RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 A0A1W2PNM2 257 aa8.16□□□□□ -1.1
CPNE1-225ENST00000483495 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
CPNE1-225ENST00000483495 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
CPNE1-225ENST00000483495 CXCL6P80162 114 aa8.15□□□□□ -1.1
CPNE1-225ENST00000483495 F8WEM9 126 aa8.15□□□□□ -1.11
CPNE1-225ENST00000483495 Q8NBF4 154 aa8.15□□□□□ -1.11
CPNE1-225ENST00000483495 SPRR4Q96PI1 79 aa8.15□□□□□ -1.11
CPNE1-225ENST00000483495 HAMPP81172 84 aa8.14□□□□□ -1.11
CPNE1-225ENST00000483495 UQCRQO14949 82 aa8.13□□□□□ -1.11
CPNE1-225ENST00000483495 A0A087WVE0 104 aa8.13□□□□□ -1.11
CPNE1-225ENST00000483495 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
CPNE1-225ENST00000483495 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
CPNE1-225ENST00000483495 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
CPNE1-225ENST00000483495 COX7CP15954 63 aa8.11□□□□□ -1.11
CPNE1-225ENST00000483495 NREPQ16612 68 aa8.11□□□□□ -1.11
CPNE1-225ENST00000483495 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
CPNE1-225ENST00000483495 CRYGAP11844 174 aa8.1□□□□□ -1.11
CPNE1-225ENST00000483495 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
CPNE1-225ENST00000483495 SERP2Q8N6R1 65 aa8.09□□□□□ -1.12
CPNE1-225ENST00000483495 DNAH8Q96JB1 4490 aa8.08□□□□□ -1.12
CPNE1-225ENST00000483495 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
CPNE1-225ENST00000483495 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
CPNE1-225ENST00000483495 C9orf153Q5TBE3 101 aa8.06□□□□□ -1.12
CPNE1-225ENST00000483495 Q6ZSA8 131 aa8.06□□□□□ -1.12
CPNE1-225ENST00000483495 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
CPNE1-225ENST00000483495 ZNF861PO60384 105 aa8.06□□□□□ -1.12
CPNE1-225ENST00000483495 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
CPNE1-225ENST00000483495 SRRM2Q9UQ35 2752 aaKnown RBP8.05□□□□□ -1.12
CPNE1-225ENST00000483495 A0A0G2JQZ4 141 aa8.04□□□□□ -1.12
CPNE1-225ENST00000483495 CIRBP-AS1Q8TBR5 109 aa8.04□□□□□ -1.12
CPNE1-225ENST00000483495 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-225ENST00000483495 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
CPNE1-225ENST00000483495 SMIM20Q8N5G0 67 aa8.04□□□□□ -1.12
CPNE1-225ENST00000483495 PKD1P98161 4303 aa8.03□□□□□ -1.12
CPNE1-225ENST00000483495 BPY2O14599 106 aa8.03□□□□□ -1.12
CPNE1-225ENST00000483495 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
CPNE1-225ENST00000483495 IGLV7-43P04211 117 aa8.01□□□□□ -1.13
CPNE1-225ENST00000483495 IGKV4-1P06312 121 aa8□□□□□ -1.13
CPNE1-225ENST00000483495 LCE6AA0A183 80 aa8□□□□□ -1.13
CPNE1-225ENST00000483495 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
CPNE1-225ENST00000483495 SS18L2Q9UHA2 77 aa8□□□□□ -1.13
CPNE1-225ENST00000483495 SACSQ9NZJ4 4579 aa7.99□□□□□ -1.13
CPNE1-225ENST00000483495 A0A087WSZ3 146 aa7.98□□□□□ -1.13
CPNE1-225ENST00000483495 TRAV7A0A075B6U4 112 aa7.97□□□□□ -1.13
CPNE1-225ENST00000483495 Q8N9L7 120 aa7.97□□□□□ -1.13
CPNE1-225ENST00000483495 DSCR10P59022 87 aa7.96□□□□□ -1.14
CPNE1-225ENST00000483495 IGLV9-49A0A0B4J1Y8 123 aa7.95□□□□□ -1.14
CPNE1-225ENST00000483495 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
CPNE1-225ENST00000483495 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
CPNE1-225ENST00000483495 MOBPQ13875 183 aa7.9□□□□□ -1.14
CPNE1-225ENST00000483495 LINC00472Q9H8W2 130 aa7.9□□□□□ -1.14
CPNE1-225ENST00000483495 K7EQZ3 153 aa7.89□□□□□ -1.15
CPNE1-225ENST00000483495 TMEM258P61165 79 aa7.89□□□□□ -1.15
CPNE1-225ENST00000483495 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
CPNE1-225ENST00000483495 C20orf197Q8N268 126 aa7.87□□□□□ -1.15
CPNE1-225ENST00000483495 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
CPNE1-225ENST00000483495 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
CPNE1-225ENST00000483495 KLKP1Q107X0 134 aa7.85□□□□□ -1.15
CPNE1-225ENST00000483495 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
CPNE1-225ENST00000483495 J3KT08 172 aa7.83□□□□□ -1.16
CPNE1-225ENST00000483495 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
CPNE1-225ENST00000483495 Q96NJ1 140 aa7.83□□□□□ -1.16
CPNE1-225ENST00000483495 OCR1Q9BZK8 76 aa7.83□□□□□ -1.16
CPNE1-225ENST00000483495 RYR2Q92736 4967 aa7.83□□□□□ -1.16
CPNE1-225ENST00000483495 A8MWP4 228 aa7.83□□□□□ -1.16
CPNE1-225ENST00000483495 HCG22E2RYF7 251 aa7.82□□□□□ -1.16
CPNE1-225ENST00000483495 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
CPNE1-225ENST00000483495 HRCT1Q6UXD1 115 aa7.82□□□□□ -1.16
CPNE1-225ENST00000483495 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
CPNE1-225ENST00000483495 PKHD1P08F94 4074 aa7.82□□□□□ -1.16
CPNE1-225ENST00000483495 CD164Q04900 197 aa7.81□□□□□ -1.16
CPNE1-225ENST00000483495 NDUFC1O43677 76 aa7.81□□□□□ -1.16
CPNE1-225ENST00000483495 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
CPNE1-225ENST00000483495 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
CPNE1-225ENST00000483495 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
CPNE1-225ENST00000483495 A0A087X002 238 aa7.78□□□□□ -1.16
CPNE1-225ENST00000483495 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
CPNE1-225ENST00000483495 KRTAP29-1A8MX34 341 aaPredicted RBP7.77□□□□□ -1.17
CPNE1-225ENST00000483495 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
CPNE1-225ENST00000483495 TMEM254Q8TBM7 123 aa7.77□□□□□ -1.17
CPNE1-225ENST00000483495 H7BZZ5 65 aa7.77□□□□□ -1.17
CPNE1-225ENST00000483495 SNURFQ9Y675 71 aa7.76□□□□□ -1.17
CPNE1-225ENST00000483495 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
CPNE1-225ENST00000483495 NDUFB1O75438 58 aa7.75□□□□□ -1.17
CPNE1-225ENST00000483495 ASB16-AS1Q495Z4 193 aa7.73□□□□□ -1.17
CPNE1-225ENST00000483495 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
CPNE1-225ENST00000483495 WFDC13Q8IUB5 93 aa7.73□□□□□ -1.17
CPNE1-225ENST00000483495 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
CPNE1-225ENST00000483495 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
CPNE1-225ENST00000483495 CASC2Q6XLA1 102 aa7.72□□□□□ -1.17
CPNE1-225ENST00000483495 MMP24-AS1A0A0U1RRL7 71 aa7.72□□□□□ -1.17
CPNE1-225ENST00000483495 A0A0U1RQV1 116 aa7.71□□□□□ -1.18
CPNE1-225ENST00000483495 C5orf47Q569G3 176 aa7.7□□□□□ -1.18
CPNE1-225ENST00000483495 Q5XG85 94 aa7.7□□□□□ -1.18
CPNE1-225ENST00000483495 ATP5EP56381 51 aaPredicted RBP7.7□□□□□ -1.18
CPNE1-225ENST00000483495 A0A1B0GVX0 72 aa7.69□□□□□ -1.18
CPNE1-225ENST00000483495 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
CPNE1-225ENST00000483495 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
CPNE1-225ENST00000483495 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
CPNE1-225ENST00000483495 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms