RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 FAM229BQ4G0N7 80 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 LINC00483Q53H64 154 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 ZNF706Q9Y5V0 76 aaPredicted RBP5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
SHROOM3-207ENST00000485780 A0A087X002 238 aa5.52□□□□□ -1.53
SHROOM3-207ENST00000485780 H3BMG7 143 aa5.51□□□□□ -1.53
SHROOM3-207ENST00000485780 SPRR1BP22528 89 aa5.51□□□□□ -1.53
SHROOM3-207ENST00000485780 OCIAD2Q56VL3 154 aa5.51□□□□□ -1.53
SHROOM3-207ENST00000485780 LYRM7Q5U5X0 104 aa5.51□□□□□ -1.53
SHROOM3-207ENST00000485780 PRR26Q8N8Z3 221 aa5.51□□□□□ -1.53
SHROOM3-207ENST00000485780 CRYGAP11844 174 aa5.5□□□□□ -1.53
SHROOM3-207ENST00000485780 KRTAP13-2Q52LG2 175 aa5.5□□□□□ -1.53
SHROOM3-207ENST00000485780 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
SHROOM3-207ENST00000485780 IGLV5-48A0A075B6I7 105 aa5.49□□□□□ -1.53
SHROOM3-207ENST00000485780 TCL1BO95988 128 aa5.49□□□□□ -1.53
SHROOM3-207ENST00000485780 LRP2P98164 4655 aa5.49□□□□□ -1.53
SHROOM3-207ENST00000485780 ANAPC11Q9NYG5 84 aa5.49□□□□□ -1.53
SHROOM3-207ENST00000485780 H7C2G1 150 aa5.48□□□□□ -1.53
SHROOM3-207ENST00000485780 PSMB2P49721 201 aa5.48□□□□□ -1.53
SHROOM3-207ENST00000485780 LINC01547P58512 204 aaPredicted RBP5.48□□□□□ -1.53
SHROOM3-207ENST00000485780 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
SHROOM3-207ENST00000485780 H0YGX0 51 aa5.47□□□□□ -1.53
SHROOM3-207ENST00000485780 TRIAP1O43715 76 aa5.47□□□□□ -1.53
SHROOM3-207ENST00000485780 SCGB1C2P0DMR2 95 aa5.47□□□□□ -1.53
SHROOM3-207ENST00000485780 GAGE2AQ6NT46 116 aa5.47□□□□□ -1.53
SHROOM3-207ENST00000485780 hADV29S1A0JD25 119 aa5.46□□□□□ -1.54
SHROOM3-207ENST00000485780 K7ERU9 68 aa5.46□□□□□ -1.54
SHROOM3-207ENST00000485780 SLC25A20O43772 301 aa5.46□□□□□ -1.54
SHROOM3-207ENST00000485780 Q1RN00 199 aa5.46□□□□□ -1.54
SHROOM3-207ENST00000485780 FAM218AQ96MZ4 157 aa5.46□□□□□ -1.54
SHROOM3-207ENST00000485780 A0A1B0GX51 115 aa5.45□□□□□ -1.54
SHROOM3-207ENST00000485780 COX6CP09669 75 aa5.45□□□□□ -1.54
SHROOM3-207ENST00000485780 ATXN8Q156A1 80 aa5.45□□□□□ -1.54
SHROOM3-207ENST00000485780 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.45□□□□□ -1.54
SHROOM3-207ENST00000485780 C3orf22Q8N5N4 141 aa5.45□□□□□ -1.54
SHROOM3-207ENST00000485780 TEX49A0A1B0GTD5 131 aa5.44□□□□□ -1.54
SHROOM3-207ENST00000485780 Q6ZQY7 126 aa5.44□□□□□ -1.54
SHROOM3-207ENST00000485780 TYMSOSQ8TAI1 123 aa5.44□□□□□ -1.54
SHROOM3-207ENST00000485780 LST1O00453 97 aa5.43□□□□□ -1.54
SHROOM3-207ENST00000485780 ETDBQ3ZM63 59 aa5.43□□□□□ -1.54
SHROOM3-207ENST00000485780 SMIM29Q86T20 159 aa5.43□□□□□ -1.54
SHROOM3-207ENST00000485780 Q8N377 158 aa5.43□□□□□ -1.54
SHROOM3-207ENST00000485780 PPDPFLQ8WWR9 84 aa5.43□□□□□ -1.54
SHROOM3-207ENST00000485780 SSBP3-AS1Q7Z2R9 100 aa5.42□□□□□ -1.54
SHROOM3-207ENST00000485780 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
SHROOM3-207ENST00000485780 MOBPQ13875 183 aa5.41□□□□□ -1.54
SHROOM3-207ENST00000485780 TEN1Q86WV5 123 aa5.41□□□□□ -1.54
SHROOM3-207ENST00000485780 Q8NBF4 154 aa5.41□□□□□ -1.54
SHROOM3-207ENST00000485780 CLEC2BQ92478 149 aa5.41□□□□□ -1.54
SHROOM3-207ENST00000485780 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
SHROOM3-207ENST00000485780 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 C9JAW5 83 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 SNCGO76070 127 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 TRACP01848 142 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 ANKRD29Q8N6D5 301 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.54
SHROOM3-207ENST00000485780 LPAP08519 4548 aa5.4□□□□□ -1.55
SHROOM3-207ENST00000485780 IGLV8-61A0A075B6I0 122 aa5.39□□□□□ -1.55
SHROOM3-207ENST00000485780 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
SHROOM3-207ENST00000485780 DEFB105AQ8NG35 78 aa5.39□□□□□ -1.55
SHROOM3-207ENST00000485780 H3BT86 120 aa5.38□□□□□ -1.55
SHROOM3-207ENST00000485780 J3QR89 54 aa5.38□□□□□ -1.55
SHROOM3-207ENST00000485780 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
SHROOM3-207ENST00000485780 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
SHROOM3-207ENST00000485780 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
SHROOM3-207ENST00000485780 PRR4Q16378 134 aa5.37□□□□□ -1.55
SHROOM3-207ENST00000485780 C9orf153Q5TBE3 101 aa5.37□□□□□ -1.55
SHROOM3-207ENST00000485780 H3BQ85 93 aa5.36□□□□□ -1.55
SHROOM3-207ENST00000485780 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
SHROOM3-207ENST00000485780 DNAL4O96015 105 aa5.35□□□□□ -1.55
SHROOM3-207ENST00000485780 SPINK1P00995 79 aa5.35□□□□□ -1.55
SHROOM3-207ENST00000485780 CD164Q04900 197 aa5.35□□□□□ -1.55
SHROOM3-207ENST00000485780 VPS25Q9BRG1 176 aa5.35□□□□□ -1.55
SHROOM3-207ENST00000485780 ORMDL1Q9P0S3 153 aa5.35□□□□□ -1.55
SHROOM3-207ENST00000485780 F8WEM9 126 aa5.33□□□□□ -1.56
SHROOM3-207ENST00000485780 BAALC-AS2P0C853 105 aa5.33□□□□□ -1.56
SHROOM3-207ENST00000485780 Q6JHZ5 121 aa5.33□□□□□ -1.56
SHROOM3-207ENST00000485780 TMEM256-PLSCR3K7ERE1 68 aa5.32□□□□□ -1.56
SHROOM3-207ENST00000485780 NDUFV3P56181 108 aaKnown RBP5.32□□□□□ -1.56
SHROOM3-207ENST00000485780 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
SHROOM3-207ENST00000485780 Q5XG85 94 aa5.32□□□□□ -1.56
SHROOM3-207ENST00000485780 IGFL1Q6UW32 110 aa5.31□□□□□ -1.56
SHROOM3-207ENST00000485780 OBSCN-AS1Q96MR7 158 aa5.31□□□□□ -1.56
SHROOM3-207ENST00000485780 A0A0G2JQZ4 141 aa5.29□□□□□ -1.56
SHROOM3-207ENST00000485780 Q6Q795 121 aa5.29□□□□□ -1.56
SHROOM3-207ENST00000485780 SIGMAR1Q99720 223 aa5.29□□□□□ -1.56
SHROOM3-207ENST00000485780 FAM240AA0A1B0GVK7 77 aa5.28□□□□□ -1.56
SHROOM3-207ENST00000485780 LIMD2Q9BT23 127 aa5.28□□□□□ -1.56
SHROOM3-207ENST00000485780 FP248Q71RG6 208 aaPredicted RBP5.27□□□□□ -1.57
SHROOM3-207ENST00000485780 TRBV7-4A0A0J9YYF1 115 aa5.26□□□□□ -1.57
SHROOM3-207ENST00000485780 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
SHROOM3-207ENST00000485780 ACYP1P07311 99 aa5.26□□□□□ -1.57
SHROOM3-207ENST00000485780 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
SHROOM3-207ENST00000485780 SCGB1A1P11684 91 aa5.25□□□□□ -1.57
SHROOM3-207ENST00000485780 ASB16-AS1Q495Z4 193 aa5.25□□□□□ -1.57
SHROOM3-207ENST00000485780 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
SHROOM3-207ENST00000485780 A0A1W2PNM2 257 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms