RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 A0A087WSZ3 146 aa12.45□□□□□ -0.42
RPUSD3-216ENST00000484134 LINC00588Q9Y4M8 146 aa12.45□□□□□ -0.42
RPUSD3-216ENST00000484134 V9GYY9 64 aa12.44□□□□□ -0.42
RPUSD3-216ENST00000484134 PRLHP81277 87 aa12.43□□□□□ -0.42
RPUSD3-216ENST00000484134 MAST4O15021 2626 aa12.42□□□□□ -0.42
RPUSD3-216ENST00000484134 LINC00208Q96KT6 92 aa12.42□□□□□ -0.42
RPUSD3-216ENST00000484134 KRTAP29-1A8MX34 341 aaPredicted RBP12.4□□□□□ -0.42
RPUSD3-216ENST00000484134 NDUFB1O75438 58 aa12.39□□□□□ -0.43
RPUSD3-216ENST00000484134 A8MUN3 132 aa12.39□□□□□ -0.43
RPUSD3-216ENST00000484134 MP68P56378 58 aa12.39□□□□□ -0.43
RPUSD3-216ENST00000484134 IGLV8-61A0A075B6I0 122 aa12.37□□□□□ -0.43
RPUSD3-216ENST00000484134 NOTCH1P46531 2555 aa12.36□□□□□ -0.43
RPUSD3-216ENST00000484134 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
RPUSD3-216ENST00000484134 CMYA5Q8N3K9 4069 aa12.35□□□□□ -0.43
RPUSD3-216ENST00000484134 A8MU10 97 aa12.35□□□□□ -0.43
RPUSD3-216ENST00000484134 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
RPUSD3-216ENST00000484134 STAB1Q9NY15 2570 aa12.33□□□□□ -0.44
RPUSD3-216ENST00000484134 A0A096LNI7 61 aa12.33□□□□□ -0.44
RPUSD3-216ENST00000484134 H0Y9P7 68 aa12.32□□□□□ -0.44
RPUSD3-216ENST00000484134 CNBPP62633 177 aaKnown RBP12.32□□□□□ -0.44
RPUSD3-216ENST00000484134 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
RPUSD3-216ENST00000484134 CASC2Q6XLA1 102 aa12.31□□□□□ -0.44
RPUSD3-216ENST00000484134 Q5VV11 94 aa12.3□□□□□ -0.44
RPUSD3-216ENST00000484134 SEC61GP60059 68 aa12.3□□□□□ -0.44
RPUSD3-216ENST00000484134 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
RPUSD3-216ENST00000484134 UBE2AP49459 152 aa12.29□□□□□ -0.44
RPUSD3-216ENST00000484134 PMAIP1Q13794 54 aa12.28□□□□□ -0.44
RPUSD3-216ENST00000484134 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-216ENST00000484134 SPANXA2-OT1Q8N9U9 137 aa12.27□□□□□ -0.45
RPUSD3-216ENST00000484134 Q8N9P0 234 aaPredicted RBP12.26□□□□□ -0.45
RPUSD3-216ENST00000484134 LINC00472Q9H8W2 130 aa12.26□□□□□ -0.45
RPUSD3-216ENST00000484134 DNAH3Q8TD57 4116 aa12.25□□□□□ -0.45
RPUSD3-216ENST00000484134 C16orf90A8MZG2 172 aa12.24□□□□□ -0.45
RPUSD3-216ENST00000484134 COL6A5A8TX70 2615 aa12.23□□□□□ -0.45
RPUSD3-216ENST00000484134 A8MWP4 228 aa12.23□□□□□ -0.45
RPUSD3-216ENST00000484134 C9orf163Q8N9P6 203 aa12.23□□□□□ -0.45
RPUSD3-216ENST00000484134 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
RPUSD3-216ENST00000484134 LYSTQ99698 3801 aa12.22□□□□□ -0.45
RPUSD3-216ENST00000484134 H3BPC8 53 aa12.21□□□□□ -0.45
RPUSD3-216ENST00000484134 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
RPUSD3-216ENST00000484134 CSMD3Q7Z407 3707 aa12.2□□□□□ -0.46
RPUSD3-216ENST00000484134 KRTAP1-5Q9BYS1 174 aa12.19□□□□□ -0.46
RPUSD3-216ENST00000484134 CHTF8P0CG12 524 aa12.18□□□□□ -0.46
RPUSD3-216ENST00000484134 SPRR1BP22528 89 aa12.17□□□□□ -0.46
RPUSD3-216ENST00000484134 TENM2Q9NT68 2774 aa12.17□□□□□ -0.46
RPUSD3-216ENST00000484134 CHKB-CPT1BH3BT56 60 aa12.17□□□□□ -0.46
RPUSD3-216ENST00000484134 HUWE1Q7Z6Z7 4374 aaKnown RBP12.16□□□□□ -0.46
RPUSD3-216ENST00000484134 PRR15LQ9BU68 103 aa12.15□□□□□ -0.46
RPUSD3-216ENST00000484134 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
RPUSD3-216ENST00000484134 MMP24-AS1A0A0U1RRL7 71 aa12.15□□□□□ -0.46
RPUSD3-216ENST00000484134 LIMD2Q9BT23 127 aa12.15□□□□□ -0.46
RPUSD3-216ENST00000484134 H0Y9J4 135 aa12.13□□□□□ -0.47
RPUSD3-216ENST00000484134 COA5Q86WW8 74 aa12.11□□□□□ -0.47
RPUSD3-216ENST00000484134 COL7A1Q02388 2944 aa12.11□□□□□ -0.47
RPUSD3-216ENST00000484134 IGLV7-46A0A075B6I9 117 aa12.09□□□□□ -0.47
RPUSD3-216ENST00000484134 LCA10Q71F78 164 aa12.07□□□□□ -0.48
RPUSD3-216ENST00000484134 PCOTHQ58A44 107 aa12.06□□□□□ -0.48
RPUSD3-216ENST00000484134 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
RPUSD3-216ENST00000484134 CD164Q04900 197 aa12.04□□□□□ -0.48
RPUSD3-216ENST00000484134 Q96NJ1 140 aa12.04□□□□□ -0.48
RPUSD3-216ENST00000484134 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
RPUSD3-216ENST00000484134 Q75L30 129 aa12.03□□□□□ -0.48
RPUSD3-216ENST00000484134 LOC101927531A0A1B0GV80 90 aa12.03□□□□□ -0.48
RPUSD3-216ENST00000484134 ASB16-AS1Q495Z4 193 aa12.01□□□□□ -0.49
RPUSD3-216ENST00000484134 SPTSSBQ8NFR3 76 aa12□□□□□ -0.49
RPUSD3-216ENST00000484134 PANO1I0J062 215 aa11.99□□□□□ -0.49
RPUSD3-216ENST00000484134 A6NED7 52 aa11.98□□□□□ -0.49
RPUSD3-216ENST00000484134 KRTAP13-1Q8IUC0 172 aa11.98□□□□□ -0.49
RPUSD3-216ENST00000484134 IGLV9-49A0A0B4J1Y8 123 aa11.95□□□□□ -0.5
RPUSD3-216ENST00000484134 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
RPUSD3-216ENST00000484134 C8orf17Q9NRJ1 99 aa11.94□□□□□ -0.5
RPUSD3-216ENST00000484134 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
RPUSD3-216ENST00000484134 Q6ZR54 194 aa11.94□□□□□ -0.5
RPUSD3-216ENST00000484134 TP53AIP1Q9HCN2 124 aa11.93□□□□□ -0.5
RPUSD3-216ENST00000484134 K7EIL1 84 aa11.93□□□□□ -0.5
RPUSD3-216ENST00000484134 ATP11AUNQ6ZP68 121 aa11.93□□□□□ -0.5
RPUSD3-216ENST00000484134 MOBPQ13875 183 aa11.91□□□□□ -0.5
RPUSD3-216ENST00000484134 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
RPUSD3-216ENST00000484134 LINC01558Q9Y6Z2 57 aa11.9□□□□□ -0.5
RPUSD3-216ENST00000484134 C14orf177Q52M58 125 aa11.89□□□□□ -0.51
RPUSD3-216ENST00000484134 KTN1-AS1Q86SY8 53 aa11.89□□□□□ -0.51
RPUSD3-216ENST00000484134 IGHV6-1A0A0B4J1U7 121 aa11.88□□□□□ -0.51
RPUSD3-216ENST00000484134 NDUFS5O43920 106 aa11.88□□□□□ -0.51
RPUSD3-216ENST00000484134 HRES1P13985 223 aa11.88□□□□□ -0.51
RPUSD3-216ENST00000484134 A6NN06 94 aa11.87□□□□□ -0.51
RPUSD3-216ENST00000484134 UBE2DNLQ8IWF7 75 aa11.87□□□□□ -0.51
RPUSD3-216ENST00000484134 A0A087X002 238 aa11.86□□□□□ -0.51
RPUSD3-216ENST00000484134 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
RPUSD3-216ENST00000484134 CDC42SE1Q9NRR8 79 aa11.86□□□□□ -0.51
RPUSD3-216ENST00000484134 MGAM2Q2M2H8 2515 aa11.85□□□□□ -0.51
RPUSD3-216ENST00000484134 A0A1B0GVX0 72 aa11.85□□□□□ -0.51
RPUSD3-216ENST00000484134 APLNQ9ULZ1 77 aa11.83□□□□□ -0.52
RPUSD3-216ENST00000484134 SPINK7P58062 85 aa11.82□□□□□ -0.52
RPUSD3-216ENST00000484134 LCE2DQ5TA82 110 aaPredicted RBP11.81□□□□□ -0.52
RPUSD3-216ENST00000484134 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.81□□□□□ -0.52
RPUSD3-216ENST00000484134 LINC00483Q53H64 154 aa11.8□□□□□ -0.52
RPUSD3-216ENST00000484134 MRPL34Q9BQ48 92 aaKnown RBP11.8□□□□□ -0.52
RPUSD3-216ENST00000484134 ANAPC11Q9NYG5 84 aa11.79□□□□□ -0.52
RPUSD3-216ENST00000484134 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
RPUSD3-216ENST00000484134 WWC2-AS2Q96NR7 200 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms