RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 HIGD1BQ9P298 99 aa3.24□□□□□ -1.89
CUX1-208ENST00000485792 TRAV13-2A0A0B4J235 113 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 A0A1B0GWB2 263 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 GAGE2AQ6NT46 116 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 C2orf91Q6ZV80 131 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 Q8NBF4 154 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
CUX1-208ENST00000485792 A0A0G2JQZ4 141 aa3.22□□□□□ -1.89
CUX1-208ENST00000485792 HSBP1L1C9JCN9 74 aa3.22□□□□□ -1.89
CUX1-208ENST00000485792 TSPAN13O95857 204 aa3.22□□□□□ -1.89
CUX1-208ENST00000485792 COX7BP24311 80 aa3.22□□□□□ -1.89
CUX1-208ENST00000485792 HINT1P49773 126 aaPredicted RBP3.22□□□□□ -1.89
CUX1-208ENST00000485792 PYY3Q5JQD4 70 aa3.22□□□□□ -1.89
CUX1-208ENST00000485792 FP248Q71RG6 208 aaPredicted RBP3.22□□□□□ -1.89
CUX1-208ENST00000485792 Q8N377 158 aa3.22□□□□□ -1.89
CUX1-208ENST00000485792 Q5XG85 94 aa3.21□□□□□ -1.9
CUX1-208ENST00000485792 OR13C6PQ8NH95 151 aa3.21□□□□□ -1.9
CUX1-208ENST00000485792 TEX49A0A1B0GTD5 131 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 CFC1BP0CG36 223 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 CFC1P0CG37 223 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 CD164Q04900 197 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 MOBPQ13875 183 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 PRR4Q16378 134 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 TAL2Q16559 108 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 LINC00575Q6W349 94 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 C14orf144Q96I85 54 aa3.2□□□□□ -1.9
CUX1-208ENST00000485792 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
CUX1-208ENST00000485792 A0A0B4J2C4 111 aa3.19□□□□□ -1.9
CUX1-208ENST00000485792 A6NDN8 102 aa3.19□□□□□ -1.9
CUX1-208ENST00000485792 SPATA45Q537H7 98 aa3.19□□□□□ -1.9
CUX1-208ENST00000485792 SLC25A34Q6PIV7 304 aa3.19□□□□□ -1.9
CUX1-208ENST00000485792 PAM16Q9Y3D7 125 aa3.19□□□□□ -1.9
CUX1-208ENST00000485792 IGLV7-46A0A075B6I9 117 aa3.18□□□□□ -1.9
CUX1-208ENST00000485792 IGLV9-49A0A0B4J1Y8 123 aa3.18□□□□□ -1.9
CUX1-208ENST00000485792 C12orf57Q99622 126 aa3.18□□□□□ -1.9
CUX1-208ENST00000485792 VAMP8Q9BV40 100 aa3.18□□□□□ -1.9
CUX1-208ENST00000485792 SLC25A20O43772 301 aa3.17□□□□□ -1.9
CUX1-208ENST00000485792 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
CUX1-208ENST00000485792 PPDPFLQ8WWR9 84 aa3.17□□□□□ -1.9
CUX1-208ENST00000485792 HIST1H4GQ99525 98 aa3.17□□□□□ -1.9
CUX1-208ENST00000485792 NHP2Q9NX24 153 aaKnown RBP3.17□□□□□ -1.9
CUX1-208ENST00000485792 LAMTOR3Q9UHA4 124 aa3.17□□□□□ -1.9
CUX1-208ENST00000485792 hADV29S1A0JD25 119 aa3.16□□□□□ -1.9
CUX1-208ENST00000485792 VAMP3Q15836 100 aa3.16□□□□□ -1.9
CUX1-208ENST00000485792 BVES-AS1Q5T3Y7 98 aa3.16□□□□□ -1.9
CUX1-208ENST00000485792 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.16□□□□□ -1.9
CUX1-208ENST00000485792 CEND1Q8N111 149 aa3.16□□□□□ -1.9
CUX1-208ENST00000485792 FAM218AQ96MZ4 157 aa3.16□□□□□ -1.9
CUX1-208ENST00000485792 H0YGX0 51 aa3.15□□□□□ -1.91
CUX1-208ENST00000485792 FXYD2P54710 66 aa3.15□□□□□ -1.91
CUX1-208ENST00000485792 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.91
CUX1-208ENST00000485792 Q6ZQY7 126 aa3.15□□□□□ -1.91
CUX1-208ENST00000485792 PRO1933Q9H354 126 aa3.15□□□□□ -1.91
CUX1-208ENST00000485792 IGKV2D-30A0A075B6S6 120 aa3.14□□□□□ -1.91
CUX1-208ENST00000485792 A0A1B0GX51 115 aa3.14□□□□□ -1.91
CUX1-208ENST00000485792 Q1RN00 199 aa3.14□□□□□ -1.91
CUX1-208ENST00000485792 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
CUX1-208ENST00000485792 C9orf153Q5TBE3 101 aa3.14□□□□□ -1.91
CUX1-208ENST00000485792 PRO1854Q9UHT4 67 aa3.14□□□□□ -1.91
CUX1-208ENST00000485792 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
CUX1-208ENST00000485792 HSD52Q0P140 79 aa3.13□□□□□ -1.91
CUX1-208ENST00000485792 OCIAD2Q56VL3 154 aa3.13□□□□□ -1.91
CUX1-208ENST00000485792 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
CUX1-208ENST00000485792 Q6Q795 121 aa3.13□□□□□ -1.91
CUX1-208ENST00000485792 DEFB105AQ8NG35 78 aa3.13□□□□□ -1.91
CUX1-208ENST00000485792 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
CUX1-208ENST00000485792 K7ERJ3 54 aa3.12□□□□□ -1.91
CUX1-208ENST00000485792 Q6JHZ5 121 aa3.12□□□□□ -1.91
CUX1-208ENST00000485792 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
CUX1-208ENST00000485792 UQCR10Q9UDW1 63 aa3.12□□□□□ -1.91
CUX1-208ENST00000485792 H7C2G1 150 aa3.11□□□□□ -1.91
CUX1-208ENST00000485792 CLEC2BQ92478 149 aa3.11□□□□□ -1.91
CUX1-208ENST00000485792 RAB37Q96AX2 223 aa3.11□□□□□ -1.91
CUX1-208ENST00000485792 TRBV7-7A0A0K0K1E9 115 aa3.1□□□□□ -1.91
CUX1-208ENST00000485792 SEC61BP60468 96 aaKnown RBP3.1□□□□□ -1.91
CUX1-208ENST00000485792 HRCT1Q6UXD1 115 aa3.1□□□□□ -1.91
CUX1-208ENST00000485792 SMIM6P0DI80 62 aa3.08□□□□□ -1.92
CUX1-208ENST00000485792 NDUFV3P56181 108 aaKnown RBP3.08□□□□□ -1.92
CUX1-208ENST00000485792 LOC105371267A0A1B0GV96 52 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 F8WEM9 126 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 H3BQ85 93 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 H3BUT2 72 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 TCL1BO95988 128 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 TRACP01848 142 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 TEN1Q86WV5 123 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 Q96NJ1 140 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 SNHG12Q9BXW3 62 aa3.07□□□□□ -1.92
CUX1-208ENST00000485792 A0A1W2PNM2 257 aa3.06□□□□□ -1.92
CUX1-208ENST00000485792 LST1O00453 97 aa3.06□□□□□ -1.92
CUX1-208ENST00000485792 SNCGO76070 127 aa3.06□□□□□ -1.92
CUX1-208ENST00000485792 TRBV7-4A0A0J9YYF1 115 aa3.05□□□□□ -1.92
CUX1-208ENST00000485792 H3BMG7 143 aa3.05□□□□□ -1.92
CUX1-208ENST00000485792 TMEM256-PLSCR3K7ERE1 68 aa3.05□□□□□ -1.92
CUX1-208ENST00000485792 UBE2V1Q13404 147 aa3.05□□□□□ -1.92
CUX1-208ENST00000485792 A0A0U1RQV1 116 aa3.04□□□□□ -1.92
CUX1-208ENST00000485792 C9orf92A6NGG3 77 aa3.04□□□□□ -1.92
CUX1-208ENST00000485792 COX6CP09669 75 aa3.04□□□□□ -1.92
CUX1-208ENST00000485792 RPL37P61927 97 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms