RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PPDPFLQ8WWR9 84 aa11.6□□□□□ -0.55
COL6A2-208ENST00000485591 OCIAD2Q56VL3 154 aa11.59□□□□□ -0.55
COL6A2-208ENST00000485591 SCGB1C2P0DMR2 95 aa11.58□□□□□ -0.56
COL6A2-208ENST00000485591 DNAL4O96015 105 aa11.55□□□□□ -0.56
COL6A2-208ENST00000485591 SPAG11AQ6PDA7 123 aa11.55□□□□□ -0.56
COL6A2-208ENST00000485591 NAA38Q9BRA0 125 aaKnown RBP11.55□□□□□ -0.56
COL6A2-208ENST00000485591 SNHG12Q9BXW3 62 aa11.55□□□□□ -0.56
COL6A2-208ENST00000485591 LST1O00453 97 aa11.54□□□□□ -0.56
COL6A2-208ENST00000485591 HERC1Q15751 4861 aa11.54□□□□□ -0.56
COL6A2-208ENST00000485591 GHRHP01286 108 aa11.53□□□□□ -0.56
COL6A2-208ENST00000485591 TRACP01848 142 aa11.53□□□□□ -0.56
COL6A2-208ENST00000485591 F8WEM9 126 aa11.52□□□□□ -0.57
COL6A2-208ENST00000485591 C4orf48Q5BLP8 95 aa11.52□□□□□ -0.57
COL6A2-208ENST00000485591 PCP4L1A6NKN8 68 aa11.51□□□□□ -0.57
COL6A2-208ENST00000485591 TAX1BP3O14907 124 aa11.51□□□□□ -0.57
COL6A2-208ENST00000485591 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
COL6A2-208ENST00000485591 C9orf118A6NHY6 69 aa11.49□□□□□ -0.57
COL6A2-208ENST00000485591 H3BUT2 72 aa11.49□□□□□ -0.57
COL6A2-208ENST00000485591 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
COL6A2-208ENST00000485591 H3BQ85 93 aa11.48□□□□□ -0.57
COL6A2-208ENST00000485591 SPINK1P00995 79 aa11.48□□□□□ -0.57
COL6A2-208ENST00000485591 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
COL6A2-208ENST00000485591 TCL1BO95988 128 aa11.47□□□□□ -0.57
COL6A2-208ENST00000485591 ATXN8Q156A1 80 aa11.46□□□□□ -0.57
COL6A2-208ENST00000485591 FABP2P12104 132 aa11.45□□□□□ -0.58
COL6A2-208ENST00000485591 NDUFV3P56181 108 aaKnown RBP11.45□□□□□ -0.58
COL6A2-208ENST00000485591 RPS29P62273 56 aaKnown RBP11.45□□□□□ -0.58
COL6A2-208ENST00000485591 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
COL6A2-208ENST00000485591 TRBV20-1A0A075B6N2 111 aa11.43□□□□□ -0.58
COL6A2-208ENST00000485591 TMEM256-PLSCR3K7ERE1 68 aa11.43□□□□□ -0.58
COL6A2-208ENST00000485591 CD164Q04900 197 aa11.43□□□□□ -0.58
COL6A2-208ENST00000485591 Q6JHZ5 121 aa11.43□□□□□ -0.58
COL6A2-208ENST00000485591 A0A1W2PPM0 123 aa11.42□□□□□ -0.58
COL6A2-208ENST00000485591 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
COL6A2-208ENST00000485591 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
COL6A2-208ENST00000485591 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
COL6A2-208ENST00000485591 HRCT1Q6UXD1 115 aa11.38□□□□□ -0.59
COL6A2-208ENST00000485591 H3BMG7 143 aa11.37□□□□□ -0.59
COL6A2-208ENST00000485591 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
COL6A2-208ENST00000485591 LIMD2Q9BT23 127 aa11.35□□□□□ -0.59
COL6A2-208ENST00000485591 RETNLBQ9BQ08 111 aa11.34□□□□□ -0.59
COL6A2-208ENST00000485591 HMCN2Q8NDA2 5059 aa11.33□□□□□ -0.6
COL6A2-208ENST00000485591 PRR4Q16378 134 aa11.31□□□□□ -0.6
COL6A2-208ENST00000485591 ANKRD29Q8N6D5 301 aa11.31□□□□□ -0.6
COL6A2-208ENST00000485591 C9JAW5 83 aa11.3□□□□□ -0.6
COL6A2-208ENST00000485591 Q5XG85 94 aa11.3□□□□□ -0.6
COL6A2-208ENST00000485591 SPCS1Q9Y6A9 102 aa11.3□□□□□ -0.6
COL6A2-208ENST00000485591 TRBV7-7A0A0K0K1E9 115 aa11.28□□□□□ -0.6
COL6A2-208ENST00000485591 A0A1B0GV72 72 aa11.28□□□□□ -0.6
COL6A2-208ENST00000485591 Q6Q795 121 aa11.28□□□□□ -0.6
COL6A2-208ENST00000485591 FP248Q71RG6 208 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-208ENST00000485591 TEN1Q86WV5 123 aa11.26□□□□□ -0.61
COL6A2-208ENST00000485591 H3BT86 120 aa11.24□□□□□ -0.61
COL6A2-208ENST00000485591 RBM3P98179 157 aaKnown RBP11.24□□□□□ -0.61
COL6A2-208ENST00000485591 TRBV7-4A0A0J9YYF1 115 aa11.23□□□□□ -0.61
COL6A2-208ENST00000485591 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.61
COL6A2-208ENST00000485591 A0A1W2PNM2 257 aa11.21□□□□□ -0.61
COL6A2-208ENST00000485591 JMJD7-PLA2G4BH0Y9G9 81 aa11.21□□□□□ -0.61
COL6A2-208ENST00000485591 K7EP34 96 aa11.21□□□□□ -0.61
COL6A2-208ENST00000485591 MTURNQ8N3F0 131 aa11.2□□□□□ -0.62
COL6A2-208ENST00000485591 DSCR8Q96T75 97 aa11.2□□□□□ -0.62
COL6A2-208ENST00000485591 ASB16-AS1Q495Z4 193 aa11.19□□□□□ -0.62
COL6A2-208ENST00000485591 CCKP06307 115 aa11.17□□□□□ -0.62
COL6A2-208ENST00000485591 SS18L2Q9UHA2 77 aa11.17□□□□□ -0.62
COL6A2-208ENST00000485591 TPRXLQ17RH7 258 aa11.16□□□□□ -0.62
COL6A2-208ENST00000485591 C1orf195Q5TG92 126 aa11.16□□□□□ -0.62
COL6A2-208ENST00000485591 OBSCN-AS1Q96MR7 158 aa11.16□□□□□ -0.62
COL6A2-208ENST00000485591 A0A087WSZ3 146 aa11.15□□□□□ -0.62
COL6A2-208ENST00000485591 GTF2H5Q6ZYL4 71 aa11.15□□□□□ -0.62
COL6A2-208ENST00000485591 LOC110117498A0A087WWA1 95 aa11.13□□□□□ -0.63
COL6A2-208ENST00000485591 PDE6GP18545 87 aa11.11□□□□□ -0.63
COL6A2-208ENST00000485591 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
COL6A2-208ENST00000485591 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
COL6A2-208ENST00000485591 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
COL6A2-208ENST00000485591 PRO0461Q9UI25 63 aa11.11□□□□□ -0.63
COL6A2-208ENST00000485591 Q6ZQT0 140 aa11.1□□□□□ -0.63
COL6A2-208ENST00000485591 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
COL6A2-208ENST00000485591 LPAP08519 4548 aa11.07□□□□□ -0.64
COL6A2-208ENST00000485591 C21orf62-AS1Q17RA5 79 aa11.06□□□□□ -0.64
COL6A2-208ENST00000485591 LRP2P98164 4655 aa11.05□□□□□ -0.64
COL6A2-208ENST00000485591 A0A1B0GW54 56 aa11.03□□□□□ -0.64
COL6A2-208ENST00000485591 Q96NJ1 140 aa11.03□□□□□ -0.64
COL6A2-208ENST00000485591 CDIP1Q9H305 208 aa11.03□□□□□ -0.64
COL6A2-208ENST00000485591 F8W1H4 67 aa11.01□□□□□ -0.65
COL6A2-208ENST00000485591 LINC00472Q9H8W2 130 aa10.96□□□□□ -0.65
COL6A2-208ENST00000485591 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
COL6A2-208ENST00000485591 UBR4Q5T4S7 5183 aa10.94□□□□□ -0.66
COL6A2-208ENST00000485591 A0A1B0GV90 55 aa10.92□□□□□ -0.66
COL6A2-208ENST00000485591 SIGMAR1Q99720 223 aa10.92□□□□□ -0.66
COL6A2-208ENST00000485591 IGKV4-1P06312 121 aa10.91□□□□□ -0.66
COL6A2-208ENST00000485591 XP32Q5T750 250 aa10.91□□□□□ -0.66
COL6A2-208ENST00000485591 DEFB116Q30KQ4 102 aa10.89□□□□□ -0.67
COL6A2-208ENST00000485591 ETDBQ3ZM63 59 aa10.89□□□□□ -0.67
COL6A2-208ENST00000485591 J3KT08 172 aa10.86□□□□□ -0.67
COL6A2-208ENST00000485591 NREPQ16612 68 aa10.84□□□□□ -0.67
COL6A2-208ENST00000485591 A0A1B0GVX0 72 aa10.77□□□□□ -0.69
COL6A2-208ENST00000485591 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.69
COL6A2-208ENST00000485591 DSCR10P59022 87 aa10.76□□□□□ -0.69
COL6A2-208ENST00000485591 IGHV6-1A0A0B4J1U7 121 aa10.75□□□□□ -0.69
COL6A2-208ENST00000485591 RPL37P61927 97 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms