RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SPRR1AP35321 89 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 KRTAP26-1Q6PEX3 210 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 LINC00472Q9H8W2 130 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 U3KQA8 63 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 ALMS1Q8TCU4 4167 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 TECTAO75443 2155 aa1.15□□□□□ -2.22
SNRNP27-204ENST00000487029 ABCA1O95477 2261 aa1.15□□□□□ -2.23
SNRNP27-204ENST00000487029 WNK2Q9Y3S1 2297 aa1.15□□□□□ -2.23
SNRNP27-204ENST00000487029 PCNTO95613 3336 aa1.15□□□□□ -2.23
SNRNP27-204ENST00000487029 AHCTF1Q8WYP5 2266 aa1.14□□□□□ -2.23
SNRNP27-204ENST00000487029 PLCE1Q9P212 2302 aa1.14□□□□□ -2.23
SNRNP27-204ENST00000487029 SDK1Q7Z5N4 2213 aa1.14□□□□□ -2.23
SNRNP27-204ENST00000487029 SPART-AS1P0CW21 52 aa1.14□□□□□ -2.23
SNRNP27-204ENST00000487029 SPRR1BP22528 89 aa1.14□□□□□ -2.23
SNRNP27-204ENST00000487029 CEP350Q5VT06 3117 aa1.14□□□□□ -2.23
SNRNP27-204ENST00000487029 ZFHX2Q9C0A1 2572 aaPredicted RBP1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 MGAQ8IWI9 3026 aa1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 SPTBN1Q01082 2364 aaKnown RBP1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 A0A087WTM6 91 aa1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 H3BNG1 76 aa1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 Q96NJ1 140 aa1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 GOLGB1Q14789 3259 aaKnown RBP1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 TNRC18O15417 2968 aaPredicted RBP1.13□□□□□ -2.23
SNRNP27-204ENST00000487029 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 A0A096LPF7 62 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 NBDYA0A0U1RRE5 68 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 RPL37P61927 97 aaKnown RBP1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 PRLHP81277 87 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 DEFB136Q30KP8 78 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 H1FX-AS1Q4G0G2 97 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 DNAH12Q6ZR08 3092 aa1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 MAP1BP46821 2468 aaKnown RBP1.12□□□□□ -2.23
SNRNP27-204ENST00000487029 CACNA1BQ00975 2339 aa1.11□□□□□ -2.23
SNRNP27-204ENST00000487029 CACNA1EQ15878 2313 aa1.11□□□□□ -2.23
SNRNP27-204ENST00000487029 SRCAPQ6ZRS2 3230 aa1.11□□□□□ -2.23
SNRNP27-204ENST00000487029 FAM186AA6NE01 2351 aa1.11□□□□□ -2.23
SNRNP27-204ENST00000487029 SPTBN2O15020 2390 aa1.11□□□□□ -2.23
SNRNP27-204ENST00000487029 ZZEF1O43149 2961 aa1.11□□□□□ -2.23
SNRNP27-204ENST00000487029 CEP250Q9BV73 2442 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 WNK1Q9H4A3 2382 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 SPINK1P00995 79 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 HTN3P15516 51 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 LINC01556Q5JQF7 62 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 UBE2DNLQ8IWF7 75 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 PLAC4Q8WY50 150 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 UTRNP46939 3433 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 RP1L1Q8IWN7 2480 aaPredicted RBP1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 CENPFP49454 3210 aa1.1□□□□□ -2.23
SNRNP27-204ENST00000487029 COL6A3P12111 3177 aa1.09□□□□□ -2.23
SNRNP27-204ENST00000487029 CHD6Q8TD26 2715 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 A0A096LNI7 61 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 H0YAA0 97 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 SPINK6Q6UWN8 80 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 CNOT1A5YKK6 2376 aaKnown RBP1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 NBEAQ8NFP9 2946 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 PKDREJQ9NTG1 2253 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 CHD7Q9P2D1 2997 aa1.08□□□□□ -2.24
SNRNP27-204ENST00000487029 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 SPTBN5Q9NRC6 3674 aaKnown RBP1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 INE1O15225 51 aa1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 MAP1AP78559 2803 aaPredicted RBP1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 APC2O95996 2303 aa1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 ANKRD17O75179 2603 aaKnown RBP1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 AKAP13Q12802 2813 aa1.07□□□□□ -2.24
SNRNP27-204ENST00000487029 AKAP6Q13023 2319 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 KALRNO60229 2985 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 DEFB135Q30KP9 77 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 C10orf99Q6UWK7 81 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 DEFB124Q8NES8 71 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 APLNQ9ULZ1 77 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 FRYLO94915 3013 aa1.06□□□□□ -2.24
SNRNP27-204ENST00000487029 ACACAQ13085 2346 aa1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 CFAP54Q96N23 3096 aa1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 TENM2Q9NT68 2774 aa1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 SPTA1P02549 2419 aa1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 EP300Q09472 2414 aaPredicted RBP1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 TRANK1O15050 2925 aa1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 FRYQ5TBA9 3013 aa1.05□□□□□ -2.24
SNRNP27-204ENST00000487029 PRUNE2Q8WUY3 3088 aa1.04□□□□□ -2.24
SNRNP27-204ENST00000487029 VPS13AQ96RL7 3174 aa1.04□□□□□ -2.24
SNRNP27-204ENST00000487029 RANBP2P49792 3224 aaKnown RBP1.04□□□□□ -2.24
SNRNP27-204ENST00000487029 K7EIL1 84 aa1.04□□□□□ -2.24
SNRNP27-204ENST00000487029 TACC2O95359 2948 aa1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 ROS1P08922 2347 aa1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 ZDBF2Q9HCK1 2354 aa1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 DEFB4AO15263 64 aa1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 TRIOO75962 3097 aa1.03□□□□□ -2.24
SNRNP27-204ENST00000487029 PTPRZ1P23471 2315 aaPredicted RBP1.03□□□□□ -2.25
SNRNP27-204ENST00000487029 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.03□□□□□ -2.25
SNRNP27-204ENST00000487029 CACNA1HO95180 2353 aa1.03□□□□□ -2.25
SNRNP27-204ENST00000487029 ANKHD1Q8IWZ3 2542 aaKnown RBP1.03□□□□□ -2.25
SNRNP27-204ENST00000487029 NCOR2Q9Y618 2525 aa1.03□□□□□ -2.25
SNRNP27-204ENST00000487029 SPTBN4Q9H254 2564 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 CELSR2Q9HCU4 2923 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 DMDP11532 3685 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
SNRNP27-204ENST00000487029 UNC80Q8N2C7 3258 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms