RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 KALRNO60229 2985 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 UBR3Q6ZT12 1888 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 TNRC6CQ9HCJ0 1690 aaKnown RBP0.43□□□□□ -2.34
VPS13A-211ENST00000484581 KIF20BQ96Q89 1820 aa0.43□□□□□ -2.34
VPS13A-211ENST00000484581 CFAP47Q6ZTR5 3102 aa0.43□□□□□ -2.34
VPS13A-211ENST00000484581 UBR5O95071 2799 aaPredicted RBP0.43□□□□□ -2.34
VPS13A-211ENST00000484581 EIF2AK4Q9P2K8 1649 aaKnown RBP0.43□□□□□ -2.34
VPS13A-211ENST00000484581 ARFGEF2Q9Y6D5 1785 aa0.43□□□□□ -2.34
VPS13A-211ENST00000484581 RANBP2P49792 3224 aaKnown RBP0.43□□□□□ -2.34
VPS13A-211ENST00000484581 USP9YO00507 2555 aaPredicted RBP0.43□□□□□ -2.34
VPS13A-211ENST00000484581 KCNQ1DNQ9H478 68 aa0.43□□□□□ -2.34
VPS13A-211ENST00000484581 MYO9AB2RTY4 2548 aa0.43□□□□□ -2.34
VPS13A-211ENST00000484581 FASNP49327 2511 aaKnown RBP0.43□□□□□ -2.34
VPS13A-211ENST00000484581 NCOR2Q9Y618 2525 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 CCDC180Q9P1Z9 1646 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 COL12A1Q99715 3063 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 CEP295Q9C0D2 2601 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 QSER1Q2KHR3 1735 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 TIAM2Q8IVF5 1701 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 DEFB131BA0A096LNP1 70 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 K7EMI3 77 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 M0R1W7 72 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 KRTAP20-1Q3LI63 56 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 NCBP2-AS2Q69YL0 99 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 RYR1P21817 5038 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 PLCH1Q4KWH8 1693 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 CPS1P31327 1500 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 CFAP46Q8IYW2 2715 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 GVINP1Q7Z2Y8 2422 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 CREBBPQ92793 2442 aa0.42□□□□□ -2.34
VPS13A-211ENST00000484581 RYR3Q15413 4870 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 EEA1Q15075 1411 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 CENPFP49454 3210 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 IAPPP10997 89 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 CRIP1P50238 77 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 NESP48681 1621 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 FLNCQ14315 2725 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 PRXQ9BXM0 1461 aa0.41□□□□□ -2.34
VPS13A-211ENST00000484581 TENM2Q9NT68 2774 aa0.4□□□□□ -2.34
VPS13A-211ENST00000484581 WIZO95785 1651 aa0.4□□□□□ -2.34
VPS13A-211ENST00000484581 NEBP20929 6669 aa0.4□□□□□ -2.34
VPS13A-211ENST00000484581 COL14A1Q05707 1796 aaKnown RBP0.4□□□□□ -2.35
VPS13A-211ENST00000484581 BCORQ6W2J9 1755 aa0.4□□□□□ -2.35
VPS13A-211ENST00000484581 ABCC6O95255 1503 aa0.4□□□□□ -2.35
VPS13A-211ENST00000484581 H0YAA0 97 aa0.4□□□□□ -2.35
VPS13A-211ENST00000484581 MINOS1Q5TGZ0 78 aa0.4□□□□□ -2.35
VPS13A-211ENST00000484581 DSTQ03001 7570 aaKnown RBP0.4□□□□□ -2.35
VPS13A-211ENST00000484581 ZANQ9Y493 2812 aa0.4□□□□□ -2.35
VPS13A-211ENST00000484581 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.39□□□□□ -2.35
VPS13A-211ENST00000484581 HIVEP3Q5T1R4 2406 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 C5orf42Q9H799 3197 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 KMT2CQ8NEZ4 4911 aaKnown RBP0.39□□□□□ -2.35
VPS13A-211ENST00000484581 UNC80Q8N2C7 3258 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 NBEAQ8NFP9 2946 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 CICQ96RK0 1608 aaPredicted RBP0.39□□□□□ -2.35
VPS13A-211ENST00000484581 ITSN1Q15811 1721 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 NRAPQ86VF7 1730 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 NBEAL1Q6ZS30 2694 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 NMES1Q9C002 83 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 TIAM1Q13009 1591 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 NHSQ6T4R5 1651 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 LAMA3Q16787 3333 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 TEX15Q9BXT5 2789 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 CRYBG3Q68DQ2 2970 aa0.39□□□□□ -2.35
VPS13A-211ENST00000484581 DNHD1Q96M86 4753 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 TLN1Q9Y490 2541 aaKnown RBP0.38□□□□□ -2.35
VPS13A-211ENST00000484581 EPPK1P58107 5090 aaKnown RBP0.38□□□□□ -2.35
VPS13A-211ENST00000484581 HERC1Q15751 4861 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 SPEGQ15772 3267 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 DNAH12Q6ZR08 3092 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 BOD1L1Q8NFC6 3051 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 UGGT1Q9NYU2 1555 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 H0YGG7 62 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 DEFB130BP0DP73 79 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 DEFB130AP0DP74 79 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 SERF2P84101 59 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 DEFB135Q30KP9 77 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 DEFB114Q30KQ6 69 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 RYR2Q92736 4967 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 MXRA5Q9NR99 2828 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 EP400Q96L91 3159 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 ABCA6Q8N139 1617 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
VPS13A-211ENST00000484581 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 HRNRQ86YZ3 2850 aaPredicted RBP0.37□□□□□ -2.35
VPS13A-211ENST00000484581 RIF1Q5UIP0 2472 aaKnown RBP0.37□□□□□ -2.35
VPS13A-211ENST00000484581 CELSR1Q9NYQ6 3014 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 WNK2Q9Y3S1 2297 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 HIVEP1P15822 2718 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 MUC3AQ02505 3323 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 ABCA10Q8WWZ4 1543 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 PKD1L1Q8TDX9 2849 aa0.37□□□□□ -2.35
VPS13A-211ENST00000484581 CSMD1Q96PZ7 3565 aa0.36□□□□□ -2.35
VPS13A-211ENST00000484581 LRBAP50851 2863 aa0.36□□□□□ -2.35
VPS13A-211ENST00000484581 UTP20O75691 2785 aaKnown RBP0.36□□□□□ -2.35
VPS13A-211ENST00000484581 SONP18583 2426 aaKnown RBP0.36□□□□□ -2.35
VPS13A-211ENST00000484581 DDX60LQ5H9U9 1706 aaKnown RBP0.36□□□□□ -2.35
VPS13A-211ENST00000484581 DCHS1Q96JQ0 3298 aa0.36□□□□□ -2.35
VPS13A-211ENST00000484581 COL7A1Q02388 2944 aa0.36□□□□□ -2.35
VPS13A-211ENST00000484581 M0R2T5 61 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms