RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 A0A0D9SG42 100 aa9.69□□□□□ -0.86
RXRA-203ENST00000484822 C9orf92A6NGG3 77 aa9.68□□□□□ -0.86
RXRA-203ENST00000484822 CASC10Q5T4H9 136 aa9.68□□□□□ -0.86
RXRA-203ENST00000484822 COL6A3P12111 3177 aa9.67□□□□□ -0.86
RXRA-203ENST00000484822 SETXQ7Z333 2677 aaKnown RBP9.63□□□□□ -0.87
RXRA-203ENST00000484822 SPRR4Q96PI1 79 aa9.62□□□□□ -0.87
RXRA-203ENST00000484822 SPEGQ15772 3267 aa9.62□□□□□ -0.87
RXRA-203ENST00000484822 FREM2Q5SZK8 3169 aa9.62□□□□□ -0.87
RXRA-203ENST00000484822 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
RXRA-203ENST00000484822 NBEAQ8NFP9 2946 aa9.61□□□□□ -0.87
RXRA-203ENST00000484822 Q75L30 129 aa9.61□□□□□ -0.87
RXRA-203ENST00000484822 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
RXRA-203ENST00000484822 BOD1L1Q8NFC6 3051 aa9.6□□□□□ -0.87
RXRA-203ENST00000484822 IGLV7-46A0A075B6I9 117 aa9.6□□□□□ -0.87
RXRA-203ENST00000484822 SMR3BP02814 79 aaPredicted RBP9.6□□□□□ -0.87
RXRA-203ENST00000484822 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
RXRA-203ENST00000484822 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
RXRA-203ENST00000484822 FRYLO94915 3013 aa9.59□□□□□ -0.87
RXRA-203ENST00000484822 IGLV7-43P04211 117 aa9.59□□□□□ -0.88
RXRA-203ENST00000484822 LINC01554Q52M75 96 aa9.59□□□□□ -0.88
RXRA-203ENST00000484822 EYSQ5T1H1 3165 aa9.58□□□□□ -0.88
RXRA-203ENST00000484822 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
RXRA-203ENST00000484822 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
RXRA-203ENST00000484822 H3BS24 57 aa9.57□□□□□ -0.88
RXRA-203ENST00000484822 CNBPP62633 177 aaKnown RBP9.57□□□□□ -0.88
RXRA-203ENST00000484822 OXTP01178 125 aa9.54□□□□□ -0.88
RXRA-203ENST00000484822 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
RXRA-203ENST00000484822 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
RXRA-203ENST00000484822 Q5VV11 94 aa9.51□□□□□ -0.89
RXRA-203ENST00000484822 HRES1P13985 223 aa9.51□□□□□ -0.89
RXRA-203ENST00000484822 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
RXRA-203ENST00000484822 Q8NDZ9 215 aa9.49□□□□□ -0.89
RXRA-203ENST00000484822 ATMQ13315 3056 aa9.48□□□□□ -0.89
RXRA-203ENST00000484822 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
RXRA-203ENST00000484822 LUZP6Q538Z0 58 aa9.47□□□□□ -0.89
RXRA-203ENST00000484822 TEX15Q9BXT5 2789 aa9.47□□□□□ -0.89
RXRA-203ENST00000484822 A0A1B0GU33 70 aa9.47□□□□□ -0.89
RXRA-203ENST00000484822 BAHCC1Q9P281 2608 aa9.45□□□□□ -0.9
RXRA-203ENST00000484822 DMXL2Q8TDJ6 3036 aa9.45□□□□□ -0.9
RXRA-203ENST00000484822 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
RXRA-203ENST00000484822 FLNCQ14315 2725 aa9.45□□□□□ -0.9
RXRA-203ENST00000484822 SPINK7P58062 85 aa9.44□□□□□ -0.9
RXRA-203ENST00000484822 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
RXRA-203ENST00000484822 REV3LO60673 3130 aa9.42□□□□□ -0.9
RXRA-203ENST00000484822 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
RXRA-203ENST00000484822 COL12A1Q99715 3063 aa9.4□□□□□ -0.9
RXRA-203ENST00000484822 TNP2Q05952 138 aa9.39□□□□□ -0.91
RXRA-203ENST00000484822 STAB1Q9NY15 2570 aa9.39□□□□□ -0.91
RXRA-203ENST00000484822 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
RXRA-203ENST00000484822 KALRNO60229 2985 aa9.39□□□□□ -0.91
RXRA-203ENST00000484822 Q6ZSA8 131 aa9.38□□□□□ -0.91
RXRA-203ENST00000484822 ZZEF1O43149 2961 aa9.37□□□□□ -0.91
RXRA-203ENST00000484822 TACC2O95359 2948 aa9.36□□□□□ -0.91
RXRA-203ENST00000484822 SPTBN5Q9NRC6 3674 aaKnown RBP9.36□□□□□ -0.91
RXRA-203ENST00000484822 CFAP47Q6ZTR5 3102 aa9.34□□□□□ -0.91
RXRA-203ENST00000484822 NOTCH1P46531 2555 aa9.34□□□□□ -0.91
RXRA-203ENST00000484822 UBR5O95071 2799 aaPredicted RBP9.33□□□□□ -0.92
RXRA-203ENST00000484822 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
RXRA-203ENST00000484822 NBEAL1Q6ZS30 2694 aa9.32□□□□□ -0.92
RXRA-203ENST00000484822 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
RXRA-203ENST00000484822 LCE6AA0A183 80 aa9.29□□□□□ -0.92
RXRA-203ENST00000484822 SPRR1AP35321 89 aa9.29□□□□□ -0.92
RXRA-203ENST00000484822 TNRC18O15417 2968 aaPredicted RBP9.29□□□□□ -0.92
RXRA-203ENST00000484822 LINC00472Q9H8W2 130 aa9.28□□□□□ -0.92
RXRA-203ENST00000484822 LRBAP50851 2863 aa9.27□□□□□ -0.93
RXRA-203ENST00000484822 M0R2T5 61 aa9.27□□□□□ -0.93
RXRA-203ENST00000484822 MYO15AQ9UKN7 3530 aa9.26□□□□□ -0.93
RXRA-203ENST00000484822 DMXL1Q9Y485 3027 aa9.26□□□□□ -0.93
RXRA-203ENST00000484822 NBEAL2Q6ZNJ1 2754 aa9.26□□□□□ -0.93
RXRA-203ENST00000484822 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
RXRA-203ENST00000484822 Q5W150 140 aa9.25□□□□□ -0.93
RXRA-203ENST00000484822 LOC400499M0QZD8 3231 aa9.22□□□□□ -0.93
RXRA-203ENST00000484822 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
RXRA-203ENST00000484822 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
RXRA-203ENST00000484822 DMAC1Q96GE9 116 aa9.21□□□□□ -0.93
RXRA-203ENST00000484822 PLAC8Q9NZF1 115 aa9.2□□□□□ -0.94
RXRA-203ENST00000484822 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
RXRA-203ENST00000484822 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
RXRA-203ENST00000484822 SPRR1BP22528 89 aa9.15□□□□□ -0.94
RXRA-203ENST00000484822 A0A0A0MQY5 61 aa9.13□□□□□ -0.95
RXRA-203ENST00000484822 Q5VSD8 79 aa9.13□□□□□ -0.95
RXRA-203ENST00000484822 STAB2Q8WWQ8 2551 aa9.12□□□□□ -0.95
RXRA-203ENST00000484822 ITPR2Q14571 2701 aa9.12□□□□□ -0.95
RXRA-203ENST00000484822 LINC00483Q53H64 154 aa9.11□□□□□ -0.95
RXRA-203ENST00000484822 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
RXRA-203ENST00000484822 USP34Q70CQ2 3546 aa9.08□□□□□ -0.96
RXRA-203ENST00000484822 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
RXRA-203ENST00000484822 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
RXRA-203ENST00000484822 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
RXRA-203ENST00000484822 NSD1Q96L73 2696 aaPredicted RBP9.06□□□□□ -0.96
RXRA-203ENST00000484822 ZANQ9Y493 2812 aa9.06□□□□□ -0.96
RXRA-203ENST00000484822 UTP20O75691 2785 aaKnown RBP9.05□□□□□ -0.96
RXRA-203ENST00000484822 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
RXRA-203ENST00000484822 ROMO1P60602 79 aa9.04□□□□□ -0.96
RXRA-203ENST00000484822 S4R3F8 94 aa9.04□□□□□ -0.96
RXRA-203ENST00000484822 KRTAP29-1A8MX34 341 aaPredicted RBP9.03□□□□□ -0.96
RXRA-203ENST00000484822 Q6ZR54 194 aa9□□□□□ -0.97
RXRA-203ENST00000484822 H1FX-AS1Q4G0G2 97 aa8.98□□□□□ -0.97
RXRA-203ENST00000484822 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
RXRA-203ENST00000484822 R4GN34 69 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms