RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 LEPROTO15243 131 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 SPINK1P00995 79 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 FCER1GP30273 86 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 POLR2KP53803 58 aaKnown RBP1.88□□□□□ -2.11
LRCH3-217ENST00000483442 CCL20P78556 96 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 PRLHP81277 87 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 FAM104BQ5XKR9 115 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 ADM2Q7Z4H4 148 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 KRTAP13-1Q8IUC0 172 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 AMN1Q8IY45 258 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 C9orf62Q8N4C0 152 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 TTTY13Q9BZ97 58 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 TRBV6-5A0A0K0K1A5 114 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 C9orf92A6NGG3 77 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 CCDC179H3BU77 68 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 HBBP68871 147 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 LINC01554Q52M75 96 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 COL5A1-AS1Q5SY13 56 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 Q6ZUT4 128 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 PCP2Q8IVA1 136 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 SNHG12Q9BXW3 62 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 TMEM191AQ9H0A3 160 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 OSTCQ9NRP0 149 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 TOMM7Q9P0U1 55 aa1.87□□□□□ -2.11
LRCH3-217ENST00000483442 IGKV2-28A0A075B6P5 120 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 TRBV7-6A0A0J9YX20 115 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 TRBV27A0A0K0K1C4 114 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 BPY2O14599 106 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 SLC25A20O43772 301 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 IGKV2D-28P01615 120 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 TSPEAR-AS2P59090 65 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 RPL39P62891 51 aaKnown RBP1.86□□□□□ -2.11
LRCH3-217ENST00000483442 HSD52Q0P140 79 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 MRPL51Q4U2R6 128 aaKnown RBP1.86□□□□□ -2.11
LRCH3-217ENST00000483442 RPL7L1Q6DKI1 246 aaKnown RBP1.86□□□□□ -2.11
LRCH3-217ENST00000483442 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 LINC00846Q9NV44 126 aa1.86□□□□□ -2.11
LRCH3-217ENST00000483442 TMEM223A0PJW6 202 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 A8MWP4 228 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 HIST1H2BKO60814 126 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 HIST1H2BJP06899 126 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 SOSTDC1Q6X4U4 206 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 HIST3H2BBQ8N257 126 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 FAM19A2Q8N3H0 131 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 KCNRGQ8N5I3 272 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 PRELID3AQ96N28 172 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 HIST1H2BLQ99880 126 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 MIEN1Q9BRT3 115 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 TIMM21Q9BVV7 248 aa1.85□□□□□ -2.11
LRCH3-217ENST00000483442 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
LRCH3-217ENST00000483442 A0A0B4J2C4 111 aa1.84□□□□□ -2.11
LRCH3-217ENST00000483442 A0A1B0GW54 56 aa1.84□□□□□ -2.11
LRCH3-217ENST00000483442 HIST1H4AP62805 103 aaKnown RBP1.84□□□□□ -2.11
LRCH3-217ENST00000483442 Q5BKY6 102 aa1.84□□□□□ -2.11
LRCH3-217ENST00000483442 CLLU1Q5K131 121 aa1.84□□□□□ -2.11
LRCH3-217ENST00000483442 C10orf91Q5T1B1 145 aa1.84□□□□□ -2.11
LRCH3-217ENST00000483442 MRPL54Q6P161 138 aaKnown RBP1.84□□□□□ -2.11
LRCH3-217ENST00000483442 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
LRCH3-217ENST00000483442 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
LRCH3-217ENST00000483442 FLGP20930 4061 aaPredicted RBP1.83□□□□□ -2.12
LRCH3-217ENST00000483442 H3BT86 120 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 SPINK8P0C7L1 97 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 KRTAP10-10P60014 251 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 MRPS36P82909 103 aaKnown RBP1.83□□□□□ -2.12
LRCH3-217ENST00000483442 C7orf65Q6ZTY9 151 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 SVBPQ8N300 66 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 FAM213BQ8TBF2 198 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 SMCR5Q8TEV8 140 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 PRO1933Q9H354 126 aa1.83□□□□□ -2.12
LRCH3-217ENST00000483442 TRBV24-1A0A075B6N3 115 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 F8VRH5 84 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 IGLV6-57P01721 117 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 HBDP02042 147 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 MT2AP02795 61 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 TMEM258P61165 79 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 RPS29P62273 56 aaKnown RBP1.82□□□□□ -2.12
LRCH3-217ENST00000483442 MOBPQ13875 183 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 C9orf153Q5TBE3 101 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 Q8IZM0 81 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 SCGB3A1Q96QR1 104 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 SEC11CQ9BY50 192 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 MED9Q9NWA0 146 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 GNG13Q9P2W3 67 aa1.82□□□□□ -2.12
LRCH3-217ENST00000483442 FXYD6-FXYD2A0A087WZ82 144 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 UQCRQO14949 82 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 PPP1R17O96001 155 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 MT1FP04733 61 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 IFITM1P13164 125 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 IFI27P40305 119 aaPredicted RBP1.81□□□□□ -2.12
LRCH3-217ENST00000483442 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 C2orf91Q6ZV80 131 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 TEN1Q86WV5 123 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 TRAPPC1Q9Y5R8 145 aa1.81□□□□□ -2.12
LRCH3-217ENST00000483442 A0A1B0GUT8 65 aa1.8□□□□□ -2.12
LRCH3-217ENST00000483442 TIMM17BO60830 172 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms