211 CRYGAP11844 174 aa3.57□□□□□ -1.84
RTFDC1-209ENST00000487211 HINT1P49773 126 aaPredicted RBP3.57□□□□□ -1.84
RTFDC1-209ENST00000487211 ST20-AS1Q8NBB2 130 aa3.57□□□□□ -1.84
RTFDC1-209ENST00000487211 CBY1Q9Y3M2 126 aa3.57□□□□□ -1.84
RTFDC1-209ENST00000487211 TRBV7-6A0A0J9YX20 115 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 COX7BP24311 80 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 FXYD2P54710 66 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 TAL2Q16559 108 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 FAM229BQ4G0N7 80 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 C3orf22Q8N5N4 141 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 PRO1933Q9H354 126 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 UQCR10Q9UDW1 63 aa3.56□□□□□ -1.84
RTFDC1-209ENST00000487211 CTAG1AP78358 180 aa3.55□□□□□ -1.84
RTFDC1-209ENST00000487211 LINC00483Q53H64 154 aa3.55□□□□□ -1.84
RTFDC1-209ENST00000487211 LPAP08519 4548 aa3.54□□□□□ -1.84
RTFDC1-209ENST00000487211 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
RTFDC1-209ENST00000487211 A0A0B4J2C4 111 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 H7C2G1 150 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 TSPAN13O95857 204 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 SMIM6P0DI80 62 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 HSD52Q0P140 79 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 LINC00575Q6W349 94 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 RAB37Q96AX2 223 aa3.53□□□□□ -1.84
RTFDC1-209ENST00000487211 SPRR1BP22528 89 aa3.52□□□□□ -1.85
RTFDC1-209ENST00000487211 VAMP3Q15836 100 aa3.52□□□□□ -1.85
RTFDC1-209ENST00000487211 BVES-AS1Q5T3Y7 98 aa3.52□□□□□ -1.85
RTFDC1-209ENST00000487211 DEFB105AQ8NG35 78 aa3.52□□□□□ -1.85
RTFDC1-209ENST00000487211 PRO1854Q9UHT4 67 aa3.52□□□□□ -1.85
RTFDC1-209ENST00000487211 hADV29S1A0JD25 119 aa3.51□□□□□ -1.85
RTFDC1-209ENST00000487211 K7ERJ3 54 aa3.51□□□□□ -1.85
RTFDC1-209ENST00000487211 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
RTFDC1-209ENST00000487211 NHP2Q9NX24 153 aaKnown RBP3.51□□□□□ -1.85
RTFDC1-209ENST00000487211 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
RTFDC1-209ENST00000487211 IGLV5-48A0A075B6I7 105 aa3.5□□□□□ -1.85
RTFDC1-209ENST00000487211 TEX49A0A1B0GTD5 131 aa3.5□□□□□ -1.85
RTFDC1-209ENST00000487211 MOBPQ13875 183 aa3.5□□□□□ -1.85
RTFDC1-209ENST00000487211 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
RTFDC1-209ENST00000487211 LINC00304Q8N9R0 145 aa3.5□□□□□ -1.85
RTFDC1-209ENST00000487211 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
RTFDC1-209ENST00000487211 H0YGX0 51 aa3.49□□□□□ -1.85
RTFDC1-209ENST00000487211 SLC25A20O43772 301 aa3.49□□□□□ -1.85
RTFDC1-209ENST00000487211 Q6ZQY7 126 aa3.49□□□□□ -1.85
RTFDC1-209ENST00000487211 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
RTFDC1-209ENST00000487211 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
RTFDC1-209ENST00000487211 LAMTOR3Q9UHA4 124 aa3.48□□□□□ -1.85
RTFDC1-209ENST00000487211 TSTD3H0UI37 97 aa3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 SPAG11AQ6PDA7 123 aa3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 CLEC2BQ92478 149 aa3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 USH2AO75445 5202 aa3.47□□□□□ -1.85
RTFDC1-209ENST00000487211 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
RTFDC1-209ENST00000487211 SPINK1P00995 79 aa3.46□□□□□ -1.86
RTFDC1-209ENST00000487211 PSMB2P49721 201 aa3.46□□□□□ -1.86
RTFDC1-209ENST00000487211 HRCT1Q6UXD1 115 aa3.46□□□□□ -1.86
RTFDC1-209ENST00000487211 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
RTFDC1-209ENST00000487211 M0R143 59 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms