RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
LINC00996-202ENST00000486954 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
LINC00996-202ENST00000486954 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
LINC00996-202ENST00000486954 PPDPFLQ8WWR9 84 aa6.81□□□□□ -1.32
LINC00996-202ENST00000486954 Q8N377 158 aa6.8□□□□□ -1.32
LINC00996-202ENST00000486954 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
LINC00996-202ENST00000486954 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
LINC00996-202ENST00000486954 LYRM7Q5U5X0 104 aa6.78□□□□□ -1.32
LINC00996-202ENST00000486954 SNHG12Q9BXW3 62 aa6.78□□□□□ -1.32
LINC00996-202ENST00000486954 SPINK1P00995 79 aa6.77□□□□□ -1.33
LINC00996-202ENST00000486954 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
LINC00996-202ENST00000486954 H3BQ85 93 aa6.76□□□□□ -1.33
LINC00996-202ENST00000486954 ORMDL1Q9P0S3 153 aa6.76□□□□□ -1.33
LINC00996-202ENST00000486954 LST1O00453 97 aa6.74□□□□□ -1.33
LINC00996-202ENST00000486954 TRACP01848 142 aa6.74□□□□□ -1.33
LINC00996-202ENST00000486954 FABP2P12104 132 aa6.74□□□□□ -1.33
LINC00996-202ENST00000486954 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
LINC00996-202ENST00000486954 PRR4Q16378 134 aa6.73□□□□□ -1.33
LINC00996-202ENST00000486954 Q6JHZ5 121 aa6.73□□□□□ -1.33
LINC00996-202ENST00000486954 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
LINC00996-202ENST00000486954 LIMD2Q9BT23 127 aa6.73□□□□□ -1.33
LINC00996-202ENST00000486954 HERC1Q15751 4861 aa6.73□□□□□ -1.33
LINC00996-202ENST00000486954 ATXN8Q156A1 80 aa6.72□□□□□ -1.33
LINC00996-202ENST00000486954 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
LINC00996-202ENST00000486954 PCP4L1A6NKN8 68 aa6.71□□□□□ -1.34
LINC00996-202ENST00000486954 H3BUT2 72 aa6.71□□□□□ -1.34
LINC00996-202ENST00000486954 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.34
LINC00996-202ENST00000486954 NDUFV3P56181 108 aaKnown RBP6.71□□□□□ -1.34
LINC00996-202ENST00000486954 CD164Q04900 197 aa6.71□□□□□ -1.34
LINC00996-202ENST00000486954 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
LINC00996-202ENST00000486954 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
LINC00996-202ENST00000486954 TRBV20-1A0A075B6N2 111 aa6.68□□□□□ -1.34
LINC00996-202ENST00000486954 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
LINC00996-202ENST00000486954 H3BMG7 143 aa6.68□□□□□ -1.34
LINC00996-202ENST00000486954 TCL1BO95988 128 aa6.68□□□□□ -1.34
LINC00996-202ENST00000486954 TAX1BP3O14907 124 aa6.67□□□□□ -1.34
LINC00996-202ENST00000486954 COL5A1-AS1Q5SY13 56 aa6.67□□□□□ -1.34
LINC00996-202ENST00000486954 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
LINC00996-202ENST00000486954 A0A0G2JQZ4 141 aa6.66□□□□□ -1.34
LINC00996-202ENST00000486954 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
LINC00996-202ENST00000486954 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
LINC00996-202ENST00000486954 A0A1W2PPM0 123 aa6.65□□□□□ -1.34
LINC00996-202ENST00000486954 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
LINC00996-202ENST00000486954 A0A1B0GV72 72 aa6.64□□□□□ -1.35
LINC00996-202ENST00000486954 BAALC-AS2P0C853 105 aa6.64□□□□□ -1.35
LINC00996-202ENST00000486954 ANKRD29Q8N6D5 301 aa6.63□□□□□ -1.35
LINC00996-202ENST00000486954 HMCN2Q8NDA2 5059 aa6.62□□□□□ -1.35
LINC00996-202ENST00000486954 TRBV7-7A0A0K0K1E9 115 aa6.62□□□□□ -1.35
LINC00996-202ENST00000486954 Q5XG85 94 aa6.62□□□□□ -1.35
LINC00996-202ENST00000486954 C9JAW5 83 aa6.61□□□□□ -1.35
LINC00996-202ENST00000486954 TEN1Q86WV5 123 aa6.61□□□□□ -1.35
LINC00996-202ENST00000486954 SS18L2Q9UHA2 77 aa6.61□□□□□ -1.35
LINC00996-202ENST00000486954 RBM3P98179 157 aaKnown RBP6.6□□□□□ -1.35
LINC00996-202ENST00000486954 Q6Q795 121 aa6.6□□□□□ -1.35
LINC00996-202ENST00000486954 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
LINC00996-202ENST00000486954 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
LINC00996-202ENST00000486954 JMJD7-PLA2G4BH0Y9G9 81 aa6.58□□□□□ -1.36
LINC00996-202ENST00000486954 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
LINC00996-202ENST00000486954 H3BT86 120 aa6.57□□□□□ -1.36
LINC00996-202ENST00000486954 A0A087WSZ3 146 aa6.56□□□□□ -1.36
LINC00996-202ENST00000486954 CCKP06307 115 aa6.56□□□□□ -1.36
LINC00996-202ENST00000486954 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
LINC00996-202ENST00000486954 TRBV7-4A0A0J9YYF1 115 aa6.55□□□□□ -1.36
LINC00996-202ENST00000486954 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
LINC00996-202ENST00000486954 VPS25Q9BRG1 176 aa6.55□□□□□ -1.36
LINC00996-202ENST00000486954 A0A1W2PNM2 257 aa6.54□□□□□ -1.36
LINC00996-202ENST00000486954 C1orf195Q5TG92 126 aa6.54□□□□□ -1.36
LINC00996-202ENST00000486954 K7EP34 96 aa6.53□□□□□ -1.36
LINC00996-202ENST00000486954 C21orf62-AS1Q17RA5 79 aa6.53□□□□□ -1.36
LINC00996-202ENST00000486954 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
LINC00996-202ENST00000486954 MTURNQ8N3F0 131 aa6.53□□□□□ -1.36
LINC00996-202ENST00000486954 PDE6GP18545 87 aa6.52□□□□□ -1.37
LINC00996-202ENST00000486954 KRTAP13-3Q3SY46 172 aa6.51□□□□□ -1.37
LINC00996-202ENST00000486954 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
LINC00996-202ENST00000486954 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
LINC00996-202ENST00000486954 Q6ZQT0 140 aa6.48□□□□□ -1.37
LINC00996-202ENST00000486954 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
LINC00996-202ENST00000486954 LRP2P98164 4655 aa6.46□□□□□ -1.37
LINC00996-202ENST00000486954 A0A1B0GW54 56 aa6.46□□□□□ -1.38
LINC00996-202ENST00000486954 C9orf92A6NGG3 77 aa6.46□□□□□ -1.38
LINC00996-202ENST00000486954 SIGMAR1Q99720 223 aa6.46□□□□□ -1.38
LINC00996-202ENST00000486954 LPAP08519 4548 aa6.45□□□□□ -1.38
LINC00996-202ENST00000486954 IGKV4-1P06312 121 aa6.43□□□□□ -1.38
LINC00996-202ENST00000486954 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
LINC00996-202ENST00000486954 XP32Q5T750 250 aa6.42□□□□□ -1.38
LINC00996-202ENST00000486954 Q96NJ1 140 aa6.42□□□□□ -1.38
LINC00996-202ENST00000486954 PRO0461Q9UI25 63 aa6.42□□□□□ -1.38
LINC00996-202ENST00000486954 F8W1H4 67 aa6.41□□□□□ -1.38
LINC00996-202ENST00000486954 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
LINC00996-202ENST00000486954 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
LINC00996-202ENST00000486954 J3KT08 172 aa6.39□□□□□ -1.39
LINC00996-202ENST00000486954 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
LINC00996-202ENST00000486954 NREPQ16612 68 aa6.38□□□□□ -1.39
LINC00996-202ENST00000486954 DEFB116Q30KQ4 102 aa6.38□□□□□ -1.39
LINC00996-202ENST00000486954 NDUFB1O75438 58 aa6.35□□□□□ -1.39
LINC00996-202ENST00000486954 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
LINC00996-202ENST00000486954 LINC00313P59037 77 aa6.34□□□□□ -1.39
LINC00996-202ENST00000486954 ETDBQ3ZM63 59 aa6.34□□□□□ -1.39
LINC00996-202ENST00000486954 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
LINC00996-202ENST00000486954 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms