RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 LINC00959A0A1B0GUT2 108 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 A0A1B0GX51 115 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 M0QY20 66 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 M0R2T5 61 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 MGPP08493 103 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 RPL35P42766 123 aaKnown RBP1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 SPANXN1Q5VSR9 72 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 CHCHD1Q96BP2 118 aaKnown RBP1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 AP1S3Q96PC3 154 aa1.65□□□□□ -2.15
PRPF38A-203ENST00000487160 TRBV7-6A0A0J9YX20 115 aa1.64□□□□□ -2.15
PRPF38A-203ENST00000487160 GCHFRP30047 84 aa1.64□□□□□ -2.15
PRPF38A-203ENST00000487160 SFT2D1Q8WV19 159 aa1.64□□□□□ -2.15
PRPF38A-203ENST00000487160 SMIM3Q9BZL3 60 aa1.64□□□□□ -2.15
PRPF38A-203ENST00000487160 V9GYH0 126 aa1.64□□□□□ -2.15
PRPF38A-203ENST00000487160 A0A087WSZ3 146 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 NAP1L6A6NFF2 107 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 J3KT08 172 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 NUPR1O60356 82 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 FABP2P12104 132 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 ZNF25P17030 456 aaPredicted RBP1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 UBE2G1P62253 170 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 SPAG11BQ08648 103 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 ZFP30Q9Y2G7 519 aa1.63□□□□□ -2.15
PRPF38A-203ENST00000487160 FLGP20930 4061 aaPredicted RBP1.62□□□□□ -2.15
PRPF38A-203ENST00000487160 TMEM167BQ9NRX6 74 aa1.62□□□□□ -2.15
PRPF38A-203ENST00000487160 MRPL35Q9NZE8 188 aaKnown RBP1.62□□□□□ -2.15
PRPF38A-203ENST00000487160 C6orf48Q9UBA6 75 aa1.62□□□□□ -2.15
PRPF38A-203ENST00000487160 UBE2D4Q9Y2X8 147 aa1.62□□□□□ -2.15
PRPF38A-203ENST00000487160 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
PRPF38A-203ENST00000487160 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 IGKV3D-7A0A0C4DH55 119 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 TRBV27A0A0K0K1C4 114 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 NDUFA1O15239 70 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 BCE1O60756 84 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 SIX6O95475 246 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 NCR2O95944 276 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 FOXA3P55318 350 aaPredicted RBP1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 UNQ6190/PRO20217Q6UXQ8 127 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 C5orf38Q86SI9 138 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 RPL39LQ96EH5 51 aaKnown RBP1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 CDC42SE2Q9NRR3 84 aa1.61□□□□□ -2.15
PRPF38A-203ENST00000487160 TRAV13-1A0A0B4J241 112 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 H3BMG7 143 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 IGLC6P0CF74 106 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 COX6B2Q6YFQ2 88 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 C22orf24Q9Y442 160 aa1.6□□□□□ -2.15
PRPF38A-203ENST00000487160 CCDC160A6NGH7 325 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 C9JAW5 83 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 I3L3M4 83 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 IL7P13232 177 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 SPAG11AQ6PDA7 123 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 C2orf82Q6UX34 121 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 PPP1R1CQ8WVI7 109 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 RAB37Q96AX2 223 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 PSMG3Q9BT73 122 aaPredicted RBP1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 MED9Q9NWA0 146 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 TMEM242Q9NWH2 141 aa1.59□□□□□ -2.15
PRPF38A-203ENST00000487160 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 CTXND1A0A1B0GTU2 59 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 C7orf77A4D0Y5 90 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 LYRM1O43325 122 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 MPC2O95563 127 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 PRLHP81277 87 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 SERF2P84101 59 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 Q6ZUT4 128 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 BAGE2Q86Y30 109 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 TMEM254Q8TBM7 123 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 TCEAL7Q9BRU2 100 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 NDUFA12Q9UI09 145 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 TNFSF18Q9UNG2 199 aa1.58□□□□□ -2.16
PRPF38A-203ENST00000487160 hDV103S1A0JD37 113 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 ZNF727A8MUV8 499 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 F2Z2F3 143 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 MT-ND4LP03901 98 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 NDUFA6P56556 154 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 CKS1BP61024 79 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 S100A12P80511 92 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 FAM19A2Q8N3H0 131 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 PRELID3AQ96N28 172 aa1.57□□□□□ -2.16
PRPF38A-203ENST00000487160 BORCS7-ASMTA0A0B4J1R7 106 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 SPINK1P00995 79 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 MRPS36P82909 103 aaKnown RBP1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 TEX261Q6UWH6 196 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 C9orf62Q8N4C0 152 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 BRK1Q8WUW1 75 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 ST20Q9HBF5 79 aa1.56□□□□□ -2.16
PRPF38A-203ENST00000487160 C9orf92A6NGG3 77 aa1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 FABP4P15090 132 aa1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 FCER1GP30273 86 aa1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 POLR2KP53803 58 aaKnown RBP1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 RPL39P62891 51 aaKnown RBP1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 RPL7L1Q6DKI1 246 aaKnown RBP1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 SPRR4Q96PI1 79 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms