RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
SMARCC1-206ENST00000485737 REG3GQ6UW15 175 aa2.95□□□□□ -1.94
SMARCC1-206ENST00000485737 IGFL1Q6UW32 110 aa2.95□□□□□ -1.94
SMARCC1-206ENST00000485737 FLNAP21333 2647 aaKnown RBP2.95□□□□□ -1.94
SMARCC1-206ENST00000485737 USP24Q9UPU5 2620 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 CENPEQ02224 2701 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 GCN1Q92616 2671 aaKnown RBP2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 SPRR1BP22528 89 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 SEC61GP60059 68 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 UBE2BP63146 152 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 B9D2Q9BPU9 175 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 RETNQ9HD89 108 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 FAM208BQ5VWN6 2430 aa2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 ZNF469Q96JG9 3925 aaPredicted RBP2.94□□□□□ -1.94
SMARCC1-206ENST00000485737 PDZD2O15018 2839 aa2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 DEFB131BA0A096LNP1 70 aa2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 PMAIP1Q13794 54 aa2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 Q5VV11 94 aa2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 C9orf163Q8N9P6 203 aa2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 SONP18583 2426 aaKnown RBP2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 FN1P02751 2386 aaKnown RBP2.93□□□□□ -1.94
SMARCC1-206ENST00000485737 A0A087WSZ3 146 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 A8MWP4 228 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 H0Y9J4 135 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 H0Y9P7 68 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 UBE2AP49459 152 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 ZFYVE26Q68DK2 2539 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 NF1P21359 2839 aa2.92□□□□□ -1.94
SMARCC1-206ENST00000485737 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 A8MUN3 132 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 PSPHP1O15172 72 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 CNBPP62633 177 aaKnown RBP2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 CASC10Q5T4H9 136 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 CASC2Q6XLA1 102 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 Q75L30 129 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 WFDC13Q8IUB5 93 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 C11orf45Q8TAV5 145 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 SMR3AQ99954 134 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 CUBNO60494 3623 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 CCDC168Q8NDH2 2452 aa2.91□□□□□ -1.94
SMARCC1-206ENST00000485737 NBEAL2Q6ZNJ1 2754 aa2.9□□□□□ -1.94
SMARCC1-206ENST00000485737 C16orf90A8MZG2 172 aa2.9□□□□□ -1.95
SMARCC1-206ENST00000485737 PRR4Q16378 134 aa2.9□□□□□ -1.95
SMARCC1-206ENST00000485737 ASB16-AS1Q495Z4 193 aa2.9□□□□□ -1.95
SMARCC1-206ENST00000485737 HIVEP1P15822 2718 aa2.9□□□□□ -1.95
SMARCC1-206ENST00000485737 IGLV7-46A0A075B6I9 117 aa2.89□□□□□ -1.95
SMARCC1-206ENST00000485737 MMP24-AS1A0A0U1RRL7 71 aa2.89□□□□□ -1.95
SMARCC1-206ENST00000485737 INAFM1C9JVW0 142 aa2.89□□□□□ -1.95
SMARCC1-206ENST00000485737 PRLHP81277 87 aa2.89□□□□□ -1.95
SMARCC1-206ENST00000485737 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
SMARCC1-206ENST00000485737 A0A096LNI7 61 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 A0A1W2PNN7 141 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 J3QKU1 62 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 CD164Q04900 197 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 MOBPQ13875 183 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 COA5Q86WW8 74 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 VWFP04275 2813 aa2.88□□□□□ -1.95
SMARCC1-206ENST00000485737 SETD2Q9BYW2 2564 aaPredicted RBP2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 HIVEP2P31629 2446 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 RPL37AP61513 92 aaKnown RBP2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 ATP11AUNQ6ZP68 121 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 Q6ZR54 194 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 TP53AIP1Q9HCN2 124 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 MTORP42345 2549 aa2.87□□□□□ -1.95
SMARCC1-206ENST00000485737 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 A6NN06 94 aa2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 KRTAP10-6P60371 365 aaPredicted RBP2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 C14orf177Q52M58 125 aa2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 KRTAP13-1Q8IUC0 172 aa2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 CDC42SE1Q9NRR8 79 aa2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 LINC01558Q9Y6Z2 57 aa2.86□□□□□ -1.95
SMARCC1-206ENST00000485737 UNC79Q9P2D8 2635 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 A8MU10 97 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 NDUFS5O43920 106 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 LCA10Q71F78 164 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 Q96NJ1 140 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 TENM4Q6N022 2769 aa2.85□□□□□ -1.95
SMARCC1-206ENST00000485737 IGKV2-24A0A0C4DH68 120 aa2.84□□□□□ -1.95
SMARCC1-206ENST00000485737 LINC00483Q53H64 154 aa2.84□□□□□ -1.95
SMARCC1-206ENST00000485737 PHF5AQ7RTV0 110 aaKnown RBP2.84□□□□□ -1.95
SMARCC1-206ENST00000485737 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
SMARCC1-206ENST00000485737 C8orf17Q9NRJ1 99 aa2.84□□□□□ -1.95
SMARCC1-206ENST00000485737 ACANP16112 2415 aa2.83□□□□□ -1.96
SMARCC1-206ENST00000485737 A6NED7 52 aa2.83□□□□□ -1.96
SMARCC1-206ENST00000485737 NOTCH2Q04721 2471 aa2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 NSD1Q96L73 2696 aaPredicted RBP2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 TENM1Q9UKZ4 2725 aa2.82□□□□□ -1.96
SMARCC1-206ENST00000485737 A0A1B0GVX0 72 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms