RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DPM2O94777 84 aa3.17□□□□□ -1.9
CSDE1-207ENST00000483407 APOC3P02656 99 aa3.17□□□□□ -1.9
CSDE1-207ENST00000483407 SPRR1BP22528 89 aa3.17□□□□□ -1.9
CSDE1-207ENST00000483407 SVBPQ8N300 66 aa3.17□□□□□ -1.9
CSDE1-207ENST00000483407 MTURNQ8N3F0 131 aa3.17□□□□□ -1.9
CSDE1-207ENST00000483407 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
CSDE1-207ENST00000483407 IGKCP01834 107 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 SEC61GP60059 68 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 NPC2P61916 151 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 CD164Q04900 197 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 COX6B2Q6YFQ2 88 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 OR13C6PQ8NH95 151 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
CSDE1-207ENST00000483407 TAL2Q16559 108 aa3.15□□□□□ -1.91
CSDE1-207ENST00000483407 SOSTDC1Q6X4U4 206 aa3.15□□□□□ -1.91
CSDE1-207ENST00000483407 PRO1933Q9H354 126 aa3.15□□□□□ -1.91
CSDE1-207ENST00000483407 SPANXCQ9NY87 97 aa3.15□□□□□ -1.91
CSDE1-207ENST00000483407 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
CSDE1-207ENST00000483407 A0A0J9YXY3 114 aa3.14□□□□□ -1.91
CSDE1-207ENST00000483407 H7C2G1 150 aa3.14□□□□□ -1.91
CSDE1-207ENST00000483407 SERF1AO75920 110 aa3.14□□□□□ -1.91
CSDE1-207ENST00000483407 PMCHL2Q9BQD1 86 aa3.14□□□□□ -1.91
CSDE1-207ENST00000483407 SPANXDQ9BXN6 97 aa3.14□□□□□ -1.91
CSDE1-207ENST00000483407 TEX49A0A1B0GTD5 131 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 FABP4P15090 132 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 COX7BP24311 80 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 AKR1D1P51857 326 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 DSCR10P59022 87 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 ELOF1P60002 83 aaKnown RBP3.13□□□□□ -1.91
CSDE1-207ENST00000483407 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
CSDE1-207ENST00000483407 C6orf99Q4VX62 202 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 Q5XG85 94 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 DEFB105AQ8NG35 78 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 LINC00308Q8TCZ7 52 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 YPEL4Q96NS1 127 aa3.13□□□□□ -1.91
CSDE1-207ENST00000483407 TIMM17BO60830 172 aa3.12□□□□□ -1.91
CSDE1-207ENST00000483407 TRGC2P03986 189 aa3.12□□□□□ -1.91
CSDE1-207ENST00000483407 C1orf195Q5TG92 126 aa3.12□□□□□ -1.91
CSDE1-207ENST00000483407 USH2AO75445 5202 aa3.12□□□□□ -1.91
CSDE1-207ENST00000483407 TCL1BO95988 128 aa3.11□□□□□ -1.91
CSDE1-207ENST00000483407 TRBV7-6A0A0J9YX20 115 aa3.1□□□□□ -1.91
CSDE1-207ENST00000483407 ZNF815PA8K554 130 aa3.1□□□□□ -1.91
CSDE1-207ENST00000483407 IGLV5-48A0A075B6I7 105 aa3.09□□□□□ -1.91
CSDE1-207ENST00000483407 COPS9Q8WXC6 57 aa3.09□□□□□ -1.91
CSDE1-207ENST00000483407 NHP2Q9NX24 153 aaKnown RBP3.09□□□□□ -1.91
CSDE1-207ENST00000483407 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.92
CSDE1-207ENST00000483407 A6NDN8 102 aa3.08□□□□□ -1.92
CSDE1-207ENST00000483407 F8WEM9 126 aa3.08□□□□□ -1.92
CSDE1-207ENST00000483407 SYS1-DBNDD2H3BUS1 97 aa3.08□□□□□ -1.92
CSDE1-207ENST00000483407 Q6Q795 121 aa3.08□□□□□ -1.92
CSDE1-207ENST00000483407 SCGB1D4Q6XE38 83 aa3.08□□□□□ -1.92
CSDE1-207ENST00000483407 A0A0G2JQZ4 141 aa3.07□□□□□ -1.92
CSDE1-207ENST00000483407 ATP11AUNQ6ZP68 121 aa3.07□□□□□ -1.92
CSDE1-207ENST00000483407 PCP2Q8IVA1 136 aa3.07□□□□□ -1.92
CSDE1-207ENST00000483407 IFITM1P13164 125 aa3.06□□□□□ -1.92
CSDE1-207ENST00000483407 LINC01545Q5VT33 79 aa3.06□□□□□ -1.92
CSDE1-207ENST00000483407 CEND1Q8N111 149 aa3.06□□□□□ -1.92
CSDE1-207ENST00000483407 HIST1H4GQ99525 98 aa3.06□□□□□ -1.92
CSDE1-207ENST00000483407 TTTY13Q9BZ97 58 aa3.06□□□□□ -1.92
CSDE1-207ENST00000483407 TRAV13-2A0A0B4J235 113 aa3.05□□□□□ -1.92
CSDE1-207ENST00000483407 VAMP3Q15836 100 aa3.05□□□□□ -1.92
CSDE1-207ENST00000483407 Q6ZVH6 145 aa3.05□□□□□ -1.92
CSDE1-207ENST00000483407 Q6JHZ5 121 aa3.04□□□□□ -1.92
CSDE1-207ENST00000483407 SLC7A5P1Q8MH63 180 aa3.04□□□□□ -1.92
CSDE1-207ENST00000483407 CLEC2BQ92478 149 aa3.04□□□□□ -1.92
CSDE1-207ENST00000483407 OBSCN-AS1Q96MR7 158 aa3.04□□□□□ -1.92
CSDE1-207ENST00000483407 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
CSDE1-207ENST00000483407 TRBV20-1A0A075B6N2 111 aa3.03□□□□□ -1.92
CSDE1-207ENST00000483407 TRBV7-7A0A0K0K1E9 115 aa3.03□□□□□ -1.92
CSDE1-207ENST00000483407 C20orf202A1L168 122 aa3.03□□□□□ -1.92
CSDE1-207ENST00000483407 COLCA2A8K830 154 aa3.03□□□□□ -1.92
CSDE1-207ENST00000483407 MUSTN1Q8IVN3 82 aa3.03□□□□□ -1.92
CSDE1-207ENST00000483407 SMIM11BQ8TCY0 68 aa3.03□□□□□ -1.92
CSDE1-207ENST00000483407 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BKO60814 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BJP06899 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 C3orf79P0CE67 100 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BOP23527 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BBP33778 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BDP58876 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 KRTDAPP60985 99 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BCP62807 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST2H2BEQ16778 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-207ENST00000483407 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BHQ93079 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BNQ99877 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 HIST1H2BMQ99879 126 aa3.02□□□□□ -1.93
CSDE1-207ENST00000483407 hADV29S1A0JD25 119 aa3.01□□□□□ -1.93
CSDE1-207ENST00000483407 LST1O00453 97 aa3.01□□□□□ -1.93
CSDE1-207ENST00000483407 OCIAD2Q56VL3 154 aa3.01□□□□□ -1.93
CSDE1-207ENST00000483407 LINC00575Q6W349 94 aa3.01□□□□□ -1.93
CSDE1-207ENST00000483407 Q6ZQY7 126 aa3.01□□□□□ -1.93
CSDE1-207ENST00000483407 Q96NJ1 140 aa3.01□□□□□ -1.93
CSDE1-207ENST00000483407 NEBP20929 6669 aa3□□□□□ -1.93
CSDE1-207ENST00000483407 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
CSDE1-207ENST00000483407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-207ENST00000483407 ATOH7Q8N100 152 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms